Formation of a Secretion-Competent Protein Complex by a Dynamic Wrap-around Binding Mechanism

Bacterial virulence is typically initiated by translocation of effector or toxic proteins across host cell membranes. A class of gram-negative pathogenic bacteria including Yersinia pseudotuberculosis and Yersinia pestis accomplishes this objective with a protein assembly called the type III secretion system. Yersinia effector proteins (Yop) are presented to the translocation apparatus through formation of specific complexes with their cognate chaperones (Syc). In the complexes where the structure is available, the Yops are extended and wrap around their cognate chaperone. This structural architecture enables secretion of the Yop from the bacterium in early stages of translocation. It has been shown previously that the chaperone-binding domain of YopE is disordered in its isolation but becomes substantially more ordered in its wrap-around complex with its chaperone SycE. Here, by means of NMR spectroscopy, small-angle X-ray scattering and molecular modeling, we demonstrate that while the free chaperone-binding domain of YopH (YopH^CBD) adopts a fully ordered and globular fold, it populates an elongated, wrap-around conformation when it engages in a specific complex with its chaperone SycH₂. Hence, in contrast to YopE that is unstructured in its free state, YopH transits from a globular free state to an elongated chaperone-bound state. We demonstrate that a sparsely populated YopH^CBD state has an elevated affinity for SycH₂ and represents an intermediate in the formation of the protein complex. Our results suggest that Yersinia has evolved a binding mechanism where SycH₂ passively stimulates an elongated YopH conformation that is presented to the type III secretion system in a secretion-competent conformation.     

High-resolution mapping of 33 years of material stock and population growth in Germany using Earth Observation data

Global societal material stock in buildings and infrastructure have accumulated rapidly within the last decades, along with population growth. Recently, an approach for nation-wide mapping of material stock at 10 m spatial resolution, using freely available and globally consistent Earth Observation (EO) imagery, has been introduced as an alternative to cost-intensive cadastral data or broad-scale but thematically limited nighttime light-based mapping. This study assessed the potential of EO data archives to create spatially explicit time series data of material stock dynamics and their relation to population in Germany, at a spatial resolution of 30 m. We used Landsat imagery with a change-aftereffect-trend analysis to derive yearly masks of land surface change from 1985 onward. Those served as an input to an annual reverse calculation of six material stock types and building volume-based annual gridded population, based on maps for 2018. Material stocks and population in Germany grew by 13% and 4%, respectively, showing highly variable spatial patterns. We found a minimum building stock of ca. 180 t/cap across all municipalities and growth processes characterized by sprawl. A rapid growth of stocks per capita occurred in East Germany after the reunification in 1990, with increased building activity but population decline. Possible over- or underestimations of stock growth cannot be ruled out due to methodological assumptions, requiring further research.     

Survey of large branchiopods on Aruba and observations on taxonomic characters in Leptestheria (Spinicaudata)

A survey of more than 60 ephemeral pools during March 1989 resulted in finding three large branchiopods not previously known to occur on the Caribbean Island of Aruba. These were two Anostraca, Dendrocephalus spartaenovae Margalef, 1967 and Thamnocephalus venezuelensis Belk & Pereira, 1982, and one Spinicaudata, Leptestheria venezuelica Daday, 1923. The notostracan previously reported from Aruba, Triops longicaudatus (LeConte, 1846), was also collected from several pools. All of these species occur also in Venezuela, which is separated from Aruba by an ocean gap of about 25 km. Comparison of Leptestheria venezuelica with Leptestheria compleximanus (Packard, 1877) demonstrated that cephalic morphology provides useful taxonomic features including length of rostrum, depth of occipital notch, shape of the occipital region, and protrusion of the eye capsule. These features may prove useful in studying other species of Leptestheria.     

Regionalization of sorption capacities for arsenic and cadmium

To fulfill the purpose as a sink for trace elements, soils must not be overloaded with As and Cd. Therefore, it is necessary to get knowledge of the sorption capacities of soils on a regional scale. The determination of these sorption capacities for large areas is, however, impeded by the great expenditure of laboratory work involved. With data presented here retention capacities for cadmium and arsenic from routinely determined soil parameters are estimated. In batch experiments the sorption behaviour of 40 soils from the area of Freiberg/Saxony in Germany was examined. The obtained sorption isotherms from the laboratory were fitted to the Freundlich equation (S = k^*C^m). The two constants (k, m) of this equation were used for multiple linear regression to correlate the sorption capacity and the soil parameters, namely clay content, pH value, total organic carbon, and dithionite extractable Fe contents. Due to long lasting ore mining of Freiberg there exist high background levels in that area for the two surveyed elements As and Cd. Therefore, this study offers two different mathematical procedures to take these contaminations into account. Thus the experimental data were corrected before they were fitted to Freundlich and pedotransfer equations were determined. Using the transfer equation, parameter k and m for cadmium sorption could be estimated with statistical certainties of 91% and 61% (adjusted R²), respectively, whereas the predictability for the arsenic sorption is not practicable because achieved R₂ values are very low (17% and 7%). This revised version was published online in June 2006 with corrections to the Cover Date. This revised version was published online in June 2006 with corrections to the Cover Date. This revised version was published online in June 2006 with corrections to the Cover Date.     

Equine dinucleotide repeat loci COR081–COR100

The nucleotide sequences data reported in this paper were submitted to the EMBL library at the European Bioinformatics Institute (EBI).