Coalescent species delimitation of a Sumatran parachuting frog

We conduct species delimitation of the widespread parachuting frog species Rhacophorus catamitus using samples from across the island of Sumatra, Indonesia. We use mitochondrial, genomic and morphological data, and find that R. catamitus is composed of three lineages corresponding to northern, central and southern lineages. Mitochondrial and genomic data show admixture or incomplete lineage sorting between the central and southern lineages, but deep divergence from the northern lineage. Coalescent species delimitation supports a three species model for this complex, and we recommend that the northern lineage be described as a new species. Our study highlights the power of coalescent species delimitation in an integrative framework for identifying unrecognised diversity in understudied tropical species complexes. We also emphasise the evolutionary importance of northern Sumatra, a region that harboured montane refugia during Pliocene–Pleistocene climate change, but has also been heavily affected by volcanic activity.     

中药黄芪植物分类及其区系地理分布研究

确认了中药黄芪的原植物有膜荚黄芪(Astragalus membranaceus (Fisch.) Bunge)、蒙古黄芪(A. mongholicus Bunge)和北蒙古黄芪(A. borealimongolicus Y. Z. Zhao)3种,其中北蒙古黄芪为一新种;确定了这三种植物的区系地理成分：膜荚黄芪为东亚北部—西伯利亚南部森林带的分布种,蒙古黄芪为华北森林草原带的分布种,北蒙古黄芪为蒙古高原北部草原带的分布种,3种黄芪存在着明显的地理替代分布格局。     

The genus Chaerilus Simon, 1877 in Vietnam (Scorpiones; Chaerilidae): A possible case of a vicariant species

A new species of the genus Chaerilus Simon, 1877 is described from a cave in Dien Bien District, West of Dien Bien Phu city in northern Vietnam. The new species is morphologically similar to other Chaerilus species distributed only in the south of Vietnam and Cambodia and suggests a case of a vicariant species between northern and southern populations in the Southeast Asian peninsula.     

Status of breeding seabirds on the Northern Islands of the Red Sea,Saudi Arabia

We undertook breeding surveys between 2010 and 2011 to assess the status of breeding birds on 16 islands in the northern Saudi Arabia. Sixteen bird species were found breeding at three different seasons; i.e. winter (Osprey), spring (Caspian and Saunder’s Terns), and summer (Lesser Crested, White-cheeked, Bridled Terns). It is postulated that food availability is an important factor influencing the breeding of seabirds in the northern Saudi Arabian Red Sea. Several species laid eggs earlier in northern parts of the Red Sea than in southern parts. The predicted increases in temperatures (T_a) could have a negative effect on species survival in the future, especially on those whose nests that are in the open. Finally, disturbance, predation and egg collection were probably the main immediate threats affecting the breeding seabird species in the northern Red Sea.     

Tree-ring records from Nothofagus dombeyi: A preliminary chronology network in Northern Patagonia,Argentina

Most of the dendrochronological efforts in northern Patagonia have been invested in long-lived conifer species, whereas several broadleaf species have received less attention. This is the case for Nothofagus dombeyi, a dominant species in the mesic temperate and rainforests in the region. The aim of this study was to develop the first tree-ring chronologies for N. dombeyi in northern Patagonian and contribute to the future dendroecological and dendroclimatological studies in the region. Using standard dendrochronological techniques, six tree-ring-width chronologies were obtained encompassing the east–west precipitation gradient of this species in the Argentinean sector of the northern Patagonian Andes. Chronology statistics indicated that N. dombeyi records are highly reliable and a good source of information on tree-growth variability in the region. Stands located in the xeric sectors of the gradient showed higher inter-site variability. Also, results presented here showed that N. dombeyi has a large potential for the study of climatic variability in northern Patagonia.     

