Plant‐mediated effects of host plant density on a specialist herbivore of Solanum carolinense

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Population Structure of the Lower Keys Marsh Rabbit as Determined by Mitochondrial DNA Analysis

ABSTRACT We used nucleotide sequence data from a mitochondrial DNA fragment to characterize variation within the endangered Lower Keys marsh rabbit (Sylvilagus palustris hefneri). We observed 5 unique mitochondrial haplotypes across different sampling sites in the Lower Florida Keys, USA. Based on the frequency of these haplotypes at different geographic locations and relationships among haplotypes, we observed 2 distinct clades or groups of sampling sites (western and eastern clades). These 2 groups showed low levels of gene flow. Regardless of their origin, marsh rabbits from the Lower Florida Keys can be separated into 2 genetically distinct management units, which should be considered prior to implementation of translocations as a means of offsetting recent population declines.     

Comprehensive assessment of carbon productivity, allocation and storage in three Amazonian forests

The allocation and cycling of carbon (C) within forests is an important component of the biospheric C cycle, but is particularly understudied within tropical forests. We synthesise reported and unpublished results from three lowland rainforest sites in Amazonia (in the regions of Manaus, Tapajós and Caxiuanã), all major sites of the Large‐Scale Biosphere–Atmosphere Programme (LBA). We attempt a comprehensive synthesis of the C stocks, nutrient status and, particularly, the allocation and internal C dynamics of all three sites. The calculated net primary productivities (NPP) are 10.1±1.4 Mg C ha⁻¹ yr⁻¹ (Manaus), 14.4±1.3 Mg C ha⁻¹ yr⁻¹ (Tapajós) and 10.0±1.2 Mg C ha⁻¹ yr⁻¹ (Caxiuanã). All errors bars report standard errors. Soil and leaf nutrient analyses indicate that Tapajós has significantly more plant‐available phosphorus and calcium. Autotrophic respiration at all three sites (14.9–21.4 Mg C ha yr⁻¹) is more challenging to measure, with the largest component and greatest source of uncertainty being leaf dark respiration. Comparison of measured soil respiration with that predicted from C cycling measurements provides an independent constraint. It shows general good agreement at all three sites, with perhaps some evidence for measured soil respiration being less than expected. Twenty to thirty percent of fixed C is allocated belowground. Comparison of gross primary productivity (GPP), derived from ecosystem flux measurements with that derived from component studies (NPP plus autotrophic respiration) provides an additional crosscheck. The two approaches are in good agreement, giving increased confidence in both approaches to estimating GPP. The ecosystem carbon‐use efficiency (CUEs), the ratio of NPP to GPP, is similar at Manaus (0.34±0.10) and Caxiuanã (0.32±0.07), but may be higher at Tapajós (0.49±0.16), although the difference is not significant. Old growth or infertile tropical forests may have low CUE compared with recently disturbed and/or fertile forests.     

Effects of freshwater shrimp assemblages on benthic communities along an altitudinal gradient of a tropical island stream

1. In tropical island stream ecosystems freshwater shrimps are often the dominant macroconsumers and can play an important role in determining benthic community composition. However, most studies of the ecological role of shrimps are limited to high‐altitude shrimp‐dominated sites where other biota (fishes and snails) are absent or significantly less abundant than at lower altitudes. 2. We examined how effects of different shrimp assemblages on benthic communities changed along an altitudinal gradient in a tropical island stream in Puerto Rico. We used electroshocking and observations to quantify abundance and taxonomic composition of shrimp assemblages at three sites (300, 90 and 10 m a. s. l) along the Río Espíritu Santo. We also experimentally manipulated access of shrimps to the benthic environment simultaneously at each site using electric fences over a 35‐day period. 3. At the high‐altitude site, exclusion of shrimps (predominantly Atya spp. and Xiphocariselongata) resulted in significantly greater accrual of organic and inorganic material, chlorophyll a and algal biovolume. In the absence of shrimps, the algal community was dominated by filamentous green algae (Chlorophyta: Oedogonium and Rhizoclonium). Excluding shrimps did not affect total insect biomass but significantly increased sessile chironomids (Diptera: Chironomidae). We observed similar treatment effects at the mid‐altitude site where shrimps (primarily Macrobrachium spp. and X. elongata) occurred at lower densities. In contrast, at the low‐altitude site there were no treatment differences in organic and inorganic material, chlorophyll a, algal biovolume, algal assemblage composition and insects. 4. The lack of treatment differences at the low‐altitude site was probably because of very high densities of grazing snails (Thiaragranifera and Neritina spp.) which reduced organic and inorganic resources and obscured potential shrimp effects. 5. This study demonstrates that freshwater shrimps can play an important role in determining benthic community composition; however, their effects vary and appear to depend on the presence of other biota. This study suggests that loss of shrimps as a result of anthropogenic disturbances will have different effects on the stream community depending upon location along the altitude gradient.     

