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81.
Ian R. Davison 《Journal of phycology》1987,23(Z2):273-283
The effect of growth temperature on photosynthetic metabolism was studied in the kelp Laminaria saccharina (L.) Lamour. Photosynthesis was subject to phenotypic adaptation, with almost constant photosynthetic rates being achieved at growth temperatures between 0 and 20° C. This response involved: (1) an inverse relationship between growth temperature and photosynthetic capacity, (2) a reduction in the Q10 value for photosynthesis of L. saccharina grown at 0 and 5° C compared with 10, 15 and 20° C grown sporophytes, and (3) an acquired tolerance of photosynthesis to temperatures between 15–25° C (which inhibited photosynthesis in 0 and 5° C grown L. saccharina) in sporophytes grown at 10, 15 and 20° C. The physiological basis of these adaptations is discussed in terms of observed changes in activities and kinetics of the Calvin cycle enzyme ribulose-1, 5-bisphosphate carboxylase (oxygenase) and efficiency of light harvesting-electron transport systems. 相似文献
82.
Xiaoyu Qu Jerry Davison Liping Du Barry Storer Derek L Stirewalt Shelly Heimfeld Elihu Estey Frederick R Appelbaum Min Fang 《Epigenetics》2015,10(6):526-535
Aberrant DNA methylation is known to occur in cancer, including hematological malignancies such as acute myeloid leukemia (AML). However, less is known about whether specific methylation profiles characterize specific subcategories of AML. We examined this issue by using comprehensive high-throughput array-based relative methylation analysis (CHARM) to compare methylation profiles among patients in different AML cytogenetic risk groups. We found distinct profiles in each group, with the high-risk group showing overall increased methylation compared with low- and mid-risk groups. The differentially methylated regions (DMRs) distinguishing cytogenetic risk groups of AML were enriched in the CpG island shores. Specific risk-group associated DMRs were located near genes previously known to play a role in AML or other malignancies, such as MN1, UHRF1, HOXB3, and HOXB4, as well as TRIM71, the function of which in cancer is not well characterized. These findings were verified by quantitative bisulfite pyrosequencing and by comparison with results available at the TCGA cancer genome browser. To explore the potential biological significance of the observed methylation changes, we correlated our findings with gene expression data available through the TCGA database. The results showed that decreased methylation at HOXB3 and HOXB4 was associated with increased gene expression of both HOXB genes specific to the mid-risk AML, while increased DNA methylation at DCC distinctive to the high-risk AML was associated with increased gene expression. Our results suggest that the differential impact of cytogenetic changes on AML prognosis may, in part, be mediated by changes in methylation. 相似文献
83.
A C Frantz A D McDevitt L C Pope J Kochan J Davison C F Clements M Elmeros G Molina-Vacas A Ruiz-Gonzalez A Balestrieri K Van Den Berge P Breyne E Do Linh San E O ?gren F Suchentrunk L Schley R Kowalczyk B I Kostka D ?irovi? N ?prem M Colyn M Ghirardi V Racheva C Braun R Oliveira J Lanszki A Stubbe M Stubbe N Stier T Burke 《Heredity》2014,113(5):443-453
Although the phylogeography of European mammals has been extensively investigated
since the 1990s, many studies were limited in terms of sampling distribution, the
number of molecular markers used and the analytical techniques employed, frequently
leading to incomplete postglacial recolonisation scenarios. The broad-scale genetic
structure of the European badger (Meles meles) is of interest as it may
result from historic restriction to glacial refugia and/or recent anthropogenic
impact. However, previous studies were based mostly on samples from western Europe,
making it difficult to draw robust conclusions about the location of refugia,
patterns of postglacial expansion and recent demography. In the present study,
continent-wide sampling and analyses with multiple markers provided evidence for two
glacial refugia (Iberia and southeast Europe) that contributed to the genetic
variation observed in badgers in Europe today. Approximate Bayesian computation
provided support for a colonisation of Scandinavia from both Iberian and southeastern
refugia. In the whole of Europe, we observed a decline in genetic diversity with
increasing latitude, suggesting that the reduced diversity in the peripheral
populations resulted from a postglacial expansion processes. Although MSVAR v.1.3
also provided evidence for recent genetic bottlenecks in some of these peripheral
populations, the simulations performed to estimate the method''s power to
correctly infer the past demography of our empirical populations suggested that the
timing and severity of bottlenecks could not be established with certainty. We urge
caution against trying to relate demographic declines inferred using MSVAR with
particular historic or climatological events. 相似文献
84.
Translocations can take a variety of forms, and there is considerable debate as to what defines an acceptable translocation. This is particularly so if a proposal suggests moving a species beyond its natural range, which might be necessary for conservation purposes if habitat within the natural range is extensively modified. An extension of this approach is to use closely related ecological analogs to replace extinct species. This approach is controversial, and opportunities to do so will be rare, particularly for vertebrate species, but the use of ecological analogs is not without precedent, and ultimately will provide for more complete ecological restoration. We discuss the current use of ecological analogs to replace extinct species and conclude with a rare opportunity to replace the extinct New Zealand quail Coturnix novaezelandiae with the extant Australian brown quail Coturnix ypsilophora. 相似文献
85.