A multispecies approach to manage effects of land cover and weather on upland game birds

Loss and degradation of grasslands in the Great Plains region have resulted in major declines in abundance of grassland bird species. To ensure future viability of grassland bird populations, it is crucial to evaluate specific effects of environmental factors among species to determine drivers of population decline and develop effective conservation strategies. We used threshold models to quantify the effects of land cover and weather changes in "lesser prairie‐chicken" and "greater prairie‐chicken" (Tympanuchus pallidicinctus and T. cupido, respectively), northern bobwhites (Colinus virginianus), and ring‐necked pheasants (Phasianus colchicus). We demonstrated a novel approach for estimating landscape conditions needed to optimize abundance across multiple species at a variety of spatial scales. Abundance of all four species was highest following wet summers and dry winters. Prairie chicken and ring‐necked pheasant abundance was highest following cool winters, while northern bobwhite abundance was highest following warm winters. Greater prairie chicken and northern bobwhite abundance was also highest following cooler summers. Optimal abundance of each species occurred in landscapes that represented a grassland and cropland mosaic, though prairie chicken abundance was optimized in landscapes with more grassland and less edge habitat than northern bobwhites and ring‐necked pheasants. Because these effects differed among species, managing for an optimal landscape for multiple species may not be the optimal scenario for any one species.     

Comparison of whole mitochondrial genome sequences of northern and southern white rhinoceroses (<Emphasis Type="Italic">Ceratotherium simum</Emphasis>): the conservation consequences of species definitions

The probable extinction of the last confirmed population of northern white rhinoceros (Ceratotherium simum cottoni) in the world has ignited debate regarding its species status compared to the southern white rhinoceros (Ceratotherium simum simum). Previous studies, based on partial mitochondrial sequences, have reported conflicting results regarding the species status of the northern white rhinoceros. We use whole mitochondrial genomes obtained using Next Generation Sequencing of four northern white rhinoceros and three southern white rhinoceros using novel primers in three overlapping fragments. Phylogenetic relationships were constructed, using Maximum Likelihood, and recovered monophyletic clades for northern white rhinoceros and southern white rhinoceros. The divergence time between the two mitochondrial DNA lineages was estimated to be between 0.46 and 0.97 million years ago using Bayesian inferences. Since there are currently only three surviving northern white rhinoceros individuals these results put into sharp focus the ongoing debate regarding the methods of species definition, and in particular the consequences of such definitions in conservation management of endangered species and subspecies. We conclude that the designation of sub-species status is more applicable to northern and southern white rhinoceros.     

Patterns of climate‐induced density shifts of species: poleward shifts faster in northern boreal birds than in southern birds

Climate change has been shown to cause poleward range shifts of species. These shifts are typically demonstrated using presence–absence data, which can mask the potential changes in the abundance of species. Moreover, changes in the mean centre of weighted density of species are seldom examined, and comparisons between these two methods are even rarer. Here, we studied the change in the mean weighted latitude of density (MWLD) of 94 bird species in Finland, northern Europe, using data covering a north–south gradient of over 1000 km from the 1970s to the 2010s. The MWLD shifted northward on average 1.26 km yr^?1, and this shift was significantly stronger in northern species compared to southern species. These shifts can be related to climate warming during the study period, because the annual temperature had increased more in northern Finland (by 1.7 °C) than in southern Finland (by 1.4 °C), although direct causal links cannot be shown. Density shifts of species distributed over the whole country did not differ from shifts in species situated on the edge of the species range in southern and northern species. This means that density shifts occur both in the core and on the edge of species distribution. The species‐specific comparison of MWLD values with corresponding changes in the mean weighted latitude using presence–absence atlas data (MWL) revealed that the MWLD moved more slowly than the MWL in the atlas data in the southern species examined, but more rapidly in the northern species. Our findings highlight that population densities are also moving rapidly towards the poles and the use of presence–absence data can mask the shift of population densities. We encourage use of abundance data in studies considering the effects of climate change on biodiversity.     

