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991.
Defective S phase chromatin assembly causes DNA damage,activation of the S phase checkpoint,and S phase arrest 总被引:1,自引:0,他引:1
The S phase checkpoint protects the genome from spontaneous damage during DNA replication, although the cause of damage has been unknown. We used a dominant-negative mutant of a subunit of CAF-I, a complex that assembles newly synthesized DNA into nucleosomes, to inhibit S phase chromatin assembly and found that this induced S phase arrest. Arrest was accompanied by DNA damage and S phase checkpoint activation and required ATR or ATM kinase activity. These results show that in human cells CAF-I activity is required for completion of S phase and that a defect in chromatin assembly can itself induce DNA damage. We propose that errors in chromatin assembly, occurring spontaneously or caused by genetic mutations or environmental agents, contribute to genome instability. 相似文献
992.
Ainsley JA Pettus JM Bosenko D Gerstein CE Zinkevich N Anderson MG Adams CM Welsh MJ Johnson WA 《Current biology : CB》2003,13(17):1557-1563
Coordination of rhythmic locomotion depends upon a precisely balanced interplay between central and peripheral control mechanisms. Although poorly understood, peripheral proprioceptive mechanosensory input is thought to provide information about body position for moment-to-moment modifications of central mechanisms mediating rhythmic motor output. Pickpocket1 (PPK1) is a Drosophila subunit of the epithelial sodium channel (ENaC) family displaying limited expression in multiple dendritic (md) sensory neurons tiling the larval body wall and a small number of bipolar neurons in the upper brain. ppk1 null mutant larvae had normal external touch sensation and md neuron morphology but displayed striking alterations in crawling behavior. Loss of PPK1 function caused an increase in crawling speed and an unusual straight path with decreased stops and turns relative to wild-type. This enhanced locomotion resulted from sustained peristaltic contraction wave cycling at higher frequency with a significant decrease in pause period between contraction cycles. The mutant phenotype was rescued by a wild-type PPK1 transgene and duplicated by expressing a ppk1RNAi transgene or a dominant-negative PPK1 isoform. These results demonstrate that the PPK1 channel plays an essential role in controlling rhythmic locomotion and provide a powerful genetic model system for further analysis of central and peripheral control mechanisms and their role in movement disorders. 相似文献
993.
Salehzadeh A Akhkha A Cushley W Adams RL Kusel JR Strang RH 《Insect biochemistry and molecular biology》2003,33(7):681-689
When cultured insect cells (Sf9) were grown in the presence of 5 x 10(-6) M azadirachtin, there was a rapid increase in the mitotic index, with the appearance of many aberrant mitotic figures. Flow cytometry established that cells accumulated in the G2/M phase of the cell cycle, and that the effect was concentration-dependent. At 10(-8) M a period of 20 h was necessary to raise the proportion in G2/M to 42% above the control values, but at 5 x 10(-6) M more than 90% of the cells were in this phase. Azadirachtin had the same effect on C6/36 mosquito cells, but failed to affect L929 murine fibroblast cells even at a concentration of 10(-4) M over 72 h. Experiments with colchcine and taxol showed similarities of action between azadirachtin and colchicine, and azadirachtin was apparently able to displace colchicine-fluorescein from binding-sites in living insect cells. Another similarity between azdirachtin and colchicine was that both phytochemicals prevented the polymerisatrion in vitro of mammalian tubulin, although the azadirachtin was much less effective. 相似文献
994.
Singh U Raju B Lam S Zhou J Gadwood RC Ford CW Zurenko GE Schaadt RD Morin SE Adams WJ Friis JM Courtney M Palandra J Hackbarth CJ Lopez S Wu C Mortell KH Trias J Yuan Z Patel DV Gordeev MF 《Bioorganic & medicinal chemistry letters》2003,13(23):4209-4212
Combinatorial libraries of N-acylated 5-(S)-aminomethyloxazolidinone derivatives of S-oxide and S,S-dioxide tetrahydro-4(2H)-thiopyranyl and thiomorpholine phenyloxazolidinone series have been synthesized on a solid phase and evaluated for antimicrobial activity. Several novel potent leads have been identified, including orally active oxazolidinones with enhanced activity against respiratory tract infection pathogens Haemophilus influenzae and Moraxella catarrhalis. 相似文献
995.
