Investigating the response of soil and vegetable crops to poultry and cow manure using ground and satellite data

Based on the massive production of cow and poultry manures, farmers in Saudi Arabia are moving towards the application of organic fertilizers in their farms. Therefore, the present work was conducted to study the response of soil and selected vegetable crops to poultry and cow manures, using ground data and Landsat-8 and Hyperion images. The studied vegetable crops are cabbage, cauliflower, broccoli, and lettuce. A total of 100 t ha^?1 organic manures were applied as a pre-planting treatment. A 12.5 ha field in Tawdeehiya Farms, 200 km southeast of Riyadh, was earmarked for this study. The field was divided into sectors cultivated with the above-mentioned vegetable crops. Soil characteristics, including the soil pH, the electric conductivity (EC), the nitrogen (N), the phosphorus (P) and the potassium (K), were examined before the application of manures and 25 days after the transplanting process. Observations on crops chlorophyll content, number of leaves, the diameter of merchantable products and yield were also investigated. Furthermore, the relationship between the crop performance and yield was investigated through the satellite images generated vegetation indices (VIs). This study revealed the better performance of poultry manure compared to cow manure in terms of development and production parameters of the experimental crops. Dynamics of the chlorophyll content across the crop growth period revealed that all the tested crops responded significantly (R² = 0.69; P = 0.001) to the poultry manure treatments. Among the tested crops, the chlorophyll content, curd or head sizes and crop yields were quite better in poultry manure applied plots. The investigation of crop yield was significant with poultry manure (R² = 0.64; P = 0.001) than cow manure (R² = 0.57; P = 0.001) using the OSAVI and mNDVI, respectively.     

Nitrogen and phosphorus content of flow from drains fertilized with cow manure slurry

Summary The rate of flow and nitrate and phosphorus content of the water from four drained sandy and clayey plots of size 12×60 m cropped to continuous corn were determined following two annual applications of different rates (0, 260, 390 and 520 kg N/ha) of cow manure slurry. The drain flow was directly related to the rainfall and was greatly influenced by soil texture. The N losses were greater in 1972 (7.8 to 19.1 kg N/ha) than in 1971 (0.4 to 7.8 kg N/ha) because of more summer rainfall. Nitrogen and phosphorus losses were larger from the sandy plots than from the clayey plots. The manure application rates had no apparent effect on nitrogen losses in the drain water.     

Survival of Escherichia coli O157:H7 and Salmonella typhimurium in cow manure and cow manure slurry

An exponential linear destruction was observed for Escherichia coli O157:H7 and Salmonella typhimurium in cattle manure and manure slurry stored at 4, 20 or 37 degrees C. The resulting decimal reduction times ranged from 6 days to 3 weeks in manure and from 2 days to 5 weeks in manure slurry. The main effects of time as well as temperature were pronounced with the most rapid destruction at 37 degrees C. The ammonia concentration in manure increased slightly during storage but did not exceed 0.1%. pH values in the deeper layers of manure remained constant except at 37 degrees C when the pH increased by 1 unit in 60 days. In the surface layers of manure, pH increased by 1.5-2 units, the oxidation-reduction potential of the manure declined rapidly to values below -200 mV. These changes do not seem to be reflected in changing rates of bacterial destruction. The observed order of destruction makes it possible to predict storage conditions (temperature and time) that will lead to a predetermined level of reduction of the two pathogens.     

Airborne and indigenous microbiomes co-drive the rebound of antibiotic resistome during compost storage

Composting is widely used to reduce the abundance of antibiotic resistance genes (ARGs) in solid waste. While ARG dynamics have been extensively investigated during composting, the fate and abundance of residual ARGs during the storage remain unexplored. Here, we tested experimentally how ARG and mobile genetic element (MGE) abundances change during compost storage using metagenomics, quantitative PCR and direct culturing. We found that 43.8% of ARGs and 39.9% of MGEs quickly recovered already during the first week of storage. This rebound effect was mainly driven by the regrowth of indigenous, antibiotic-resistant bacteria that survived the composting. Bacterial transmission from the surrounding air had a much smaller effect, being most evident as MGE rebound during the later stages of storage. While hyperthermophilic composting was more efficient at reducing the relative abundance of ARGs and MGEs, relatively greater ARG rebound was observed during the storage of hyperthermophilic compost, exceeding the initial levels of untreated sewage sludge. Our study reveals that residual ARGs and MGEs left in the treated compost can quickly rebound during the storage via airborne introduction and regrowth of surviving bacteria, highlighting the need to develop better storage strategies to prevent the rebound of ARGs and MGEs after composting.     