南岭南北坡灰蝶的区系组成与生态分布

南岭是我国重要的动植物发源地和保存地,研究南岭蝴蝶的区系和生态分布对保护蝴蝶的多样性具有重要意义。通过对南岭中段南北坡的灰蝶进行多年的调查,结果表明:南岭保护区共记录到灰蝶101种,82.178%的种分布在东洋区。按中国动物区系划分,南岭灰蝶主要分布在华南、华中、西南三个区。从灰蝶在南岭南北坡的分布来看,2012-2014年在南北坡调查点共发现灰蝶865头,分别属于31个种,其中南坡共发现470头(隶属于27个种)、北坡228头(隶属于13个种)。这说明南坡的灰蝶种数多,是北坡种数的2倍;南坡的种群密度也比北坡高,是北坡的2.06倍。从同一坡向不同海拔来看,南坡1000-1100 m与500-600 m两个海拔的灰蝶种类数相同,但前者的种群密度为后者的1.55倍;北坡灰蝶种数与种群密度1000-1100 m均高于500-600 m;山顶灰蝶种类少。     

Differentiation in developmental rate across geographic regions: a photoperiod driven latitude compensating mechanism?

Genetic differentiation and phenotypic plasticity in growth rates along latitudinal gradients may benefit our understanding of latitudinal compensating mechanisms in life history patterns. Here we explore latitudinal compensatory growth mechanisms with respect to photoperiod in northern and southern populations of two damselfly species, Coenagrion puella and C. pulchellum. In addition we compared size of field‐collected adults from southern and northern populations. Eggs from females in copulating tandems were collected at two or three localities for each species in each geographic region. Eggs were transported to the laboratory and the experiment started when the eggs hatched. The role of photoperiod on the expression of larval growth rate was evaluated under controlled laboratory conditions. Both species had lower growth rate when reared in the northern photoperiod, which is counter to expectations if species use photoperiodic cues to trigger compensatory growth. Instead, both species displayed countergradient variation in growth rates, which probably enable northern populations to compensate for the shorter growth season in the north. The smaller size of field‐collected adults from northern populations also supports the view that these species compensate for the shorter growth season by investing in growth and development but accomplish this at the expense of decreased final size.     

秦岭太白山区蝶类多样性的研究

秦岭太白山北坡蝶类组成共有78种,隶属6个科,43属。其中凤蝶科Papilionidae 3属8种,粉蝶科Pieridne 7属19种,眼蝶科sartyridae 5属9种,蛱蝶科Nymphalidae 15属27种,友蝶科Lycaenidae 7属8种,弄蝶科Hesperiidae 6属7种。新记录3种。     

Geographical distribution of Polycelis (Seidlia) auriculata in Japan

Polycelis (Seidlia) auriculata is endemic to mountain districts of Japan, from the central part of Honshû to the area of the Daisetsu Mts of Hokkaidô. In northern Japan, it sometimes occurs in cold-water biotopes of lowland areas. The progenitor of P. auriculata appears to have been the oldest immigrant into northern Japan among the Japanese Polycelis species, entering through a northern route as a preglacial faunal element. P. auriculata now shows a discontinious distribution in northern Japan. By virtue of its geographical and vertical distribution, ecological niche, variation in anatomy of the copulatory apparatus, and cytodemes, this species appears to be in the process of transformation.     

The demography of range boundaries versus range cores in eastern US tree species

Regional species–climate correlations are well documented, but little is known about the ecological processes responsible for generating these patterns. Using the data from over 690 000 individual trees I estimated five demographic rates—canopy growth, understorey growth, canopy lifespan, understorey lifespan and per capita reproduction—for 19 common eastern US tree species, within the core and the northern and southern boundaries, of the species range. Most species showed statistically significant boundary versus core differences in most rates at both boundary types. Differences in canopy and understorey growth were relatively small in magnitude but consistent among species, being lower at the northern (average −17%) and higher at the southern (average +12%) boundaries. Differences in lifespan were larger in magnitude but highly variable among species, except for a marked trend for reduced canopy lifespan at the northern boundary (average −49%). Differences in per capita reproduction were large and statistically significant for some species, but highly variable among species. The rate estimates were combined to calculate two performance indices: R₀ (a measure of lifetime fitness in the absence of competition) was consistently lower at the northern boundary (average −86%) whereas Z^* (a measure of competitive ability in closed forest) showed no sign of a consistent boundary–core difference at either boundary.     

