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Jenni Liisa Rahikainen James David Evans Saara Mikander Anna Kalliola Terhi Puranen Tarja Tamminen Kaisa Marjamaa Kristiina Kruus 《Enzyme and microbial technology》2013
Non-productive cellulase adsorption onto lignin is a major inhibitory mechanism preventing enzymatic hydrolysis of lignocellulosic feedstocks. Therefore, understanding of enzyme–lignin interactions is essential for the development of enzyme mixtures and processes for lignocellulose hydrolysis. We have studied cellulase–lignin interactions using model enzymes, Melanocarpus albomyces Cel45A endoglucanase (MaCel45A) and its fusions with native and mutated carbohydrate-binding modules (CBMs) from Trichoderma reesei Cel7A. Binding of MaCel45A to lignin was dependent on pH in the presence and absence of the CBM; at high pH, less enzyme bound to isolated lignins. Potentiometric titration of the lignin preparations showed that negatively charged groups were present in the lignin samples and that negative charge in the samples was increased with increasing pH. The results suggest that electrostatic interactions contributed to non-productive enzyme adsorption: Reduced enzyme binding at high pH was presumably due to repulsive electrostatic interactions between the enzymes and lignin. The CBM increased binding of MaCel45A to the isolated lignins only at high pH. Hydrophobic interactions are probably involved in CBM binding to lignin, because the same aromatic amino acids that are essential in CBM–cellulose interaction were also shown to contribute to lignin-binding. 相似文献
3.
Tapani Repo Anna Korhonen Tarja Lehto Raimo Silvennoinen 《Trees - Structure and Function》2016,30(2):483-495
Key message
A novel non-destructive method is presented for studying the frost hardiness of roots. Principal component analysis from the electrical impedance spectra revealed differences between freezing temperatures, but no clear differences between the mycorrhizal treatments as regards freezing stress.Abstract
We present a novel non-destructive method for the classification of root systems with different degrees of freezing injuries based on the measurement of electrical impedance spectra (EIS). Roots of Scots pine (Pinus sylvestris L.) seedlings, raised in perlite with nutrient solution, were colonized by Hebeloma sp. or Suillus luteus or left non-mycorrhizal, and exposed to a series of low temperatures (5, ?5, ?12 and ?18 °C) after cultivation with and without cold acclimation regimes. In EIS measurements, we ran a small-amplitude electric current to the root system at 44 frequencies between 5 Hz and 100 kHz through electrodes set in the stem and in perlite at the bottom of the container. The normalized (Euclidian) electrical impedance spectra were classified using the CLAFIC-method (CLAss-Featuring Information Compression) that is based on a subspace method with two variants where the longest projection vector defines the sample class. The current delivery through the root system was affected by freezing injuries in the roots. The most remarkable change, indicating the threshold for cold tolerance, took place between ?5 and ?12 °C for non-acclimated and between ?12 and ?18 °C for cold acclimated roots. No difference was found between the mycorrhizal treatments in the response to the freezing temperatures. The results on the effects of both the low-temperature exposure and mycorrhizas agree with freezing damage assessments done by other methods.4.
The European aspen (Populus tremula) is thought to reproduce mostly asexually. Thus aspen forms clones, in which several ramets belong to one genetically defined genet. We compared the clonal structure of aspen in old-growth and managed forests in southern and northeastern Finland. Clones were identified using morphological characters and nine microsatellite loci originally developed for Populus tremuloides. There were more clones identified by microsatellites than morphotypes both in old-growth and managed forest. The average size of the clones was only 2.3 ramets and most clones (70%) consisted of just one ramet. The size of the clones showed no difference between managed and old-growth forests or between northeastern and southern Finland. The small size of the clones suggests that most of them are relatively young. Therefore, sexual reproduction may be more common than previously thought. There was an aggregated spatial genetic structure as measured by Moran's I (0-10 m) and by co-ancestry (rho(ij), 0-20 m). Low level of co-ancestry can be explained by relatively unrestricted gene flow, the important role of disturbance in reproduction, and/or local selection. 相似文献
5.
Tarja Lehto Pedro J. Aphalo Pekka Saranpää Tapio Laakso Aino Smolander 《Plant and Soil》2010,330(1-2):225-238
Adequate boron (B) nutrition may decrease concentrations of phenolic compounds and enhance structural integrity and lignification in plants, compared with suboptimal B. This could affect decomposition in areas where B deficiencies are common. The mass loss and changes in element concentrations in Norway spruce needle litter were studied with combinations of litter from high-B and low-B trees, incubated for 29 months, in either B fertilised or control plots without B addition. The litter originated from the same Norway spruce field experiments. Additionally, the field experiments included long-term N and P treatments. Initially, lowest lignin concentrations were found in Norway spruce litter from the treatment P and particularly in the combination B?+?P, and highest in the B?+?N fertilised plots. The mass loss of Norway spruce litter was not affected by the treatments. However, Blitter increased Cu accumulation. The litter from the B?+?P fertilised plots accumulated considerably more Al, Ca, S and Zn than the other treatments, whereas B together with N reduced the remaining amounts of these elements. Reduced nutrient release from litter may have far-reaching consequences on nutrient cycles in forests. 相似文献
6.