Composting of fibrous solids from cow manure and anaerobically digested manure

Fibrous solids mechanically separated from fresh cow manure (CMFM), thermophilically digested cow manure (TFM) and two-stage digested cow manure (TSFM) were composted for 7 weeks. The Volatile Solids content was reduced by 52%, 49% and 35% for CMFM, TFM and TSFM, respectively.The weekly Volatile Solids mass balance showed a temperature sensitivity above 60°C. Crude fiber analysis illustrated the initial differences between the materials and depicted the breakdown of the organic matter during composting. The matured materials were rich in lignin and ash relative to cellulose and hemicellulose concentrations. The end-product is intended for use as substitute growth media in plant nurseries.     

Modelling the change in soil organic C and N and the mineralization of N from soil in response to applications of slurry manure

A computer simulation model of the turnover of organic matter in soil was adapted to simulate the change in soil organic C and N contents of soil during several years following annual additions of farm slurry to maize fields. The model proved successful in estimating the build-up of both C and N in soil and the leaching of N to ground-water in response to applications of slurry ranging from 50 to 300 tons per hectare per year. The model was then used to estimate the build-up of organic matter in soil under crops of fodder maize that were grown using the excess of manure produced during the last 20 years in the Netherlands. The build-up of organic matter from these applications was estimated to lead to about 70 kg extra nitrogen mineralized ha^-1 yr^-1. As a result of legislation manure applications have decreased and are expected to decrease further in the immediate future. Calculations suggest that after 10 years of manure applied at rates no longer exceeding the amount needed to replace the phosphorus removed by crops, the extra mineralization of N will still be between 45 and 60 kg ha^-1 yr^-1. If manure applications cease altogether then the extra mineralization will be about 25–30 kg N ha^-1 yr^-1.     

鸡粪有机肥对设施菜地土壤重金属和微生物群落结构的影响

通过田间试验,研究在设施菜地上施用不同剂量的鸡粪有机肥对土壤-植物系统中重金属的累积、重金属有效性和土壤微生物群落结构的影响,进一步探讨土壤微生物群落结构与土壤重金属之间的相关关系。结果表明,与对照相比,施用有机肥可提高小白菜地上部生物量,其中施肥量为60 t/hm²时值最大,增幅为59.92%;小白菜地上部Cd、Cr、Cu、Zn和As含量均大幅增加,但Pb含量无明显变化。土壤重金属Cd、Cr、Cu、Zn和As的全量均随鸡粪有机肥施加量的增加而增大,最高增幅分别为21.30%、21.58%、17.40%、19.40%和17.43%,出现明显的累积现象;施用有机肥均增加了土壤Cd、Cr、Cu、Zn和As的有效态含量,而Pb的全量和有效态含量无显著变化;除重金属Pb外,不同重金属元素全量与有效态含量均显著正相关,其中元素Zn的全量与有效态含量相关性最强。磷脂脂肪酸（PLFA）分析结果表明,土壤中含量较高的PLFA为16：0、18：1ω7c、10Me16：0和18：1ω9c,土壤微生物总PLFA和各类群PLFA含量均呈现M0.5 > M1 > CK > M2 > M4;相关性分析结果表明,土壤Cu、As全量和Cd、Cr、Cu、As有效态含量与微生物总PLFA和各类群PLFA含量均呈现显著负相关关系,其中有效态Cr和Cu含量对微生物群落结构的影响最为显著。     

大气和土壤对蔬菜汞的贡献

通过田间观测和盆栽试验 ,研究了蔬菜富集Hg的特性及土壤、大气对蔬菜Hg的贡献 .对田间 11种蔬菜的研究发现 ,蔬菜根和叶的含Hg浓度高于茎和果 ;在自然条件下 ,蔬菜所吸收的Hg 6 0 %以上分布于地上部的可食部分 .盆栽试验结果表明 ,在气Hg浓度为 5 7 6± 14 7ng·m-3 条件下 ,红萝卜、莴苣叶 (可食部分 )的含Hg浓度超过了食品卫生标准 ;气Hg、土壤Hg对蔬菜Hg的贡献率分别为 70 4 %～ 90 7%和9 3%～ 2 9 6 % ,气Hg较土壤Hg是蔬菜更为重要的Hg源     

