Species diversity of Plagiorchis Lühe, 1899 (Digenea: Plagiorchiidae) in lymnaeid snails from freshwater ecosystems in central Europe revealed by molecules and morphology

Larval stages of Plagiorchis spp. are both ubiquitous and ecologically important parasites in snail populations of freshwater ecosystems in Europe. However, difficulties in distinguishing the morphologically similar cercariae used for species identification, may lead to underestimation of species diversity. In this study, 38 isolates of Plagiorchis spp. infecting two lymnaeid snails, Lymnaea stagnalis (L.) and Radix auricularia (L.), in five central European freshwater ecosystems were subjected to morphological and molecular assessment. Five morphologically homogeneous and genetically distinct lineages of Plagiorchis spp. were identified via matching molecular data for the mitochondrial cytochrome c oxidase subunit I (cox1) gene with detailed morphological and morphometric data of the cercariae. Comparative sequence analysis using partial 28S rDNA and ITS1-5.8S-ITS2 sequences revealed that three distinct cox1 lineages are conspecific with Plagiorchis elegans (Rudolphi, 1802), P. maculosus (Rudolphi, 1802) and P. koreanus Ogata, 1938, respectively, whereas the lineage identified based on cercarial morphology as P. neomidis Brendow, 1970 plus a single isolate that could not be assigned to a described species, did not match any of the available sequences for Plagiorchis spp. A key to the cercariae of Plagiorchis spp. parasitising lymnaeid populations in central Europe is provided to facilitate identification.     

Soil microarthropods in non-intervention montane spruce forest regenerating after bark-beetle outbreak

We studied Oribatida and Collembola in an old-growth Norway spruce (Picea abies) forest that suffered a massive bark beetle (Ips typographus) outbreak in the 1990s and gradually decayed. It was left to regenerate naturally without human intervention. There was a high abundance of a few tolerant species and lower numbers of sensitive silvicolous ones. The most dominant species were Tectocepheus velatus, Platynothrus peltifer and Isotomiella minor. Although the details, which determine the identity of successful species, remain unknown, parthenogenesis, high reproduction rate and detrito- or detritofungivorous feeding were the common features of the most dominant species in our study. Trait assessment showed an overall predominance of parthenogenesis and high abundance of detritivorous oribatids. The soil functions connected with Oribatida and Collembola seem to be still affected by the bark-beetle outbreak and our results indicate that the disturbance caused important changes in the functioning of the whole soil ecosystem.     

Late-Glacial and Holocene Environmental History of an Oxbow Wetland in the Polabí Lowland (River Elbe,Czech Republic); a Context-Dependent Interpretation of a Multi-Proxy Analysis

This study presents a palaeoenvironmental reconstruction of an oxbow wetland covering the past 11,500 years. The origin of the oxbow lake and development of the floodplain wetland and changes of the surrounding vegetation are reconstructed using palaeobotanical analyses, radiocarbon dating, detailed sediment stratigraphy and micromorphology of samples taken from a former palaeomeander of the river Elbe in the Czech Republic. The sedimentary record of the section Chrast was chosen due to its exceptional position within the area of former oxbow lakes. Using a multi-proxy approach, we investigated how this environment reflected climatic changes during the Holocene. Our results show that the Chrast section covers the Late-Glacial to the Middle Holocene period, which is climatically very unstable and characterized by extensive vegetation and sedimentological changes. The macrofossil record provides detailed evidence of Allerød vegetation. The sedimentological record reflects changes in fluvial activity (meandering-braided transition in the channel pattern) during Late-Glacial/Holocene and postsedimentological changes (occurrence of a doplerite layer) in the middle Holocene. We follow three independent lines of interpretation: (a) a local autogenic environmental-succession process, (b) a regional process driven by climate change, and (c) the role of stochastic and indeterministic processes.     