Ecological description of ground beetle communities (Coleoptera, Carabidae) in northern taiga meadows of Arkhangelsk Region

Species composition and ecological structure of ground beetle population was studied in northern taiga meadows of the Arkhangelsk Region. Meadows in the northern forest zone proved to harbor 91 ground beetle species. Carabid complexes formed in the intrazonal biocenoses of the northern forest zone can be as rich as the family topical groups in the southern forest zone by the number of species and ecological diversity. Ecological properties of the fauna and ground beetle population proved similar in different parts of the forest zone. The proportion of stenobiotic meadow species proved to decrease while that of ecologically plastic ones increased from south to north. The proportion of the genus Harpalus decreased in the ground beetle population while the number of Amara species remained unaltered and their abundance increased. The changes in the species composition caused no transformation of the ecological structure of ground beetle population since they were limited to a single life form or guild.     

Pinda shrirangii,a new elegant species of Apiaceae from the northern Western Ghats,India

A new species, Pinda shrirangii Gosavi & Chandore, is described and illustrated from a high-elevation region of northern Western Ghats, India. The new species is closely allied to the only other species in the genus, Pinda concanensis (Dalzell) P.K.Mukh. & Constance which was also described from the northern Western Ghats of Maharashtra state of India. Coloured photographs and illustrations are provided to facilitate the identification.     

Mountains too high and valleys too deep drive population structuring and demographics in a Qinghai–Tibetan Plateau frog Nanorana pleskei (Dicroglossidae)

Pleistocene glacial–interglacial climatic oscillations greatly shaped the current genetic structure of many species. However, geographic features may influence the impact of climatic cycling. Distinct geographic and environmental characters between northern and southern parts of the eastern Qinghai–Tibetan Plateau (EQTP) facilitate explorations into the impacts of geographic features on species. The northern parts of EQTP contain large areas of marsh, and the environment is rather homogeneous. In contrast, the southern EQTP harbors complex alpine valleys and a much more heterogeneous setting. We evaluate DNA sequence variation from both the mitochondrial and nuclear genomes in Nanorana pleskei, a species endemic to the EQTP. Hypothesis testing on the evolutionary history of N. pleskei indicates that northern populations can disperse freely, but alpine valleys isolate southern populations. Demographic histories between northern and southern populations also differ. Northern populations appear to have experienced population expansions, while southern frogs exhibit a far more stable demographic history. By combining climatic analyses and species' distribution models, our study suggests that geographic and environmental features drive the differences between the northern and southern EQTP.     

Possible effects of habitat fragmentation and climate change on the range of forest plant species

Global circulation models predict an increase in mean annual temperature between 2.1 and 4.6 °C by 2080 in the northern temperate zone. The associated changes in the ratio of extinctions and colonizations at the boundaries of species ranges are expected to result in northward range shifts for a lot of species. However, net species colonization at northern boundary ranges, necessary for a northward shift and for range conservation, may be hampered because of habitat fragmentation. We report the results of two forest plant colonization studies in two fragmented landscapes in central Belgium. Almost all forest plant species (85%) had an extremely low success of colonizing spatially segregated new suitable forest habitats after c . 40 years. In a landscape with higher forest connectivity, colonization success was higher but still insufficient to ensure large-scale colonization. Under the hypothesis of net extinction at southern range boundaries, forest plant species dispersal limitation will prevent net colonization at northern range boundaries required for range conservation.     

Habitat distribution and conservation of land bird populations in northern Norway

About 300 km line transect censuses of breeding land birds were made in northern Norway in 1974–76. The data (1020 pairs in 26 samples) were grouped into seven major habitats: stony ground and oceanic heath (C1), continental dry heath (C2). "'2Calcarius heath", dry peatland, wet peatland (C5), meagre and average birch forest, and rich birch forest (C7). Bird density ranged from 22 pairs km⁻² (C2) to 364 pairs km⁻² (C7), but most habitats had 67–96 pairs km⁻². The bird communities are described.
Defining the Optimal habitat for a species as the maximum-density habitat, the 43 species observed were found to comprise three major groups: tundra species (optimal habitat C1), peatland species (C5) and forest species (C7). Species whose central range includes northern Norway had a broader habitat amplitude than those with a southern or a very northern distribution. A new index was devised for the evaluation of the conservational importance of a habitat or a species. From the North European standpoint. C1 is certainly the most important habitat in northern Norway, as C1 supports many species which are rare in other parts of North Europe. However, population trends should also be taken into account when conservational preferences are judged.     