Arnaud Costa Ingrid Ricard Anthony C. Davison Ted C. J. Turlings 《Journal of Insect Behavior》2010,23(4):303-318
Associative learning is known to modify foraging behavior in numerous parasitic wasps. This is in agreement with optimal foraging
theory, which predicts that the wasps will adapt their responses to specific cues in accordance with the rewards they receive
while perceiving these cues. Indeed, the generalist parasitoid Cotesia marginiventris shows increased attraction to a specific plant odor after perceiving this odor during contact with hosts. This positive associative
learning is common among many parasitoids, but little is known about the effects of unrewarding host searching events on the
attractiveness of odors. To study this, preferences of female C. marginiventris for herbivore-induced odors of three plant species were tested in a six-arm olfactometer after the wasps perceived one of
these odors either i) without contacting any caterpillars, ii) while contacting the host caterpillar Spodoptera littoralis, or iii) while contacting the non-host caterpillar Pieris rapae. The results confirm the effects of positive associative learning, but showed no changes in innate responses to the host-induced
odors after “negative” experiences. Hence, a positive association is made during an encounter with hosts, but unsuccessful
host-foraging experiences do not necessarily lead to avoidance learning in this generalist parasitoid. 相似文献
86.
Cecilia Ferndahl Nicklas Bonander Christel Logez Renaud Wagner Lena Gustafsson Christer Larsson Kristina Hedfalk Richard AJ Darby Roslyn M Bill 《Microbial cell factories》2010,9(1):47
Background
Recombinant protein production is universally employed as a solution to obtain the milligram to gram quantities of a given protein required for applications as diverse as structural genomics and biopharmaceutical manufacture. Yeast is a well-established recombinant host cell for these purposes. In this study we wanted to investigate whether our respiratory Saccharomyces cerevisiae strain, TM6*, could be used to enhance the productivity of recombinant proteins over that obtained from corresponding wild type, respiro-fermentative strains when cultured under the same laboratory conditions. 相似文献87.
88.
Fabbro T Davison AC Steinger T 《TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik》2007,115(7):933-944
Many quantitative genetic statistics are functions of variance components, for which a large number of replicates is needed
for precise estimates and reliable measures of uncertainty, on which sound interpretation depends. Moreover, in large experiments
the deaths of some individuals can occur, so methods for analysing such data need to be robust to missing values. We show
how confidence intervals for narrow-sense heritability can be calculated in a nested full-sib/half-sib breeding design (males
crossed with several females) in the presence of missing values. Simulations indicate that the method provides accurate results,
and that estimator uncertainty is lowest for sampling designs with many males relative to the number of females per male,
and with more females per male than progenies per female. Missing data generally had little influence on estimator accuracy,
thus suggesting that the overall number of observations should be increased even if this results in unbalanced data. We also
suggest the use of parametrically simulated data for prior investigation of the accuracy of planned experiments. Together
with the proposed confidence intervals an informed decision on the optimal sampling design is possible, which allows efficient
allocation of resources. 相似文献
89.
Kovacheva VP Mellott TJ Davison JM Wagner N Lopez-Coviella I Schnitzler AC Blusztajn JK 《The Journal of biological chemistry》2007,282(43):31777-31788
During gestation there is a high demand for the essential nutrient choline. Adult rats supplemented with choline during embryonic days (E) 11-17 have improved memory performance and do not exhibit age-related memory decline, whereas prenatally choline-deficient animals have memory deficits. Choline, via betaine, provides methyl groups for the production of S-adenosylmethionine, a substrate of DNA methyltransferases (DNMTs). We describe an apparently adaptive epigenomic response to varied gestational choline supply in rat fetal liver and brain. S-Adenosylmethionine levels increased in both organs of E17 fetuses whose mothers consumed a choline-supplemented diet. Surprisingly, global DNA methylation increased in choline-deficient animals, and this was accompanied by overexpression of Dnmt1 mRNA. Previous studies showed that the prenatal choline supply affects the expression of multiple genes, including insulin-like growth factor 2 (Igf2), whose expression is regulated in a DNA methylation-dependent manner. The differentially methylated region 2 of Igf2 was hypermethylated in the liver of E17 choline-deficient fetuses, and this as well as Igf2 mRNA levels correlated with the expression of Dnmt1 and with hypomethylation of a regulatory CpG within the Dnmt1 locus. Moreover, mRNA expression of brain and liver Dnmt3a and methyl CpG-binding domain 2 (Mbd2) protein as well as cerebral Dnmt3l was inversely correlated to the intake of choline. Thus, choline deficiency modulates fetal DNA methylation machinery in a complex fashion that includes hypomethylation of the regulatory CpGs within the Dnmt1 gene, leading to its overexpression and the resultant increased global and gene-specific (e.g. Igf2) DNA methylation. These epigenomic responses to gestational choline supply may initiate the long term developmental changes observed in rats exposed to varied choline intake in utero. 相似文献
90.