Tadpoles enhance microbial activity and leaf decomposition in a neotropical headwater stream

1. Relationships between biodiversity and ecosystem function are of increasing interest, particularly in freshwater ecosystems where species losses are occurring at unprecedented rates. Amphibian declines have been associated with a loss of ecosystem function in neotropical streams, but little is known of the potential roles of stream‐dwelling tadpoles in leaf decomposition. Leaf litter is an important energy source to streams, and the breakdown of this material to fine particulate organic matter (FPOM) is a key ecosystem function. 2. We used mesocosms in a natural stream setting to quantify the effects of grazing tadpoles, shredding macroinvertebrates and a combination of the two on leaf decomposition and associated microbial activity. We measured respiration rates of decomposing leaves, particulate organic matter (POM) and leaf biofilm biomass and C : N : P ratios, and leaf area loss in 4 treatments: Control, tadpole only (TP), tadpole and shredding macroinvertebrates (TP + INV) and shredding macroinvertebrates only (INV). We hypothesised that tadpoles would enhance leaf decomposition by changing nutrient availability and stimulating microbial activity. 3. Respiration rates ranged from 3.1 to 6.0 mg O₂ dry mass^?1 h^?1 and were significantly higher in the TP and TP + INV treatments than in the control. The TP + INV treatment had significantly higher POM in chambers than the control and INV treatments. The TP treatment had significantly lower leaf biofilm biomass than the control and INV treatments. 4. Tadpoles influenced the elemental balance of C and N in POM and leaf biofilm. In contrast to our prediction, molar C : N ratios were higher in the TP + INV treatment than in the control. Mean molar N : P ratios in POM were higher in the TP + INV treatment than in any other treatment. Leaf biofilm followed a similar pattern, but both TP and TP + INV had significantly higher N : P ratios than the control and INV treatments. Leaf area loss was greatest when tadpoles and invertebrates were together (TP + INV = 0.6% leaf area loss per mg organism) than separate (TP = 0.1%, INV = 3%), indicating facilitation. 5. Tadpoles indirectly affected leaf decomposition by influencing microbial communities and macroinvertebrate feeding. As such, ongoing amphibian declines may adversely affect a critical ecosystem function in freshwater habitats.     

Decay of Branchiostoma: implications for soft-tissue preservation in conodonts and other primitive chordates

