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991.
Characterization of trinucleotide SSR motifs in wheat 总被引:21,自引:0,他引:21
Song QJ Fickus EW Cregan PB 《TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik》2002,104(2-3):286-293
Length differences among trinucleotide-based microsatellite alleles can be more easily detected and frequently produce fewer
”stutter bands” as compared to dinucleotide-based microsatellite markers. Our objective was to determine which trinucleotide
motif(s) would be the most-polymorphic and abundant source of trinucleotide microsatellite markers in wheat (Triticum aestivum L.). Four genomic libraries of cultivar ’Chinese Spring’ were screened with nine trinucleotide probes. Based on the screening
of 28550 clones, the occurrences of (CTT/GAA)
n
, (GGA/CCT)
n
, (TAA/ATT)
n
, (CAA/GTT)
n
, (GGT/CCA)
n
, (CAT/GTA)
n
, (CGA/GCT)
n
, (CTA/GAT)
n
, and (CGT/GCA)
n
repeats were estimated to be 5.4×104, 3.5×104, 3.2×104, 1.2×104, 6.3×103, 4.9×103, 4.5×103, 4.5×103 and 3.6×103, i.e., once every 293 kbp, 456 kbp, 500 kbp, 1.3 Mbp, 2.6 Mbp, 3.2 Mbp, 3.6 Mbp, 3.6 Mbp and 4.5 Mbp in the wheat genome,
respectively. Of 236 clones selected for sequencing, 38 (93%) (TAA/ATT)
n
, 30 (43%) (CTT/GAA)
n
, 16 (59%) (CAA/GTT)
n
, 3 (27%) (CAT/GTA)
n
and 2 (4%) (GGA/CCT)
n
clones contained microsatellites with eight or more perfect repeats. From these data, 29, 27 and 16 PCR primer sets were
designed and tested to the (TAA/ATT)
n
, (CTT/GAA)
n
and (CAA/GTT)
n
microsatellites, respectively. A total of 12 (41.4%) primers designed to (TAA/ATT)
n
, four (14.8%) to (CTT/GAA)
n
, and two (12.5%) to (CAA/GTT)
n
resulted in polymorphic markers. The results indicated that (TAA/ATT)
n
microsatellites would provide the most-abundant and the most-polymorphic source of trinucleotide microsatellite markers in
wheat.
Received: 17 February 2001 / Accepted: 31 May 2001 相似文献
992.
James J. Smith Thomas H.Q. Powell Luis Teixeira William O. Armstrong Robert J. McClowry Rufus Isaacs Glen R. Hood Jeffrey L. Feder Larry Gut 《Entomologia Experimentalis et Applicata》2014,150(2):157-165
The cherry fruit fly (CFF), Rhagoletis cingulata Loew (Diptera: Tephritidae: Trypetini), is endemic to eastern North America and Mexico, where its primary native host is black cherry [Prunus serotina Ehrh. (Rosaceae)]. Cherry fruit fly is also a major economic pest of the fruit of cultivated sweet (Prunus avium L.) and tart (Prunus cerasus L.) cherries. Adult CFF that attack wild black cherry and introduced, domesticated cherries in commercial and abandoned orchards are active at different times of the summer, potentially generating allochronic isolation that could genetically differentiate native from sweet and tart CFF populations. Here, we test for host‐related genetic differences among CFF populations in Michigan attacking cherries in managed, unmanaged, and native habitats by scoring flies for 10 microsatellite loci. Little evidence for genetic differentiation was found across the three habitats or between the northern and southern Michigan CFF populations surveyed in the study. Local gene flow between native black cherry, commercial, and abandoned orchards may therefore be sufficient to overcome seasonal differences in adult CFF activity and prevent differentiation for microsatellites not directly associated with (tightly linked to) genes affecting eclosion time. The results do not support the existence of host‐associated races in CFF and imply that flies attacking native, managed, and unmanaged cherries should be considered to represent a single population for pest management purposes. 相似文献
993.
The cell cycle of donor cells as a major factor that affects cloning efficiency remains debatable. G2/M phase cells as a donor can successfully produce cloned animals, but a minimal amount is known regarding nuclear remodeling events. In this study, porcine fetal fibroblasts (PFFs) were carefully synchronized at G1 or M phase as donor cells. Most of the cloned embryos reconstructed from PFFs at G1 (G1-embryos) or M (M-embryos) phase formed a pronucleus-like nucleus (PN) within 6-h post fusion (hpf), but the M-embryos formed PN earlier than the G1-embryos did. Moreover, 77.4% of the M-embryos formed two PNs, whereas the G1-embryos formed a single PN. The rate of extrusion of polar body-like structures by the M-embryos was significantly lower than that extruded by the G1-embryos (26.3% vs. 37.1%, P?0.05), and DNA synthesis in most embryos in both groups was initiated at 9–12 hpf. Most of the M-embryos were octoploid before the first cleavage. Furthermore, 81.25% of the blastomeres of blastocysts developed from the M-embryos showed abnormal ploidy compared with those developed from the G1-embryos (22.55%). However, some of the blastomeres remained diploid in all the M-embryos tested. A portion of the blastomeres restored normal diploidy in some of the M-embryos at the blastocyst stage. This finding provides an explanation for M-embryos developing to term. 相似文献
994.