996.
Jessie Lilly Hannele H. Honkanen Jessica R. Rodger Diego del Villar Patrick Boylan Amy Green Diego Pereiro Lorna Wilkie Richard Kennedy Andrea Barkley Robert Rosell Niall Ó. Maoiléidigh Ross O'Neill Catherine Waters Deirdre Cotter David Bailey William Roche Ross McGill James Barry Samantha V. Beck Jim Henderson Debbie Parke Frederick G. Whoriskey Brian Shields Philip Ramsden Silas Walton Melanie Fletcher Ken Whelan Colin W. Bean Sophie Elliott Adrian Bowman Colin E. Adams 《Journal of fish biology》2024,104(1):265-283
The freshwater phase of the first seaward migration of juvenile Atlantic salmon (Salmo salar) is relatively well understood when compared with our understanding of the marine phase of their migration. In 2021, 1008 wild and 60 ranched Atlantic salmon smolts were tagged with acoustic transmitters in 12 rivers in England, Scotland, Northern Ireland and Ireland. Large marine receiver arrays were deployed in the Irish Sea at two locations: at the transition of the Irish Sea into the North Atlantic between Ireland and Scotland, and between southern Scotland and Northern Ireland, to examine the early phase of the marine migration of Atlantic salmon smolts. After leaving their natal rivers' post-smolt migration through the Irish Sea was rapid with minimum speeds ranging from 14.03 to 38.56 km.day−1 for Atlantic salmon smolts that entered the Irish Sea directly from their natal river, to 9.69–39.94 km.day−1 for Atlantic salmon smolts that entered the Irish Sea directly from their natal estuary. Population minimum migration success through the study area was strongly correlated with the distance of travel, populations further away from the point of entry to the open North Atlantic exhibited lower migration success. Post-smolts from different populations experienced different water temperatures on entering the North Atlantic. This was largely driven by the timing of their migration and may have significant consequences for feeding and ultimately survivorship. The influence of water currents on post-smolt movement was investigated using data from previously constructed numerical hydrodynamic models. Modeled water current data in the northern Irish Sea showed that post-smolts had a strong preference for migrating when the current direction was at around 283° (west-north-west) but did not migrate when exposed to strong currents in other directions. This is the most favorable direction for onward passage from the Irish Sea to the continental shelf edge current, a known accumulation point for migrating post-smolts. These results strongly indicate that post-smolts migrating through the coastal marine environment are: (1) not simply migrating by current following (2) engage in active directional swimming (3) have an intrinsic sense of their migration direction and (4) can use cues other than water current direction to orientate during this part of their migration. 相似文献
997.
M. N. Amin R. Katersky Barnes L. R. Adams 《Zeitschrift fur angewandte Ichthyologie》2014,30(2):340-349
A 12‐week feeding trial was conducted to determine the optimum dietary protein requirement of brook trout, Salvelinus fontinalis, at 15 and 19°C. Twelve iso‐energetic (22 MJ · kg?1) and iso‐lipidic (23%) diets (36–58% protein at 2% increments) were prepared. Fish (29.45 ± 3.25 g · fish?1) were fed 2% of body weight per day, divided into two equal rations. The specific growth rate (SGR, % · day?1), feed efficiency ratio (FER), productive protein value (PPV), productive lipid value (PLV) and productive energy value (PEV), apparent digestibility of diet (ADDM) and protein (ADCP) were significantly higher at optimum temperature (15°C). Increasing PPV with increasing dietary carbohydrate and with decreasing dietary protein content was due to the protein‐sparing effect of carbohydrates. A piecewise regression (broken line) model between the SGR and digestible dietary protein level revealed that the digestible dietary protein requirement of brook trout was 44 and 40% at 15 and 19°C, respectively. When PPV (digestible protein retention basis) was modelled with a broken line, the digestible protein requirement of brook trout was 39 and 35% at 15 and 19°C, respectively. A reduction in dietary protein content balanced by increased gelatinised carbohydrate might be useful for improving the protein utilization efficiency for growth at 15 and 19°C; however, the growth and feed efficiency was lower at the elevated temperature. 相似文献
998.