Morphological and molecular characterization within 26 strains of the genus Cylindrospermum (Nostocaceae,Cyanobacteria), with descriptions of three new species

Twenty‐six strains morphologically identified as Cylindrospermum as well as the closely related taxon Cronbergia siamensis were examined microscopically as well as phylogenetically using sequence data for the 16S rRNA gene and the 16S‐23S internal transcribed spacer (ITS) region. Phylogenetic analysis of the 16S rRNA revealed three distinct clades. The clade we designate as Cylindrospermum sensu stricto contained all five of the foundational species, C. maius, C. stagnale, C. licheniforme, C. muscicola, and C. catenatum. In addition to these taxa, three species new to science in this clade were described: C. badium, C. moravicum, and C. pellucidum. Our evidence indicated that Cronbergia is a later synonym of Cylindrospermum. The phylogenetic position of Cylindrospermum within the Nostocaceae was not clearly resolved in our analyses. Cylindrospermum is unusual among cyanobacterial genera in that the morphological diversity appears to be more evident than sequence divergence. Taxa were clearly separable using morphology, but had very high percent similarity among ribosomal sequences. Given the high diversity we noted in this study, we conclude that there is likely much more diversity remaining to be described in this genus.     

Risk assessment of the crayfish pet trade based on data from the Czech Republic

The pet trade in freshwater crustaceans, including crayfish, has grown rapidly in recent decades and become an important pathway for introducing new non-indigenous species into Europe. This paper provides the first overview of non-indigenous crayfish species (NICS) traded as ornamental and their potential impact in the Czech Republic, which is the second leading importer into Europe. The paper presents a full list of traded crayfish species, their market availability, and trade names or misnomers used in the country. In total, 27 crayfish species from all three families are advertised and marketed, of which Astacus astacus is the only indigenous species. Only three NICS were recognized as very common on the market. The invasiveness and risk associated with ornamental crayfish trade were assessed using the Freshwater Invertebrate Invasiveness Scoring Kit. Five NICS were classified into the high-risk category, the highest score being for Procambarus fallax f. virginalis. The invasiveness of crayfish indigenous to North America is significantly greater than that of crayfish from the rest of the world, and therefore regulation in this regard is recommended.     

Diffusion of sphingomyelin and myelin oligodendrocyte glycoprotein in the membrane of OLN-93 oligodendroglial cells studied by fluorescence correlation spectroscopy

Evidence has been accumulated that the plasma membrane of various mammalian cell types is heterogeneous in structure and may contain lipid microdomains (lipid rafts). This study focuses on the membrane organization of living oligodendrocytes, which are the myelin-producing cells of the central nervous system. Fluorescence correlation spectroscopy (FCS) was used to monitor the lateral diffusion of a lipid and of a protein in the oligodendroglial cell line OLN-93. The lipid was fluorescently labelled sphingomyelin (Bodipy FL-C5 SM). The protein was the myelin oligodendrocyte glycoprotein (MOG). In order to monitor the lateral diffusion of MOG, OLN-93 cells were transfected with a MOG-EGFP (enhanced green fluorescent protein) fusion plasmid. The measurements were performed at room temperature. FCS data were analyzed for two-dimensional (2D) diffusion according to three models which all included a triplet fraction: (a) 2D 1 component (2D1C), (b) 2D anomalous diffusion (2D1Calpha), and (c) 2D 2 components (2D2C). Preliminary results indicate that for the lipid case, the best fits are obtained with 2D2C. In the case of MOG-EGFP, 2D2C and 2D1Calpha give fits of similar quality. The parameter estimates obtained with 2D1Calpha, however, have a lower standard deviation. The anomaly parameter for MOG-EGFP is 0.59+/-0.01.     

Intramolecular stacking interactions in ternary copper(II) complexes formed by a heteroaromatic amine and 9-[2-(2-phosphonoethoxy)ethyl]adenine, a relative of the antiviral nucleotide analogue 9-[2-(phosphonomethoxy)ethyl]adenine

The stability constants of the mixed-ligand complexes formed between Cu(Arm)2+, where Arm=2,2'-bipyridine (Bpy) or 1,10-phenanthroline (Phen), and the dianions of 9-[2-(2-phosphonoethoxy)ethyl]adenine (PEEA2-) and (2-phosphonoethoxy)ethane (PEE2-), also known as [2-(2-ethoxy)ethyl]phosphonate, were determined by potentiometric pH titrations in aqueous solution (25 degrees C; I=0.1 M, NaNO3). The ternary Cu(Arm)(PEEA) complexes are considerably more stable than the corresponding Cu(Arm)(R-PO3) species, where R-PO3(2-) represents a phosph(on)ate ligand with a group R that is unable to participate in any kind of interaction within the complexes. The increased stability is attributed to intramolecular stack formation in the Cu(Arm)(PEEA) complexes and also, to a smaller extent, to the formation of 6-membered chelates involving the ether oxygen atom present in the -CH2-O-CH2-CH2-PO3(2-) residue of PEEA2-. This latter interaction is separately quantified by studying the ternary Cu(Arm)(PEE) complexes which can form the 6-membered chelates but where no intramolecular ligand-ligand stacking is possible. Application of these results allows a quantitative analysis of the intramolecular equilibria involving three structurally different Cu(Arm)(PEEA) species; e.g., of the Cu(Bpy)(PEEA) system about 11% exist with the metal ion solely coordinated to the phosphonate group, 4% as a 6-membered chelate involving the ether oxygen atom of the -CH2-O-CH2CH2-PO3(2-) residue, and 85% with an intramolecular stack between the adenine moiety of PEEA2- and the aromatic rings of Bpy. In addition, the Cu(Arm)(PEEA) complexes may be protonated, leading to Cu(Arm)(H;PEEA)+ species for which it is concluded that the proton is located at the phosphonate group and that the complexes are mainly formed (50 and 70%) by a stacking adduct between Cu(Arm)2+ and the adenine residue of H(PEEA)-. Finally, the stacking properties of adenosine 5'-monophosphate (AMP2-), of the dianion of 9-[2-(phophonomethoxy)ethyl]adenine (PMEA2-) and of several of its analogues (=PA2-) are compared in their ternary Cu(Arm)(AMP) and Cu(Arm)(PA) systems. Conclusions regarding the antiviral properties of several acyclic nucleoside phosphonates are shortly discussed.     

Near Eastern Neolithic genetic input in a small oasis of the Egyptian Western Desert

The Egyptian Western Desert lies on an important geographic intersection between Africa and Asia. Genetic diversity of this region has been shaped, in part, by climatic changes in the Late Pleistocene and Holocene epochs marked by oscillating humid and arid periods. We present here a whole genome analysis of mitochondrial DNA (mtDNA) and high‐resolution molecular analysis of nonrecombining Y‐chromosomal (NRY) gene pools of a demographically small but autochthonous population from the Egyptian Western Desert oasis el‐Hayez. Notwithstanding signs of expected genetic drift, we still found clear genetic evidence of a strong Near Eastern input that can be dated into the Neolithic. This is revealed by high frequencies and high internal variability of several mtDNA lineages from haplogroup T. The whole genome sequencing strategy and molecular dating allowed us to detect the accumulation of local mtDNA diversity to 5,138 ± 3,633 YBP. Similarly, theY‐chromosome gene pool reveals high frequencies of the Near Eastern J1 and the North African E1b1b1b lineages, both generally known to have expanded within North Africa during the Neolithic. These results provide another piece of evidence of the relatively young population history of North Africa. Am J Phys Anthropol, 2009. © 2009 Wiley‐Liss, Inc.     

Effect of alginite amendment on microbial activity and soil water content in forest soils

The effect of the amendment with alginite, an organic rock originating from the biomass of fossilized unicellular algae, on microbial activity of forest soils was tested using a pot experiment. Five variants of soil-alginite mixtures were tested in three replicates with two forest soils: a loose sandy soil and a sandy loam. Gravimetric moisture closely correlated with the dose of alginite in both soils. Basal respiration and catalase activity increased with the dose of alginite in the sandy soil, but not in the sandy loam, where the highest response was observed at intermediate doses of alginite. The correlations of microbial activity parameters with moisture in the sandy soil were also much closer than in the sandy loam. The amendment with alginite was thus effective in improving some of the selected microbial activity indicators, but the optimum dose of alginite strongly depends on soil texture.