Fate of Escherichia coli O157:H7 and Salmonella from contaminated manure slurry applied to soil surrounding tall fescue

Aim:  To investigate the potential transfer of Escherichia coli O157:H7 and Salmonella from contaminated manure slurry into the tissue of tall fescue plants.
Methods and Results:  Tall fescue plants ( n  =   50) were fertilized with a manure slurry inoculated with E. coli O157:H7 and Salmonella . Soil was collected and tall fescue plants ( n  =   10 per day) harvested on day 1, 2, 4, 8, and 14 after manure slurry fertilization. Soil samples were positive for E. coli O157:H7 on all days and on day 1, 2, 8, and 14 for Salmonella . None of the plant tissue samples were positive for E. coli O157:H7 on day 1 or 2; however, 20%, 30% and 40% of plant tissue samples were positive for E. coli O157:H7 on day 4, 8, and 14, respectively.
Conclusions:  It may be possible that E. coli O157:H7 can become transmitted and internalized into tall fescue plant tissue within 4 days after exposure to an E. coli O157:H7-contaminated manure slurry. Salmonella did not appear to be transferred to tall fescue plant tissue.
Significance and Impact of the Study:  Faeces contaminated with E. coli O157:11H7 may be one means by which grazing ruminants spread bacterial pathogens to additional animals.     

施用牛粪和绿肥对土地整治区玉米产量和土壤理化性质的影响

采用定位试验,研究了施用新鲜牛粪(15000和75000 kg·hm^-2)和绿肥(36000 kg·hm^-2)对玉米产量、土壤呼吸和土壤化学、物理性状的影响.结果表明: 与单施化肥相比,土地整治区施用牛粪的玉米籽粒增产7.2%～29.9%,千粒重增加2.5%～18.2%,活性有机碳和有机质含量分别增加5.3%～34.6%和8.0%～17.6%.施用绿肥的玉米籽粒增产10.8%～15.6%,千粒重增加4.5%～8.4%,活性有机碳含量增加14.1%～48.6%,在第二年土壤有机质含量增加了7.2%.施用牛粪和绿肥的土壤呼吸速率增加了20.0%～69.3%.施用牛粪和绿肥增加了土壤容重,减少了总孔隙度和毛管孔隙度,分别增加了＜0.01 mm和0.05～1 mm粒径团聚体的比例.连续2年在土地整治区施用牛粪和绿肥不仅能够增加玉米籽粒产量,而且已经对土壤物理化学性质的改善表现出积极的作用.     

Optimization of biogas production from co-digestion of whey and cow manure

Anaerobic co-digestion is effective and environmentally attractive technology for energy recovery from organic waste. Organic, agricultural and industrial wastes are good substrates for anaerobic co-digestion because they contain high levels of easily biodegradable materials. In this paper enhancement of biogas production from codigestion of whey and cow manure was investigated in a series of batch experiments. The influence of whey ratio on specific biogas production in a mixture with cow manure was analyzed at 35 and 55°C, for different initial pH values and for different concentrations of supplemental bicarbonate in experiments carried out over 12 days. Good biogas production (6.6 dm³/dm³), methane content (79.4%) in a biogas mixture and removal efficiencies for total solids (16%) were achieved at optimum process conditions (temperature of 55°C, 10% v/v of whey and 5 g/dm³ NaHCO₃ in the initial mixture). In order to validate optimized conditions for co-digestion of whey and cow manure in the one-stage batch process, the experiments were performed within 45 days. The high biogas production (21.8 dm³/dm³), a good methane content (78.7%) in a biogas mixture as well as maximum removal efficiencies for total solids (32.3%), and chemical oxygen demand (56.3%), respectively indicate that whey could be efficiently degraded to biogas in a onestage batch process when co-digested with cow manure.     

