Genome of Herbaspirillum seropedicae strain SmR1, a specialized diazotrophic endophyte of tropical grasses

The molecular mechanisms of plant recognition, colonization, and nutrient exchange between diazotrophic endophytes and plants are scarcely known. Herbaspirillum seropedicae is an endophytic bacterium capable of colonizing intercellular spaces of grasses such as rice and sugar cane. The genome of H. seropedicae strain SmR1 was sequenced and annotated by The Paraná State Genome Programme--GENOPAR. The genome is composed of a circular chromosome of 5,513,887 bp and contains a total of 4,804 genes. The genome sequence revealed that H. seropedicae is a highly versatile microorganism with capacity to metabolize a wide range of carbon and nitrogen sources and with possession of four distinct terminal oxidases. The genome contains a multitude of protein secretion systems, including type I, type II, type III, type V, and type VI secretion systems, and type IV pili, suggesting a high potential to interact with host plants. H. seropedicae is able to synthesize indole acetic acid as reflected by the four IAA biosynthetic pathways present. A gene coding for ACC deaminase, which may be involved in modulating the associated plant ethylene-signaling pathway, is also present. Genes for hemagglutinins/hemolysins/adhesins were found and may play a role in plant cell surface adhesion. These features may endow H. seropedicae with the ability to establish an endophytic life-style in a large number of plant species.     

连锁与交换理论问题的研究

在Perkins方程的基础上导出了交换率、交叉数和符合系数之间在正负干涉作用下的函数关系式;给出了正干涉及交叉发生的概率;此外,还导出了负干涉作用下的符合系数计算公式和正负干涉系数的统一性质及其定义域;引入Kosambi方程,建立了用于计算两点测交或三点测交中单交换的符合系数的联立方程。通过上述公式的数学推论,获得了两点重要结论:(1)具有互斥性的正负干涉作用都强烈地发生在短距离的两基因之间; (2)在全负干涉时,有双交换的极大值并等于两个单交换值。后一结论与Patric ia St.Lawrence所观察的试验结果完全一致。     

Efficient Gene Transfer Mediated by HIV-1-based Defective Lentivector and Inhibition of HIV-1 Replication

Lentiviral vectors have drawn considerable attention recently and show great promise to become important delivery vehicles for future gene transfer manipulation. In the present study we have optimized a protocol for preparation of human immunodeficiency virus type-1 (HIV-1)-based defective lentiviral vectors (DLV) and characterized these vectors in terms of their transduction of different cells. Transient co-transfection of 293T packaging cells with DNA plasmids encoding lentiviral vector constituents resulted in production of high-titer DLV (0.5-1.2 × 107IU/mL), which can be further concentrated over 100-fold through a single step ultracentrifugation. These vectors were capable of transducing a variety of cells from both primate and non-primate sources and high transduction efficiency was achieved using concentrated vectors. Assessment of potential generation of RCV revealed no detection of infection by infectious particles in DLV-transduced CEM, SupT-1 and MT-2 cells. Long-term culture of transduced cells showed a stable expression of transgenes without apparent alteration in cellular morphology and growth kinetics. Vector mobilization to untransduced cells mediated by wild-type HIV-1 infection was confirmed in this test. Challenge of transduced human T-lymphocytes with wild-type HIV-1 showed these cells are totally resistant to the viral infection. Considering the effective gene transfer and stable gene expression, safety and anti-HIV activity, these DLV vectors warrant further exploration for their potential use as a gene transfer vehicle in the development of gene therapy protocols.     

Size control of silica nanoparticles and their surface treatment for fabrication of dental nanocomposites

Nearly monodispersed silica nanoparticles having a controlled size from 5 to 450 nm were synthesized via a sol-gel process, and then the optimum conditions for the surface treatment of the synthesized silica nanoparticles with a silane coupling agent (i.e., 3-methacryloxypropyltrimethoxysilane (gamma-MPS)) were explored to produce dental composites exhibiting enhanced adhesion and dispersion of silica nanoparticles in the resin matrix. The particle size was increased by increasing amounts of the catalyst (NH4OH) and silica precursor (tetraethylorthosilicate, TEOS) and by decreasing the amount of water in the reaction mixtures regardless of solvents used for the synthesis. The particle size prepared by using ethanol as a solvent was significantly larger than that prepared by using methanol as a solvent when the composition of the reaction mixture was fixed. The nanosized particles in the 5-25 nm range were aggregated. The amount of grafted gamma-MPS on the surface of the synthesized silica nanoparticles was dependent on the composition of the reaction mixture when an excess amount of gamma-MPS was used. When surface treatment was performed at optimum conditions found here, the amount of the grafted gamma-MPS per unit surface area of the silica nanoparticles was nearly the same regardless of the particle size. Dispersion of the silica particles in the resin matrix and interfacial adhesion between silica particles and resin matrix were enhanced when surface treated silica nanoparticles were used for preparing dental nanocomposites.     

