Ecosystem feedbacks and cascade processes: understanding their role in the responses of Arctic and alpine ecosystems to environmental change

Global environmental change, related to climate change and the deposition of airborne N‐containing contaminants, has already resulted in shifts in plant community composition among plant functional types in Arctic and temperate alpine regions. In this paper, we review how key ecosystem processes will be altered by these transformations, the complex biological cascades and feedbacks that might result, and some of the potential broader consequences for the earth system. Firstly, we consider how patterns of growth and allocation, and nutrient uptake, will be altered by the shifts in plant dominance. The ways in which these changes may disproportionately affect the consumer communities, and rates of decomposition, are then discussed. We show that the occurrence of a broad spectrum of plant growth forms in these regions (from cryptogams to deciduous and evergreen dwarf shrubs, graminoids and forbs), together with hypothesized low functional redundancy, will mean that shifts in plant dominance result in a complex series of biotic cascades, couplings and feedbacks which are supplemental to the direct responses of ecosystem components to the primary global change drivers. The nature of these complex interactions is highlighted using the example of the climate‐driven increase in shrub cover in low‐Arctic tundra, and the contrasting transformations in plant functional composition in mid‐latitude alpine systems. Finally, the potential effects of the transformations on ecosystem properties and processes that link with the earth system are reviewed. We conclude that the effects of global change on these ecosystems, and potential climate‐change feedbacks, cannot be predicted from simple empirical relationships between processes and driving variables. Rather, the effects of changes in species distributions and dominances on key ecosystem processes and properties must also be considered, based upon best estimates of the trajectories of key transformations, their magnitude and rates of change.     

Population Growth and Demography of Common Loons in the Northern United States

ABSTRACT We used recent developments in theoretical population ecology to construct basic models of common loon (Gavia immer) demography and population dynamics. We parameterized these models using existing survival estimates and data from long-term monitoring of loon productivity and abundance. Our models include deterministic, 2-stage, density-independent matrix models, yielding population growth-rate estimates (λ) of 0.99 and 1.01 for intensively studied populations in our Wisconsin, USA, and New Hampshire, USA, study areas, respectively. Perturbation analysis of these models indicated that estimated growth rate is extremely sensitive to adult survival, as expected for this long-lived species. Also, we examined 20 years of count data for the 2 areas and evaluated support for a set of count-based models of population growth. We detected no temporal trend in Wisconsin, which would be consistent with fluctuation around an average equilibrium state but could also result from data limitations. For New Hampshire, the model set included varying formulations of density dependence and partitioning of stochasticity that were enabled by the annual sampling resolution. The best model for New Hampshire included density regulation of population growth and, along with the demographic analyses for both areas, provided insight into the possible importance of breeding habitat availability and the abundance of nonbreeding adults. Based on these results, we recommend that conservation organizations include nonbreeder abundance in common loon monitoring efforts and that additional emphasis be placed on identifying and managing human influences on adult loon survival.     

A proteomic analysis of powdery mildew (Blumeria graminis f.sp. hordei) conidiospores

Conidiospores are the asexual propagation units of many plant-pathogenic fungi. In this article, we report an annotated proteome map of ungerminated conidiospores of the ascomycete barley powdery mildew pathogen, Blumeria graminis f.sp. hordei . Using a combination of two-dimensional polyacrylamide gel electrophoresis and matrix-assisted laser desorption ionization-time-of-flight mass spectrometry, we have identified the proteins in 180 spots, which probably represent at least 123 distinct fungal gene products. Most of the identified proteins have a predicted function in carbohydrate, lipid or protein metabolism, indicating that the spore is equipped for the catabolism of storage compounds as well as for protein biosynthesis and folding on germination.     

A population on the edge: genetic diversity and population structure of the world's northernmost harbour seals (Phoca vitulina)

It is crucial to examine the genetic diversity and structure of small, isolated populations, especially those at the edge of their distribution range, because they are vulnerable to stochastic processes if genetic diversity is low and the isolation level is high, and because such populations provide insight into the consequences of population declines in a broader conservation context. The harbour seal (Phoca vitulina) population in Svalbard is the world's northernmost P. vitulina population. Nothing is known about the genetic diversity, distinctiveness, or origin of this small, marginalized mammalian population. Thus, the present study investigated its genetic status in the context of nearby P. vitulina in Iceland, south‐east Greenland, and northern Norway: this species is depleted/threatened in all of these regions. A total of 174 samples distributed between the four locations were analysed using 15 polymorphic microsatellites and variation in the displacement loop region (D‐loop). Each of the four locations was a genetically distinct population. The Svalbard population was highly genetically distinct, had reduced genetic diversity, received limited gene flow, had a rather low effective population size, and showed an indication of having experienced a bottleneck resulting from a recent population decline. The significant heterozygote excess observed in the Svalbard sample might be attributed to the low effective population size, which could initiate future population inbreeding effects. This phenomenon has not been reported earlier from other P. vitulina populations, but if the Svalbard population is experiencing inbreeding, this could reduce its resilience to climate change, disease outbreaks, or other perturbations. © 2011 The Linnean Society of London, Biological Journal of the Linnean Society, 2011, 102 , 420–439.     

Immunocompetent Infants as a Human Reservoir for Pneumocystis jirovecii: Rapid Screening by Non-Invasive Sampling and Real-Time PCR at the Mitochondria1 Large Subunit rRNA Gene

ABSTRACT. We tested a real-time PCR assay targeting the Pneumocystis jirovecii mitochondria1 large subunit rRNA gene on 240 archival nasopharyngeal aspirates from non-immunosuppressed infants. The sensitivity of this assay appeared close to that of a conventional nested-PCR assay targeting the same locus. Because of its one-step procedure, and its sensitivity and rapidity, the real-time PCR assay is particularly suitable for screening individuals parasitized by P. jirovecii within large populations.     

