Immunoglobulin G galactosylation and sialylation are associated with pregnancy-induced improvement of rheumatoid arthritis and the postpartum flare: results from a large prospective cohort study

Introduction  

Improvement of rheumatoid arthritis (RA) during pregnancy has been causatively associated with increased galactosylation of immunoglobulin G (IgG) N-glycans. Since previous studies were small, did not include the postpartum flare and did not study sialylation, these issues were addressed in the present study.     

The use of DNA markers to estimate the extent and nature of genetic variability in Solatium tuberosum cultivars

High levels of DNA polymorphism were detected in 27 Solanum tuberosum cultivars examined. Combinations of at least two c-DNA clones have been identified which in conjunction with EcoRI allow important UK potato cultivars to be characterised by their molecular profiles. The widely grown North American cultivar Russett Burbank was also successfully fingerprinted. Estimates of genetic diversity based on restriction fragment length polymorphism (RFLP) data indicate the important role that wild potato species and exotic germplasm have played in the development of the cultivars studied. A graphical method for simultaneously highlighting similarities and differences between genotypes for individual hybridising fragments is presented. This approach is particularly useful in identifying and recording fragments which are unique to certain genotypes. Two potato cultivars: Fiona and Morag produce unique RFLP profiles when digested with EcoRI and EcoRV and probed with a flax ribosomal DNA sequence. Both Fiona and Morag possess incomplete or partial (quantitative) type resistance to G. pallida which was transferred from S. vernei. The preferential transmission of the r-DN A fragments from S. vernei may indicate that this locus is associated with genetic factors controlling resistance to G. pallida.     

Comparing genomic prediction accuracy from purebred,crossbred and combined purebred and crossbred reference populations in sheep

Background

The accuracy of genomic prediction depends largely on the number of animals with phenotypes and genotypes. In some industries, such as sheep and beef cattle, data are often available from a mixture of breeds, multiple strains within a breed or from crossbred animals. The objective of this study was to compare the accuracy of genomic prediction for several economically important traits in sheep when using data from purebreds, crossbreds or a combination of those in a reference population.

Methods

The reference populations were purebred Merinos, crossbreds of Border Leicester (BL), Poll Dorset (PD) or White Suffolk (WS) with Merinos and combinations of purebred and crossbred animals. Genomic breeding values (GBV) were calculated based on genomic best linear unbiased prediction (GBLUP), using a genomic relationship matrix calculated based on 48 599 Ovine SNP (single nucleotide polymorphisms) genotypes. The accuracy of GBV was assessed in a group of purebred industry sires based on the correlation coefficient between GBV and accurate estimated breeding values based on progeny records.

Results

The accuracy of GBV for Merino sires increased with a larger purebred Merino reference population, but decreased when a large purebred Merino reference population was augmented with records from crossbred animals. The GBV accuracy for BL, PD and WS breeds based on crossbred data was the same or tended to decrease when more purebred Merinos were added to the crossbred reference population. The prediction accuracy for a particular breed was close to zero when the reference population did not contain any haplotypes of the target breed, except for some low accuracies that were obtained when predicting PD from WS and vice versa.

Conclusions

This study demonstrates that crossbred animals can be used for genomic prediction of purebred animals using 50 k SNP marker density and GBLUP, but crossbred data provided lower accuracy than purebred data. Including data from distant breeds in a reference population had a neutral to slightly negative effect on the accuracy of genomic prediction. Accounting for differences in marker allele frequencies between breeds had only a small effect on the accuracy of genomic prediction from crossbred or combined crossbred and purebred reference populations.     

Trans‐equatorial migration,staging sites and wintering area of Sabine’s Gulls Larus sabini in the Atlantic Ocean

The migrations and winter distributions of most seabirds, particularly small pelagic species, remain poorly understood despite their potential as indicators of marine ecosystem health. Here we report the use of miniature archival light loggers (geolocators) to track the annual migration of Sabine’s Gull Larus sabini, a small (c. 200 g) Arctic‐breeding larid. We describe their migratory routes and identify previously unknown staging sites in the Atlantic Ocean, as well as their main Atlantic wintering area in the southern hemisphere. Sabine’s Gulls breeding in northeast Greenland displayed an average annual migration of almost 32 000 km (n = 6), with the longest return journey spanning close to 39 000 km (not including local movements at staging sites or within the wintering area). On their southern migration, they spent an average of 45 days in the Bay of Biscay and Iberian Sea, off the coasts of France, Spain and Portugal. They all wintered in close association with the cold waters of the Benguela Upwelling, spending an average of 152 days in that area. On their return north, Sabine’s Gulls staged off the west African coast (Morocco, Mauritania, Senegal), spending on average 19 days at this site. This leg of migration was particularly rapid, birds travelling an average of 813 km/day, assisted by the prevailing winds. Sabine’s Gulls generally followed a similar path on their outbound and return migrations, and did not exhibit the broad figure‐of‐eight pattern (anti clockwise in the southern hemisphere and clockwise in the northern hemisphere) seen in other trans‐equatorial seabirds in the Atlantic and Pacific oceans.     