秸秆与牛粪混合发酵对秸秆降解及土壤肥力的影响

利用GET技术可以有效地降解秸秆生产清洁能源生物甲烷,达到无害化处理与利用秸秆的目的。本研究应用GET技术研究了发酵基质(秸秆∶牛粪)配比和温度对秸秆降解及土壤肥力的影响,以求为GET技术的推广与应用提供支撑。结果表明,各处理因素中发酵基质配比和温度及其相互作用对秸秆纤维素和半纤维素的降解有显著影响,两因数的交互作用对纤维素和半纤维素的降解也有显著作用,但对木质素的影响不显著。其中发酵基质配比以1∶1最为适宜,其纤维素和半纤维素的降解率分别为55. 39%和27. 75%;秸秆纤维素的降解率随着温度的升高而增加,但半纤维素降解率在30℃时达到最高,分别比10℃、20℃和40℃时高33. 80%、18. 37%和6. 26%。发酵基质配比和温度对厌氧发酵后土壤的肥力也有显著作用,土壤有机质、全氮和全磷含量均以1∶1配比处理和30℃处理条件下为最高。GET技术的应用还能显著改善土壤结构,厌氧发酵后土壤微团聚体粒径组成由小团聚体转化为大团聚体为主,土壤微团聚体分形维数显著下降。     

Diversity and abundance of resistome in rhizosphere soil

Science China Life Sciences -     

Aerobic heterotrophic bacteria and petroleum-utilizing bacteria from cow dung and poultry manure

In this study, enumeration and identification of total aerobic heterotrophic bacteria and petroleum-utilizing bacteria as well as the degradative potential of petroleum-utilizing bacterial isolates were carried out. The average counts of total aerobic heterotrophic bacteria in cow dung and poultry manure were 74.25 × 10⁵ c.f.u. g⁻¹ and 138.75 × 10⁵ c.f.u. g⁻¹ respectively. Acinetobacter sp, Bacillus sp, Pseudomonas sp, and Serratia spp. occurred as aerobic heterotrophs in both cow dung and poultry manure. However, Alcaligenes spp. occurred only in cow dung while, Flavobacterium sp, Klebsiella sp, Micrococcus sp, and Nocardia spp. occurred only in poultry manure as aerobic heterotrophs. The average counts of petroleum-utilizing bacteria in cow dung and poultry manure were 9.25 × 10⁵ c.f.u. g⁻¹ and 17.25 × 10⁵ c.f.u. g⁻¹ respectively. Pseudomonas spp. occurred as petroleum utilizer in both cow dung and poultry manure. However, Bacillus spp. occurred only in cow dung while Acinetobacter spp. and Micrococcus spp. occurred only in poultry manure as petroleum utilizers. Relative abundance of petroleum utilizers in total aerobic heterotrophs ranged from 6.38% to 20.00% for cow dung and from 9.38% to 17.29% for poultry manure. Introduction of pure cultures of petroleum-utilizing bacteria from cow dung and poultry manure into sterile oil-polluted soil revealed oil degradation in one week period.     

蝇蛆肠道微生物菌群对猪粪残留抗生素的降解及抗性基因的影响

【目的】过度使用抗生素作为动物饲料添加剂,导致畜禽粪便已成为抗生素抗性基因的主要蓄积库,为了研究蝇蛆(Musca domestica)对猪粪中残留抗生素及抗性基因的影响,本文动态采集了实际农场条件下蝇蛆转化过程中猪粪堆体及虫体样本。【方法】利用q PCR、液相色谱-电喷雾质谱、同位素内标法、Illumina高通量测序以及局部相似性研究蝇蛆生物转化过程中残留抗生素降解效能及相关抗性基因组变化的微生物生态机制。【结果】6 d周期内,猪粪中四环素、土霉素、金霉素、强力霉素、磺胺嘧啶、诺氟沙星、氧氟沙星、环丙沙星以及恩诺沙星等9种残留抗生素含量显著下降,累积减量为34.3%–58.1%,每日减量百分比介于7.8%–57.4%之间。猪粪中共检测到的158种抗性基因,其中有118种大幅衰减,衰减量平均达79.3%;23种抗性基因存在富集现象,富集倍数平均为3.48。在蝇蛆肠道的作用下,粪源微生物群落中Bacteroidetes相对丰度下降,Proteobacteria相对丰度增加,尤其是Ignatzschineria增幅最大。网络分析发现,抗性基因的增减与微生物群落的变化显著相关,与抗性基因衰减相关的微生物主要属于Clostridiales和Bacteroidales,而与抗性基因富集相关的微生物主要为Alcaligenaceae、[Weeksellaceae]及Bacillales。【结论】蝇蛆可有效削减猪粪中的残留抗生素及防控抗性基因向环境扩散。     

Effect of fermentation temperature on hydrogen production from cow waste slurry by using anaerobic microflora within the slurry

We examined hydrogen production from a dairy cow waste slurry (13.4 g of volatile solids per liter) by batch cultures in a temperature range from 37 to 85°C, using microflora naturally present within the slurry. