TUBA8: A new tissue-specific isoform of alpha-tubulin that is highly conserved in human and mouse

We have cloned and sequenced a cDNA from a human adult skeletal muscle cDNA library, encoding for a novel isoform of alpha-tubulin (tuba8) that is preferentially expressed in heart, skeletal muscle, and testis. A genomic DNA sequence from the chromosomal region 22q11 allowed us to determine the complete structure of the TUBA8 gene that mirrors the canonical exon/intron organization of the vertebrate alpha-tubulin genes. We also cloned and sequenced the cDNA of its murine homologue (MMU-TUBA8). The latter encodes for a protein that differs from its human counterpart in only three amino acids, revealing an extreme rate of conservation that is even extended to both the 3' and 5' UTRs of the mRNAs. Sequence comparison of these novel isoforms with other known alpha tubulins shows that tuba8 is the most divergent member of the mammalian alpha-tubulin family. The sequence peculiarity of the human and murine tuba8 strongly suggests that they might have functional significance and, according to the multi-tubulin hypothesis, that they might play specific functional roles in the cell cytoskeleton.     

Non-apoptotic programmed cell death induced by a copper(II) complex in human fibrosarcoma cells

A₀, a Cu(II) thioxotriazole complex, produces severe cytotoxic effects on HT1080 human fibrosarcoma cells with a potency comparable to that exhibited by cisplatin. A₀ induced a characteristic series of changes, hallmarked by the formation of eosin- and Sudan Black-B-negative vacuoles. No evidence of nuclear fragmentation or caspase-3 activation was detected in cells treated with A₀ which, rather, inhibited cisplatin-stimulated caspase-3 activity. Membrane functional integrity, assessed with calcein and propidium iodide, was spared until the late stages of the death process induced by the copper complex. Vacuoles were negative to the autophagy marker monodansylcadaverine and their formation was not blocked by 3-methyladenine, an inhibitor of autophagic processes. Negativity to the extracellular marker pyranine excluded vacuole derivation from the extracellular fluid. Ultrastructural analysis indicated that A₀ caused the appearance of many electronlight cytoplasmic vesicles, possibly related to the endoplasmic reticulum, which progressively enlarge and coalesce to form large vacuolar structures that eventually fill the cytoplasm. It is concluded that A₀ triggers a non-apoptotic, type 3B programmed cell death (Clarke in Anat Embryol (Berl) 181:195–213, 1990), characterized by an extensive cytoplasmic vacuolization. This peculiar cytotoxicity pattern may render the employment of A₀ to be of particular interest in apoptosis-resistant cell models.     

Fine structural observations on the ciliary receptors in the epidermis of three otoplanid species (Turbellaria proseriata).

In Notocaryoturbella bigermaria, Otoplana truncaspina and Paroto-planella heterorhabditica three types of epidermal receptors are recognized. Type I: with a single cilium running in a duct, piercing the distal dendrite process of the receptor. The internal wall of the dendrite process has eight ridges with longitudinal filaments lying inside them. The ciliary basal body lacks a longitudinal rootlet but is encircled by a thin annular formation. Type II: with a single (A) or several (B) cilia which protrude from the outer epithelial surface and are provided with a large and striped rootlet. Both types are considered as mechanoreceptors. Type III: with two or more short and stumpy cilia devoid of rootlets and displaying the usual 9 + 2 pattern in the proximal part only. They are considered as chemoreceptors.     

Ultrastructure of the photoreceptors of Allostoma sp. (Plathelminthes,Prolecithophora)

The four eyes of the prolecithophoran Allostoma sp. are disposed in two pairs in a dorsolateral position at the periphery of the brain and beneath its capsule. They are rhabdomeric pigment-cup ocelli. Each eye in the anterior pair consists of one pigment cell and one receptor cell; each in the posterior pair is made up of a larger, single pigment cell and two photoreceptor cells. A lens in front of the pigment cell's aperture is formed by electron-dense, refractive, finger-like protrusions which arise from unpigmented cytoplasmic extensions of the pigment-cup margin. Degenerative signs are sometimes visible in the lens.     

The Eyes of Mesostoma ehrenbergi (Focke, 1836) (Platyhelminthes,Rhabdocoela). Fine Structure and Photoreceptor Membrane Turnover

Abstract Each pigment-cup eye of Mesostoma ehrenbergi consists of two photoreceptor cells, the anterior cell being bilobate. the posterior almost linear, and of a multicellular pigment cup. The nuclei of the photoreceptor cells are located inside the medial region of the brain. Thin cytoplasmic photoreceptor projections provided with neurosecretory-like granules are interposed between the inner surface of the eye cup and the distal extremity of the microvilli. The breakdown and renewal of microvillar membranes was analysed. Membrane turnover is a continuous process. At dusk and during the night abscission of photoreceptive membranes occurs. At dawn the membrane fragments are degraded to granular material, which is then endocytosed into the submicrovillar cytoplasm as coated vesicles. These vesicles form multivesicular bodies. The degradation of multivesicular body content occurs during the following light hours. The dark period is correlated with membrane synthesis for elongation of reticular membranes, which are converted into ellipsoid bodies. The formation of new microvillar membranes occurs at the base of the microvillar border, and involves the fusion with the old microvillar membranes of small vesicles detached from the tubular endoplasmic membranes and from the flattened concentric cisternae of ellipsoid bodies. The correlations with daily cycles of other invertebrates are discussed.     

Seasonal stability and spatial variability of parasites in Brazilian sandperch Pinguipes brasilianus from the Northern Argentine Sea: evidence for stock discrimination

The use of parasites as biological tags allowed the identification of two stocks of Brazilian sandperch Pinguipes brasilianus , in the Bonaerense region of the Argentine Sea. A total of 156 adult specimens of P. brasilianus were examined for parasites. Temporal variability in parasite burdens was assessed from fish caught seasonally in coastal waters of two zones, south Bonaerense (during autumn and winter) and north Bonaerense (during summer). Additional data from a previous study, comprising P. brasilianus caught during spring in these two zones, as well as in two populations from north Patagonian gulfs were used for comparative analyses of spatial variability. A total of 14 193 metazoan parasites belonging to 19 species were found. Comparisons of seasonal variability in pooled samples and within each locality showed that locality effects exceeded seasonal ones, suggesting the possible existence of two discrete stocks in the Bonaerense region. These findings were strongly supported by discriminant analyses and comparisons of prevalence and abundance between zones, after pooling seasonal samples within each zone. Further evidence of the discreteness of both stocks was assessed by inclusion of samples from Patagonian gulfs in the discriminant analysis, confirming that their differences were at a inter-population level. The parasite species that contributed most to the separation of the samples were generally those identified as biological markers in previous studies. Differing oceanographic conditions are discussed as potential causes of inter-population variation of parasite burdens.     

Hypertrophic cardiomyopathy: two homozygous cases with "typical" hypertrophic cardiomyopathy and three new mutations in cases with progression to dilated cardiomyopathy

About 10% of cases of hypertrophic cardiomyopathy (HCM) evolve into dilated cardiomyopathy (DCM) with unknown causes. We studied 11 unrelated patients (pts) with HCM who progressed to DCM (group A) and 11 who showed "typical" HCM (group B). Mutational analysis of the beta-myosin heavy chain (MYH7), myosin-binding protein C (MYBPC3), and cardiac troponin T (TNNT2) genes demonstrated eight mutations affecting MYH7 or MYBPC3 gene, five of which were new mutations. In group A-pts, the first new mutation occurred in the myosin head-rod junction and the second occurred in the light chain-binding site. The third new mutation leads to a MYBPC3 lacking titin and myosin binding sites. In group B, two pts with severe HCM carried two homozygous MYBPC3 mutations and one with moderate hypertrophy was a compound heterozygous for MYBPC3 gene. We identified five unreported mutations, potentially "malignant" defects as for the associated phenotypes, but no specific mutations of HCM/DCM.     

Study of Siphonaptera in Somalia

In the period 1982-1984 samples of fleas were collected from wild animals of the Middle Scebeli, Low Scebeli and Bay Regions of Somalia. In total 1,335 specimens (486 males and 849 females) were obtained from 17 species of mammalian hosts out of the 19 examined. The following species of fleas were identified: Echidnophaga gallinacea, E. larina, E. murina, Ctenocephalides felis strongylus, Synosternus burtoni, S. somalicus, S. burtoni, S. somalicus, C. felis strongylus and E. larina are known to be widespread in Somalia; on the contrary, the presence of E. gallinacea in this country has not been reported in the literature, though the flea collection of the Institute of Parasitology of the University of Rome owns five females of this species which were collected by Zavattari in South Somalia during the year 1933. Moreover, as far as it is known, E. murina has not been reported in Somalia until now. The spermatheca of the females identified as S. burtoni is described in detail as it shows characteristics which have not been apparently reported before.     

Tissue-Specific Expression and Regulatory Networks of Pig MicroRNAome

Background

Despite the economic and medical importance of the pig, knowledge about its genome organization, gene expression regulation, and molecular mechanisms involved in physiological processes is far from that achieved for mouse and rat, the two most used model organisms in biomedical research. MicroRNAs (miRNAs) are a wide class of molecules that exert a recognized role in gene expression modulation, but only 280 miRNAs in pig have been characterized to date.

Results

We applied a novel computational approach to predict species-specific and conserved miRNAs in the pig genome, which were then subjected to experimental validation. We experimentally identified candidate miRNAs sequences grouped in high-confidence (424) and medium-confidence (353) miRNAs according to RNA-seq results. A group of miRNAs was also validated by PCR experiments. We established the subtle variability in expression of isomiRs and miRNA-miRNA star couples supporting a biological function for these molecules. Finally, miRNA and mRNA expression profiles produced from the same sample of 20 different tissue of the animal were combined, using a correlation threshold to filter miRNA-target predictions, to identify tissue-specific regulatory networks.

Conclusions

Our data represent a significant progress in the current understanding of miRNAome in pig. The identification of miRNAs, their target mRNAs, and the construction of regulatory circuits will provide new insights into the complex biological networks in several tissues of this important animal model.