Andrew Y. Li Michael Crone Peter J. Adams Stanley G. Fenwick Giles E. S. J. Hardy Nari Williams 《Journal of Phytopathology》2014,162(11-12):747-757
The microscopic examination of Phytophthora cinnamomi in plant tissues is often difficult as structures such as hyphae, chlamydospores and oospores are frequently indistinguishable from those of other fungi and oomycetes, with histological stains not enabling species differentiation. This lack of staining specificity makes the localization of P. cinnamomi hyphae and reproductive structures within plant tissues difficult, especially in woody tissues. This study demonstrates that with the use of a species‐specific fluorescently labelled DNA probe, P. cinnamomi can be specifically detected and visualized directly using fluorescent in situ hybridization (FISH) without damage to plant or pathogen cell integrity or the need for subculturing. This approach provides a new application for FISH with potential use in the detailed study of plant–pathogen interactions in plants. 相似文献
999.
Amit Ghosh Jerome Nilmeier Daniel Weaver Paul D. Adams Jay D. Keasling Aindrila Mukhopadhyay Christopher J. Petzold Héctor García Martín 《PLoS computational biology》2014,10(9)
The study of intracellular metabolic fluxes and inter-species metabolite exchange for microbial communities is of crucial importance to understand and predict their behaviour. The most authoritative method of measuring intracellular fluxes, 13C Metabolic Flux Analysis (13C MFA), uses the labeling pattern obtained from metabolites (typically amino acids) during 13C labeling experiments to derive intracellular fluxes. However, these metabolite labeling patterns cannot easily be obtained for each of the members of the community. Here we propose a new type of 13C MFA that infers fluxes based on peptide labeling, instead of amino acid labeling. The advantage of this method resides in the fact that the peptide sequence can be used to identify the microbial species it originates from and, simultaneously, the peptide labeling can be used to infer intracellular metabolic fluxes. Peptide identity and labeling patterns can be obtained in a high-throughput manner from modern proteomics techniques. We show that, using this method, it is theoretically possible to recover intracellular metabolic fluxes in the same way as through the standard amino acid based 13C MFA, and quantify the amount of information lost as a consequence of using peptides instead of amino acids. We show that by using a relatively small number of peptides we can counter this information loss. We computationally tested this method with a well-characterized simple microbial community consisting of two species. 相似文献
1000.
Gretchen H. Roffler Sandra L. Talbot Gordon Luikart George K. Sage Kristy L. Pilgrim Layne G. Adams Michael K. Schwartz 《Conservation Genetics》2014,15(4):837-851
Identifying patterns of fine-scale genetic structure in natural populations can advance understanding of critical ecological processes such as dispersal and gene flow across heterogeneous landscapes. Alpine ungulates generally exhibit high levels of genetic structure due to female philopatry and patchy configuration of mountain habitats. We assessed the spatial scale of genetic structure and the amount of gene flow in 301 Dall’s sheep (Ovis dalli dalli) at the landscape level using 15 nuclear microsatellites and 473 base pairs of the mitochondrial (mtDNA) control region. Dall’s sheep exhibited significant genetic structure within contiguous mountain ranges, but mtDNA structure occurred at a broader geographic scale than nuclear DNA within the study area, and mtDNA structure for other North American mountain sheep populations. No evidence of male-mediated gene flow or greater philopatry of females was observed; there was little difference between markers with different modes of inheritance (pairwise nuclear DNA F ST = 0.004–0.325; mtDNA F ST = 0.009–0.544), and males were no more likely than females to be recent immigrants. Historical patterns based on mtDNA indicate separate northern and southern lineages and a pattern of expansion following regional glacial retreat. Boundaries of genetic clusters aligned geographically with prominent mountain ranges, icefields, and major river valleys based on Bayesian and hierarchical modeling of microsatellite and mtDNA data. Our results suggest that fine-scale genetic structure in Dall’s sheep is influenced by limited dispersal, and structure may be weaker in populations occurring near ancestral levels of density and distribution in continuous habitats compared to other alpine ungulates that have experienced declines and marked habitat fragmentation. 相似文献