Using the ecosystem services approach for better planning and conservation of urban green spaces: a Finland case study 总被引:6,自引:0,他引:6
Jari Niemelä Sanna-Riikka Saarela Tarja Söderman Leena Kopperoinen Vesa Yli-Pelkonen Seija Väre D. Johan Kotze 《Biodiversity and Conservation》2010,19(11):3225-3243
Ecosystem services are vital for humans in urban regions. However, urban development poses a great risk for the ability of
ecosystems to provide these services. In this paper we first address the most important ecosystem services in functional urban
regions in Finland. Well accessible and good quality recreational ecosystem services, for example, provided by urban nature,
are an important part of a high-quality living environment and important for public health. Vegetation of urban regions can
have a role in carbon dioxide sequestration and thus in climate change mitigation. For instance, estimates of carbon sinks
can be compared to total CO2 emissions of an urban region, and the municipality can aim at both increasing carbon sinks and decreasing CO2 emissions with proper land-use planning. Large and contiguous core nature areas, smaller green areas and ecological connections
between them are the essence of regional ecological networks and are essential for maintaining interconnected habitats for
species and thus biological diversity. Thus, both local and regional level ecological networks are vital for maintaining ecosystem
services in urban regions. The impacts of climate change coupled with land-use and land cover change will bring serious challenges
for maintaining ecosystem services in urban areas. Although not yet widely used in planning practices, the ecosystem services
approach can provide an opportunity for land-use planning to develop ecologically sustainable urban regions. Currently, information
on ecosystem services of urban regions is lacking and there is a need to improve the knowledge base for land-use planning. 相似文献
7.
Laivuori H Lahermo P Ollikainen V Widen E Häivä-Mällinen L Sundström H Laitinen T Kaaja R Ylikorkala O Kere J 《American journal of human genetics》2003,72(1):168-177
Preeclampsia is a common, pregnancy-specific disorder characterized by reduced placental perfusion, endothelial dysfunction, elevated blood pressure, and proteinuria. The pathogenesis of this heterogeneous disorder is incompletely understood, but it has a familial component, which suggests that one or more common alleles may act as susceptibility genes. We hypothesized that, in a founder population, the genetic background of preeclampsia might also show reduced heterogeneity, and we have performed a genomewide scan in 15 multiplex families recruited predominantly in the Kainuu province in central eastern Finland. We found two loci that exceeded the threshold for significant linkage: chromosome 2p25, near marker D2S168 (nonparametric linkage [NPL] score 3.77; P=.000761) at 21.70 cM, and 9p13, near marker D9S169 (NPL score 3.74; P=.000821) at 38.90 cM. In addition, there was a locus showing suggestive linkage at chromosome 4q32 between D4S413 and D4S3046 (NPL score 3.13; P=.003238) at 163.00 cM. In the present study the susceptibility locus on chromosome 2p25 is clearly different (21.70 cM) from the locus at 2p12 found in an Icelandic study (94.05 cM) and the locus at 2q23 (144.7 cM) found in an Australian/New Zealand study. The locus at 9p13 has been shown to be a candidate region for type 2 diabetes in two recently published genomewide scans from Finland and China. The regions on chromosomes 2p25 and 9p13 may harbor susceptibility genes for preeclampsia. 相似文献
8.
Androgen receptor CAG polymorphism and prostate cancer risk 总被引:4,自引:0,他引:4
Mononen N Ikonen T Autio V Rökman A Matikainen MP Tammela TL Kallioniemi OP Koivisto PA Schleutker J 《Human genetics》2002,111(2):166-171
Recent studies have suggested that polymorphisms of the androgen receptor gene ( AR) may influence the risk of prostate cancer (PC) development and progression. Here, we analyzed the length of the CAG repeat of the AR gene in 1363 individuals, including patients with PC, benign prostate hyperplasia (BPH), and population controls. There was a tendency for short CAG repeats to be associated with PC. The Odds Ratio (OR) for PC was 1.47 ( P=0.05) when individuals with short CAG repeats (=18) were compared with those having long repeats (>18). CAG repeat length was not significantly associated with family history, disease stage, grade, age at diagnosis, prostate-specific antigen (PSA) level at diagnosis, or prognosis of the patients. Unexpectedly, short CAG repeats were significantly less common in patients with BPH compared with controls (OR=0.47, P=0.03). Our results suggest that the CAG polymorphism of the AR gene is unlikely to have a major role in the development or progression of PC in the Finnish population. The association of CAG repeats with the risk of BPH warrants further study. 相似文献
9.
Different metabolic responses of human brown adipose tissue to activation by cold and insulin 总被引:1,自引:0,他引:1
Orava J Nuutila P Lidell ME Oikonen V Noponen T Viljanen T Scheinin M Taittonen M Niemi T Enerbäck S Virtanen KA 《Cell metabolism》2011,14(2):272-279
We investigated the metabolism of human brown adipose tissue (BAT) in healthy subjects by determining its cold-induced and insulin-stimulated glucose uptake and blood flow (perfusion) using positron emission tomography (PET) combined with computed tomography (CT). Second, we assessed gene expression in human BAT and white adipose tissue (WAT). Glucose uptake was induced 12-fold in BAT by cold, accompanied by doubling of perfusion. We found a positive association between whole-body energy expenditure and BAT perfusion. Insulin enhanced glucose uptake 5-fold in BAT independently of its perfusion, while the effect on WAT was weaker. The gene expression level of insulin-sensitive glucose transporter GLUT4 was also higher in BAT as compared to WAT. In conclusion, BAT appears to be differently activated by insulin and cold; in response to insulin, BAT displays high glucose uptake without increased perfusion, but when activated by cold, it dissipates energy in a perfusion-dependent manner. 相似文献
10.
Luoto R Kinnunen TI Aittasalo M Kolu P Raitanen J Ojala K Mansikkamäki K Lamberg S Vasankari T Komulainen T Tulokas S 《PLoS medicine》2011,8(5):e1001036