Diseases of the heart in a working population; a study of morbidity and mortality in relation to cardiac status and nature of job

A sample consisting of 2,252 persons among 20,199 Los Angeles civil service employees was observed for the occurrence of heart disease. The first examination measured the prevalence. Based upon the diagnosis of 165 cases of heart disease, the prevalence was 73 per 1,000 persons examined. Two reexaminations, at intervals of 12 to 18 months, of persons with normal heart on the first examination were carried out and 52 additional cases were diagnosed. There were also 13 deaths of heart disease in persons first diagnosed as having normal heart, making a total of 65 "new" cases (36.6 per 1,000) during the 30-month period of observation. An annual estimated heart disease incidence of 15 per 1,000 appears reasonable. Based on 89 deaths, the cardiovascular disease death rate was 11 per 1,000 among persons entering the study with normal heart, and 133 per 1,000 persons diagnosed as having heart disease at entry. The ratio of newly diagnosed cases to deaths of heart disease was 4 to 1.Among men diagnosed as having normal heart there was little difference in death rates whether their jobs were physically strenuous or sedentary. Among the men with heart disease, however, the highest death rates are observed among those employed at sedentary jobs and at light exertion. This may, of course, be an indication of the employee's selection of the job rather than the effect of inactivity. The relative usefulness of minifilm x-ray, electrocardiograms and questioning as to history were considered.     

Rio Grande Wild Turkey Habitat Selection in the Southern Great Plains

ABSTRACT We recorded telemetry locations from 1,129 radiotagged turkeys (Meleagris gallopavo intermedia) on 4 study areas in the Texas Panhandle and southwestern Kansas, USA, from 2000 to 2004. Analyses of telemetry locations indicated both sexes selected riparian vegetative zones. Females did not select grazed or nongrazed pastures for daily movements. However, females did select nongrazed pastures for nest sites on 2 study areas and males selected for grazed pastures at one study area during the breeding season. We compared nest sites (n = 351) to random sites using logistic regression, which indicated height of visual obstruction, percent canopy cover, and percent bare ground provided the highest predictive power (P ≤ 0.003) for characteristics describing nest-site selection. Nest-site vegetative characteristics between vegetative zones differed primarily in composition: upland zone nest sites had more (P ≤ 0.001) shrubs and riparian zone nest sites had more (P ≤ 0.001) grass. There were no differences in measured nest site vegetative characteristics between pasture types, but there were differences between available nesting cover in grazed and nongrazed pastures. Random plots in grazed pastures had less grass cover (P ≤ 0.001) and more bare ground (P = 0.002). Because of cattle impacts on average grass height and availability, grazing would likely have the highest impact on nesting in riparian zones due to turkey use of grass as nesting cover. An appropriate grazing plan to promote Rio Grande turkey nesting habitat would include grazing upland zones in the spring, when it likely has little impact on nesting-site selection, and grazing riparian zones following breeding season completion. Grazing at light to moderate intensities with periods of rest did not affect male turkey pasture use and may have continued to maintain open areas used by male turkeys for displaying purposes.     

Breeding frequency in Grey-headed Albatrosses Thalassarche chrysostoma

Although Grey-headed Albatrosses Thalassarche chrysostoma are usually regarded as biennial breeders, taking a year off following a successful breeding attempt, a small proportion of successful birds attempt to breed annually. This proportion was higher at Marion Island (5.4%) than at Bird Island, South Georgia (1.0%), suggesting that conditions are more favourable at Marion Island. This hypothesis is supported by higher average breeding success and shorter lags following both successful and failed breeding attempts at Marion Island. Factors favouring reproduction at Marion Island may include reduced intraspecific competition (given the much smaller breeding population) and/or more predictable food supply (owing to production of meso-scale eddies associated with the Indian Ocean Ridge). Although annual breeding appeared to increase the risk of adult mortality, with several birds that attempted to breed annually found dead the following year, at least some birds greatly enhanced their reproductive output, with one male raising five chicks in five successive years. Contrary to life-history theory, there was no evidence that older birds were more likely to attempt annual breeding because of declining reproductive value.     

Geographical and seasonal gradients in hatching failure in Eastern Bluebirds Sialia sialis reinforce clutch size trends

Eggs untended during the laying phase can lose viability if exposed to high temperatures, such as those common at lower latitudes and late in the nesting season. The egg‐viability hypothesis states that constraints on viability during the laying phase could account for latitudinal and seasonal gradients in clutch size. We used 7 years’ worth of data collected by volunteers (The Birdhouse Network, co‐ordinated by the Cornell Laboratory of Ornithology) to look simultaneously at populations across the temperate breeding range of Eastern Bluebirds Sialia sialis in order to test three predictions of the egg‐viability hypothesis: the probability of hatching failure decreases at higher latitude and increases later in the season, and that these trends are strongest among large clutches. The overall average number of unhatched eggs relative to the total number of eggs laid was similar to that found by other studies (7.8%; range 6.8–8.9% annually; n = 32 567 eggs from 7231 nests from 530 study sites). Using generalized linear mixed models that controlled for the non‐independence of eggs within a clutch, we found that the ‘per‐egg’ probability of hatching failure was highest late in the season, highest at lower latitudes, and highest for both small (three‐egg) and large (six‐egg) clutches. The seasonal and geographical gradients in egg hatching failure reinforce documented seasonal and geographical trends in clutch size. Loss of egg viability prior to incubation currently provides the most parsimonious and consistent explanation of the observed patterns of hatching failure. However, alternative explanations for large‐scale patterns, particularly those not consistent with the egg‐viability hypothesis, warrant further research into other causes of hatching failure, such as microbes and infertility (related to extra‐pair mating). Our results demonstrate that investigating causes of variation in demography among local populations across a geographical gradient provides a potential means of identifying selection pressures on life‐history traits.