The impact of recreation on the ecology and amenity of semi- natural areas: methods of investigation used in the Isles of Scilly

Questionnaires in the form of maps were used in the Isles of Scilly with the aim of developing quantitative and objective techniques for studying the effects of visitors on semi-natural areas. Maps were prepared of intensity of visitor use and distribution of various activities; these were compared with maps of plant communities. In addition photographic, observational and electronic people-counter records were made along transects and compared with vegetation and soil data using partial correlation analysis. The results are discussed and indicate that questionnaire-maps and data from the recording devices provide a useful basis for making management proposals.     

Measuring the Canopy Net Photosynthesis of Glasshouse Crops

A null balance method is described for measuring net photosynthesisof mature canopies of cucumber and other protected crops overperiods of 10 min in a single-span glasshouse (c. 9m x 18m inarea). Accuracy of control of the CO₂ concentration in the greenhouseatmosphere is within ±10 vpm of the normal ambient level(c. 350 vpm). The amounts of CO₂ used in canopy net photosynthesisare measured with linear mass flowmeters accurate to within±0.80g. The total errors incurred in measuring canopynet photosynthesis at an ambient CO₂ level are estimated tobe of the order of ± 1·2% in bright light (350W m^–2, PAR)and ±3·6% in dull light (100W m^–2, PAR). Measurements of the rates of net photosynthesis of a maturecanopy of a cucumber crop were made at near-ambient CO₂ concentrationsover a range (0–350 W m^–2) of natural light fluxdensities. A model of light absorption and photosynthesis applicableto row crops was used to obtain a net photosynthesis versuslight response curve for the cucumber crop. At a light fluxdensity of 350 W m^–2 the fitted value of canopy net photosynthesiswas 2.65 mg CO₂ m^–2s^–1 (equivalent to over 95 kgCO₂ ha^–1h^–1). The results are discussed in relationto the need for CO₂ supplements to avoid depletion in both ventilatedand unventilated glasshouses during late spring and summer. Key words: Glasshouse crops, cucumber, measurement, canopy photosynthesis, light, CO₂     

Patterns of Root Respiration Associated with the Induction of Aluminium Tolerance in Phaseolus vulgaris L.

Aluminium (Al) tolerance in an Al-tolerant cultivar of Phaseolusvulgaris L. (‘Dade’) was found to be an inducibletrait. Upon exposure to 10 µM Al, the rate of root elongationwas inhibited in comparison to controls. During the following72 h, the rate of elongation returned to levels comparable tocontrols. In contrast, root elongation of an Al-sensitive cultivar(‘Romano’) did not recover after exposure to Al.In Dade, the resumption of root elongation following exposureto Al was accompanied by increased rates of root respiration,whereas respiration rates slowly declined over the 72 h treatmentperiod in Romano. When partitioned into growth and maintenanceexpenditures, a larger proportion of root respiration of Dadeexposed to Al was allocated to maintenance processes, potentiallyreflecting diversion of energy to metabolic pathways that offsetthe adverse effects of Al toxicity. Romano did not show sucha pattern and respiration associated with both growth and maintenancewas reduced after exposure to Al. Root and shoot growth of bothcultivars were also measured to determine the effects of long-term(21 d) exposure to 10 µM Al. Dade plants exposed to Alexhibited enhanced growth in comparison to controls, whereasRomano plants were characterized by reduced shoot and root growth.Modelling the time-course of root respiration and measuringthe long-term growth responses to Al is a valuable method ofelucidating respiratory costs of stress tolerance. Key words: Aluminium, differential tolerance, maintenance respiration, Phaseolus vulgaris, root respiration     

Modeling Global Macroclimatic Constraints on Ectotherm Energy Budgets

We describe a mechanistic individual-based model of how globalmacroclimatic constraints affect the energy budgets of ectothermicanimals. The model uses macroclimatic and biophysical charactersof the habitat and organism and tenets of heat transfer theoryto calculate hourly temperature availabilities over a year.Data on the temperature dependence of activity rate, metabolism,food consumption and food processing capacity are used to estimatethe net rate of resource assimilation which is then integratedover time. We detail and explore the significance of assumptionsused in these calculations. We present a new test of this model in which we show that thepredicted energy budget sizes for 11 populations of the lizardSceloporus undulalus are in close agreement with observed resultsfrom previous field studies. This demonstrates that model testsare feasible and the results are reasonable. Further, sincethe model represents an upper bound to the size of the energybudget, observed residual deviations form explicit predictionsabout the effects of environmental constraints on the bioenergeticsof the study lizards within each site that may be tested byfuture field and laboratory studies. Three major new improvements to our modeling are discussed.We present a means to estimate microclimate thermal heterogeneitymore realistically and include its effects on field rates ofindividual activity and food consumption. Second, we describean improved model of digestive function involving batch processingof consumed food. Third, we show how optimality methods (specificallythe methods of stochastic dynamic programming) may be includedto model the fitness consequences of energy allocation decisionssubject to food consumption and processing constraints whichare predicted from the microclimate and physiological modeling Individual-based models that incorporate macroclimatic constraintson individual resource acquisition, assimilation and allocationcan provide insights into theoretical investigations about theevolution of life histories in variable environments as wellas provide explicit predictions about individual, populationand community level responses to global climate change.