Role of venom and ovarian proteins in immune suppression of Ostrinia furnacalis （Lepidoptera： Pyralidae） larvae parasitized by Macrocentrus cingulum （Hymenoptera： Braconidae）, a polyembryonic parasitoid

Venom and ovarian proteins in braconid and ichneumonid wasps play an important role in the successful parasitism of their host, especially for immune suppression immediately after oviposition. In this study, we compared the effect of venom and ovarian proteins collected from the female wasps of Macrocentrus cingulum, a polyembryonic parasitoid of the larvae of Ostriniafunacalis, on the encapsulation capacity of Sephadex A- 25 beads at 4 h and 24 h post-injection both in vivo and in vitro. The results showed that the ovarian proteins significantly interfered with the encapsulation capacity of hemocytes in a dose-dependent manner. Spreading and viability of hemocytes in O. furnacalis was not disrupted by venom and ovarian proteins at various concentrations injected. It seems likely that the ovarian proteins from M. cingulum play a role in suppressing the encapsulation capacity of host hemocytes.     

Solution structure of Escherichia coli PapI, a key regulator of the pap pili phase variation

Pyelonephritis-associated pili (pap) allow uropathogenic Escherichia coli to bind to epithelial cells and play an important role in urinary tract infection. Expression of pap is controlled by a phase-variation mechanism, based on the two distinct heritable states that are the result of adenine N6-methylation in either of the two GATC sequences in its regulatory region. The methylation status of these two sequences is sensed by the action of two proteins, Lrp and PapI, and they play a central role in determining pap gene expression in both phase-ON and phase-OFF cells. We used modern NMR techniques to determine the solution structure and backbone dynamics of PapI. We found its overall fold resembles closely that of the winged helix-turn-helix family of DNA-binding proteins. We determined that PapI possesses its own DNA-binding activity, albeit non-sequence-specific, independent of Lrp. PapI appears to bind to DNA with a K(d) in the 10 microM range. Possible mechanisms by which PapI might participate in the regulation of the pap operon are discussed in light of these new findings.     

Leber氏病的mtDNA突变

Leber氏病是一种典型的母系遗传病,表现为急性、亚急性视神经萎缩,Wallace于1988年首次证实了此病患者中存在mtDNA的特异性改变—Wallace突变。我们研究了8个独立来源的中国汉族人Leber氏病患者,其中在4个患者中找到了mtDNA的Wallace突变,支持了Wallac。关于Leber氏病发病机理的假说。     

体外永久培养的人鼠杂交瘤

小鼠骨髓瘤细胞SP2/0(HGPRT~-)与人体外周血淋巴细胞经PEG介导融合、HAT培养基选择,获得了体外永久培养的人鼠杂交瘤。细胞遗传学分析证实杂种群体中尚保留着5—12条人染色体,未查见种间染色体易位。A_4单克隆中保留了人9、11、X、11、18、19、22号染色体。杂种细胞G6PD同工酶电泳出现三带型酶谱,表明人和鼠的G6PD在杂种细胞中均有表达。对杂种细胞及其亲本的自发多核化现象和细胞松弛素B的多核效应进行了观察比较。这种人鼠杂交细胞可望用于制备人类免疫球蛋白链基因克隆和人类单克隆抗体,也可用于人类基因定位及恶性表达分析等方面的研究。     

Molecular characterization and functional expression of opioid receptor-libe_1 receptor

INTRODUCTIONOpioidactsinthecentralandperipheralnervoussystem(CNSandPNS)to'producenumerouspharmacologicaleffects.Repetitiveorcontinuoususeofopioids,however,causesdrugtoleranceanddependence.Threesubtypesofopioidreceptors,termedp)6,andK,havebeencloned.TheyarecoupledtotheinhibitoryGproteinandnegativelyregulateadenylylcyclasell].RecentlyanewG-proteincoupledreceptortermedopioidreceptor-likereceptor(ORLI)whichbelongstothenewlycharacterizedopioidreceptorsubfamilyhadbeenclonedfromhumanbrainst…