995.
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998.
Pablo A. P. Antiqueira Paula M. de Omena Thiago Gonalves-Souza Camila Vieira Gustavo H. Migliorini Mnica F. Kersch-Becker Tiago N. Bernab Ftima C. Recalde Sandra Benavides- Gordillo Gustavo Q. Romero 《Oecologia》2020,192(3):745-753
Biotic and abiotic factors may individually or interactively disrupt plant–pollinator interactions, influencing plant fitness. Although variations in temperature and precipitation are expected to modify the overall impact of predators on plant–pollinator interactions, few empirical studies have assessed if these weather conditions influence anti-predator behaviors and how this context-dependent response may cascade down to plant fitness. To answer this question, we manipulated predation risk (using artificial spiders) in different years to investigate how natural variation in temperature and precipitation may affect diversity (richness and composition) and behavioral (visitation) responses of flower-visiting insects to predation risk, and how these effects influence plant fitness. Our findings indicate that predation risk and an increase in precipitation independently reduced plant fitness (i.e., seed set) by decreasing flower visitation. Predation risk reduced pollinator visitation and richness, and altered species composition of pollinators. Additionally, an increase in precipitation was associated with lower flower visitation and pollinator richness but did not alter pollinator species composition. However, maximum daily temperature did not affect any component of the pollinator assemblage or plant fitness. Our results indicate that biotic and abiotic drivers have different impacts on pollinator behavior and diversity with consequences for plant fitness components. Even small variation in precipitation conditions promotes complex and substantial cascading effects on plants by affecting both pollinator communities and the outcome of plant–pollinator interactions. Tropical communities are expected to be highly susceptible to climatic changes, and these changes may have drastic consequences for biotic interactions in the tropics. 相似文献
999.
Studies on the aflatoxins, toxic metabolites of Aspergillus flavus and A. parasiticus, have involved test systems ranging from cell cultures to laboratory animals. This work reports on the differential response by sex of Oncopeltus fasciatus to aflatoxin B1 (AFB1). Young adult milkweed bugs were chosen randomly from our stock colony and housed in glass culture jars. Triplicate sets of experimental animals were fed 5 μg/ml of AFB1 in their liquid diet. The first death for the experimental females occurred at day 4, and at 10 days for the experimental males. A 50% lethality level for experimental females developed by day 8. Males subjected to the same concentration achieved a 50% lethality level at day 24. For the females the LD50 occurred after consuming 0.49 μg/ml of AFB1. The results indicate that adult female milkweed bugs were hypersensitive to AFB1 as compared to adult males. This organism is more sensitive than the American cockroach and less sensitive than the fruitfly, housefly, and honeybee to toxic aflatoxicosis. Even the female is not sufficiently sensitive to rate highly as a bioassay organism for AFB1. The extreme difference in mortality between the sexes is significant, unusual, and unexplained. 相似文献
1000.
Because alveolar hypoxia (HYP) triggers pulmonary mast cell degranulation with elaboration of vasoactive mediators such as leukotrienes, we investigated the effects of aerosolized cromolyn sodium (CS), a mast cell stabilizing agent, and U-60,257(U) (a leukotriene blocker) on the circulation, lung mechanics and thromboxane (TXB2) levels in 11 lambs during acute exposure to HYP. Studies were performed in awake, chronically instrumented animals, once after placebo (saline) and again after CS (100 mg; n = 5) or U (90 mg; n = 6). Pulmonary arterial pressure increased 42% during HYP after saline, and 32% and 19% after CS and U, respectively. Pulmonary vascular resistance did not change during HYP after CS or U. Systemic arterial pressure was unchanged after saline and CS but decreased after U; systemic vascular resistance dropped after both CS and U. No changes were seen in tidal volume, lung compliance or airway resistance during HYP after saline or either drug, but minute ventilation increased during HYP in all studies. TXB2 increased during HYP after saline in both studies and was not altered by CS. In contrast, after U, TXB2 decreased. Thus, U more effectively blunted the pulmonary vascular response to HYP than CS and resulted in mild systemic hypotension. The drop in TXB2 after U suggests leukotriene-induced thromboxane synthesis contributes to regulation of pulmonary, and possibly, systemic vasoactivity. 相似文献