Somatic chromosome number doubling of selected potato genotypes using callus culture or the colchicine treatment of shoot nodes in vitro

Experiments were carried out to double the somatic cell chromosome numbers of a monoploid and dihaploid of Solanum tuberosum and a genotype of S. circaeifolium subsp. quimense. Colchicine was used in vitro on shoot nodes from which the axillary meristems had been removed. Plants with doubled chromosome numbers were obtained from shoots grown from the tertiary, sub-axillary meristems of all three genotypes. The callus culture of stem and leaf explants was found to produce more shoots with doubled chromosome numbers than the colchicine treatment in the case of the dihaploid and quimense genotypes but no shoots were obtained from callus culture of the monoploid. Fifty-two % of the shoots from the dihaploid and 63% from the quimense clone were ploidy doubled in the case of the best callus culture system. Using a sub-lethal dose of colchicine, the dihaploid yielded 37% ploidy-doubled shoots whereas all the shoots produced from the monoploid were doubled and the quimense clone produced 27% doubled plants. Callus culture was highly dependent upon the type of growth medium and other, unknown, factors. The colchicine treatment, although yielding fewer products, was more reliable for achieving ploidy doubling in selected clones if the number of plants produced is not important.     

The anatomy of a ‘suture zone’ in Amazonian butterflies: a coalescent‐based test for vicariant geographic divergence and speciation

Attempts by biogeographers to understand biotic diversification in the Amazon have often employed contemporary species distribution patterns to support particular theories, such as Pleistocene rainforest refugia, rather than to test among alternative hypotheses. Suture zones, narrow regions where multiple contact zones and hybrid zones between taxa cluster, have been seen as evidence for past expansion of whole biotas that have undergone allopatric divergence in vicariant refuges. We used coalescent analysis of mutilocus sequence data to examine population split times in 22 pairs of geminate taxa in ithomiine and heliconiine butterflies. We test a hypothesis of simultaneous divergence across a suture zone in NE Peru. Our results reveal a scattered time course of diversification in this suture zone, rather than a tight cluster of split times. Additionally, we find rapid diversification within some lineages such as Melinaea contrasting with older divergence within lineages such as the Oleriina (Hyposcada and Oleria). These results strongly reject simple vicariance as a cause of the suture zone. At the same time, observed lineage effects are incompatible with a series of geographically coincident vicariant events which should affect all lineages similarly. Our results suggest that Pleistocene climatic forcing cannot readily explain this Peruvian suture zone. Lineage‐specific biological traits, such as characteristic distances of gene flow or varying rates of parapatric divergence, may be of greater importance.     

Effect of Drought on Metabolism and Partitioning of Carbon in Two Wheat Varieties Differing in Drought-tolerance

A model was constructed to describe the partitioning of carbonon the third and seventh day from anthesis for well-wateredand droughted plants of two wheat varieties (Triticum aestivumL. cv. Warigal and Condor). The glasshouse-grown plants weredetillered so that a simplified model could be derived for themain stem. The 9-d drought treatment, imposed just after anthesisduring the period of cell division in the grains, reduced grainyield by 18 per cent in Warigal and 30 per cent in Condor. Netcarbon fixation was up to 60 per cent higher in Warigal thanCondor towards the end of the drought period and this correlatedwith better osmotic adjustment in the flag leaf. Carbon partitioningbetween plant organs responded to water deficit more rapidlythan net carbon fixation. On day 3, carbon allocation to theroots of droughted plants was maintained in Condor and increasedby 14 per cent in Warigal, whereas carbon allocation to theear decreased in both varieties. However the roots did not competewell with the ear when the water deficit became more severe.Warigal accumulated 3 times more stem reserves than Condor underdrought. In the roots, the pattern of carbon allocation betweenrespiration and carbon accumulation changed soon after impositionof drought. Although total root respiration decreased underdrought it became more energy efficient, particularly for Warigal,as less respiration took place via the alternative pathway.On day 3, the larger carbon allocation to the roots and thelower root respiration accounted for the 4-times larger sugaraccumulation in droughted roots of Warigal compared with thoseof Condor. Osmotic adjustment in mature leaves and roots maybe of importance for the maintenance of vital processes andfor recovery after drought. Triticum aestivum L., wheat, drought, carbon, partitioning     

New insights in Salicornia L. and allied genera (Chenopodiaceae) inferred from nrDNA sequence data

A phylogenetic analysis was performed based on ITS DNA sequences of fourteen samples from different sources of six species of Salicornia, the three allied genera Arthrocnemum, Sarcocornia and Halocnemum of the same tribe Salicornieae, and other genera of the subfamily Salicornioideae used in previous studies. Bassia hirsuta, Camphorosma monspeliaca (subfamily Chenopodioideae) and four species of Suaeda (subf. Suaedoideae) were chosen as outgroups. Results show that the annual genus Salicornia is a sister group to the perennial genera Sarcocornia, Arthrocnemum and Halocnemum. Moreover, the phylogenetic analysis based on ITS results distinguished two groups of Salicornia species which fitted with ploidy level: one group consisted of diploid species, and the second of tetraploid ones. Sarcocornia and Arthrocnemum are shown to be closely related, even though the species investigated here exhibited an evident distance between their ITS sequences. On the basis of our results, these two genera should be united. Bienertia (already separated as Bienertieae) was confirmed as probable outgroup to the subf. Salicornioideae, while Kalidium (subf. Salicornioideae, tribe Halopeplideae) was an outgroup to the rest of the Salicornioideae (tribe Salicornieae). The group Allenrolfea plus Halocnemum was the most basal of the tribe Salicornieae amongst those investigated in this study. The two samples of Halocnemum strobilaceum used in this work displayed numerous changes (transitions and transversions) in their respective sequences, probably related to their morphological and chorological differentiation. On the basis of our analysis, the most probable basal chromosome number for Salicornieae appears to be 2n = 18. The same number would also be the base number for the annual genus Salicornia and the perennial Arthrocnemum ( + Sarcocornia), with polyploidy arising independently in the two groups.     

Comparison of regeneration following burning,clearing or mineral sand mining at Tomago,NSW: I. Structure and growth of the vegetation

Abstract We have begun a long-term ecological research project to address questions about the impact of multiple disturbances on the species richness of communities and whether multiple disturbances are additive or interactive. A protected water catchment area was chosen, which is subjected to fires, sand mining and clearing, and for which detailed records are available. The study area, at Tomago (32°52′S, 151°45′E), has forest, woodland, shrubland and swamp on a sand substrate, with the vegetated dunes forming part of a coastal embayment. Forty-four sites were located in forested areas that had undergone disturbance by either fire, sand mining or clearing. Sites of each disturbance type were grouped into four age classes: less than 1 year since disturbance, nominally 1991; 5 years, nominally 1986; 11 years, nominally 1980; and 17 years, nominally 1974. A set of burned sites, with the time of the last fire matched to the times of the other disturbances, was used as the control response. In this paper we describe the study area and sites, then examine the effects of each single disturbance on vegetation structure. Canopy cover increased with time and type of disturbance, with 17 year old cleared or mined sites similar to the cover of 11 year old burned sites. In the first two years after disturbance, burned sites had significantly more understorey vegetation than cleared or mined sites, but by 5 years all three were similar. The data presented here show that regeneration of mined sites at Tomago is substantially slower than regeneration following disturbance by fire, with the regeneration of cleared sites intermediate but closer to mining than fire. After 17 years regeneration, cleared and sand mined sites had not returned to the vegetation structure of the pre-disturbance state. Understorey height and the amount of vegetation on cleared or mined sites have not achieved the levels in the original forest, although canopy cover did seem to have reached pre-disturbance levels. Current rehabilitation techniques are more sophisticated than those used 17 years ago and continued monitoring of sites currently being rehabilitated may show a faster return to pre-disturbance states. Having established the hierarchy and nature of the response to each single disturbance here, we are now in a position to investigate the impact of multiple disturbances.     

Statistical deconvolution of enthalpic energetic contributions to MHC-peptide binding affinity

Background  

MHC Class I molecules present antigenic peptides to cytotoxic T cells, which forms an integral part of the adaptive immune response. Peptides are bound within a groove formed by the MHC heavy chain. Previous approaches to MHC Class I-peptide binding prediction have largely concentrated on the peptide anchor residues located at the P2 and C-terminus positions.     

Effectiveness of short‐tongued bees as pollinators of apparently ornithophilous New Zealand mistletoes

Abstract The flowers of two species of threatened New Zealand mistletoes (Peraxilla tetrapetala and Peraxilla colensoi, Loranthaceae) have explosive buds that do not open unless force is applied by birds or two species of native short‐tongued bees. Opened flowers are visited by a variety of birds and insects. Although both species of Peraxilla conform to a pollination syndrome of ornithophily, bees may be effective alternative pollinators. We investigated the effectiveness of bees and birds as pollinators of P. colensoi at one site and P. tetrapetala at two sites in the South Island. Bees and other insects outnumbered birds as flower visitors at all three sites. By excluding birds with wire cages, we showed that two bee species regularly open flowers of P. tetrapetala, but only rarely open flowers of P. colensoi. Few pollen grains were deposited when either birds or bees opened buds, so opening buds was not by itself sufficient for adequate pollination. Instead, pollen continued to accumulate over the next 6 or 7 days, even inside cages that excluded birds. Both populations of P. tetrapetala were regularly pollen‐limited, but in different ways. At Ohau, opened flowers gained enough pollen to produce seeds, but many buds were not opened and hence failed to set seed. In contrast, at Craigieburn, nearly all buds were opened, but many of these did not receive enough pollen. These results demonstrate that native bees can partially replace birds as pollinators of mistletoes, despite their apparent ornithophilous syndrome. Ongoing reductions in New Zealand forest bird numbers means that the service bees provide may be important for the long‐term future of these plants.