Decay experiments on the cephalochordate Branchiostoma lanceolatum ('amphioxus') demonstrate that the most decay resistant structures are the notochord sheath and the cartilaginous rods which support the gill bars. However, even more labile soft parts, such as the muscles and skin may survive for at least 124 days under totally anoxic conditions. As the chevron-shaped muscles of the myomeres shrink and collapse, those on opposite sides of the trunk maybe displaced, resulting in pronounced offsetting. Only 1.42% of the initial dry weight of Branchiostoma is resistant to alkali and acid hydrolysis, compared to 46% in the polychaete Nereis virens. Branchiostoma is only likely to be fossilized as a result of decay inhibition and replication by early diagenetic minerals. The results of these experiments cast light on the interpretation of a number of primitive fossil chordates. There is no reason to infer extracellular decay-resistant cuticle in the Burgess Shale Pikaia. The axial lies preserved in the conodont animal specimens from the Carboniferous of Edinburgh, Scotland, represent the notochord. The displacement of the elements to one side of the head reflects the true position of the apparatus - the surrounding tissue has been lost through decay. The chevron-shaped structures in the Carboniferous chordate Conopiscius are the muscles of the myomeres, not external scales. The lines delineating the segments in the Silurian Jamoytius most likely represent the myosepta. There is some doubt about the nature of the only specimen interpreted as a fossil cephalochordate, Palaeobranchiostoma hamatotergum from the Permian of South Africa. □ Taphonomy, decay, softparts, Cephalochordata , Branchiostoma, lancelet, Chordata , Pikaia, conodont , Conopiscius, Jamoytius, Palaeobranchiostoma.     

Susceptibility of different developmental stages of the root-knot nematode, Meloidogyne incognita, to the nematicide oxamyl

Oxamyl (6.25 μg ml^-1 soil water) was applied to cucumber roots containing Meloidogyne incognita at different stages of nematode development. Oxamyl was more effective in reducing the proportion of juveniles which developed into females when applied soon after infection to second stage juveniles than when applied later (to third and fourth stage juveniles). Early application of oxamyl also significantly reduced the proportion of females with egg masses, whereas late application had no such effect. However, the number of eggs per egg mass and the size of the young adult females was significantly reduced by all oxamyl treatments - the earlier the application the greater the effect. These results support the hypothesis that actively feeding second stage juveniles of Meloidogyne spp. are more susceptible to systemic nematicides than are the non-feeding third and fourth stage juveniles.     

The effect of Tropical Cyclone Larry on tooth‐billed bowerbird Scenopoeetes dentirostris court attendance and decoration

Abstract The effect of Severe Tropical Cyclone Larry on tooth‐billed bowerbird court attendance and decoration was assessed for 32 courts located on the southern Atherton Tablelands. Numbers of active courts and the number of leaves on courts were compared with the two previous court attendance seasons. Compared with the 2004/2005 and 2005/2006 seasons, when court attendance was well established by mid‐September, tooth‐billed bowerbirds commenced court attendance late in the 2006/2007 season that followed Cyclone Larry. There were no courts active in mid‐September, and few were active in the first week of October. Twenty‐five percent fewer courts were active over the course of the 2006/2007 season than in the 2005/2006 season. For most of the 2006/2007 season, the average number of leaves on courts was significantly lower than in the previous two seasons. The 2006/2007 tooth‐billed bowerbird court attendance season appears to have been affected by direct disturbance to court sites and by the fruit shortage that followed the cyclone.     

The impact of Tropical Cyclone Larry on bird communities in fragments of the endangered rainforest Type 5b

Abstract Bird surveys were conducted to assess the impact of a severe cyclone on bird communities in three fragments of the endangered rainforest Type 5b on the Atherton Tablelands of far north Queensland. Bird communities were surveyed using timed area searches in three sites in each of the three fragments and were undertaken prior to and following Tropical Cyclone Larry. Cyclone Larry caused short‐term changes in the abundance of some species of birds in Type 5b rainforest fragments. Two weeks after the storm, in two of three fragments surveyed, abundance of the frugivorous wompoo fruit‐dove (Ptilinopus magnificus) and figbird (Sphecotheres viridis) had decreased while the omnivorous Macleay's honeyeater (Xanthotis macleayana) and Lewin's honeyeater (Meliphaga lewinii) decreased in abundance in all three locations. Most insectivorous species increased in some sites and decreased in others following Cyclone Larry. Rapid recovery of bird communities to approximately their pre‐cyclone state after only 7 months appeared to reflect the capacity of species to either modify their foraging behaviour, switch foods, or to move within or between fragments or to other food sources in the landscape.