Response of predatory snails to a novel prey following the geographic range expansion of an intertidal barnacle

During a geographic range expansion, the success of a species colonizing a new region may be influenced by how resident predators respond to this novel prey. The volcano barnacle Tetraclita rubescens has recently expanded its range > 300 km northward along the coast of California, USA. In the historic portion of its range, Tetraclita is preyed upon by a southern dogwhelk, Nucella emarginata. In newly colonized northern habitats, Tetraclita has joined an assemblage of mid-intertidal barnacles preyed upon by two species of northern dogwhelks (N. ostrina and N. canaliculata). Using a combination of field enclosures and laboratory experiments, we tested the impacts of northern whelks on volcano barnacles relative to other barnacle species. In the field, juvenile Tetraclita were rarely consumed. In laboratory trials with larger barnacles, Tetraclita were nearly immune to drilling by northern whelks, perhaps due to superior morphological defenses. In all experiments, prior encounters with Tetraclita did not appear to increase the frequency of predation on this barnacle; northern whelk species rarely preyed on Tetraclita even when collected from a site where this barnacle was abundant. In contrast, the southern whelk N. emarginata readily preyed on Tetraclita in laboratory trials, perhaps reflecting a longer shared evolutionary history between these species. Overall, our results suggest that the success of a population established beyond a species' historical range boundary may be influenced by the functional traits of that species in relation to the composition and evolutionary history of the surrounding community.     

The phytogeography ofCladophora (Chlorophyceae) in the northern Atlantic Ocean,in comparison to that of other benthic algal species

About 43Cladophora species inhabit the coasts of the northern Atlantic Ocean. These can be subdivided into seven distribution groups: (a) the tropical western Atlantic group (16 species); (b) the warm temperate Mediterranean-Atlantic group (9 species); (c) the warm temperate North American group (1 species); (d) the Arctic group (1 species); (e) the amphiatlantic tropical to warm temperature group (7 species); (f) the amphiatlantic tropical to temperate group (4 species), and (g) the amphiatlantic temperate group (5 species). These groups agree with general phytogeographic patterns. Thus, the high numbers of species restricted to the tropical western Atlantic region and the warm temperate Mediteranean-Atlantic region are in agreement with the richness and high degree of endemism of these regions. The fact that all species occurring in northeast America also occur in Europe agrees with the high floristic similarity of the boreal areas in America and Europe. The sediment coasts of the Carolinas are an efficient barrier to the south-north dispersal of benthic algae. The temperature bound phytogeographic limits are set in most cases by the species ability to survive adverse temperatures; for “northern” species to survive a high summer temperature in the south, and for “southern” species to survive a low winter temperature in the north. The limits in the Arctic region are all set by the species ability for sufficient growth and reproduction in summer. Conversely, only few northern species have a southern limit which is set by a winter temperature that is not too high for sufficient growth and reproduction. Most species of this group are winter-annuals at their southern limit, and summer-annuals at their northern limit. A comparatively small number of species with a tropical-to-warm temperate distribution have a northern limit at temperate latitudes which is set by a sufficiently high summer temperature for growth and reproduction. A high proportion of this group are lagoonal or quiet water species, which profit by higher summer temperatures in sheltered waters.C. vagabunda is an example.C. rupestris andC. sericea have an amphiboreal distribution and also occur in the southern temperate belt. They probably used a Pleistocene temperature drop to disperse, through the Atlantic along the African coast, from one hemisphere to the other. In the Pacific temperatures were not sufficiently low for this dispersal; and hence these two species reached the Pacific probably by way of the Bering Strait.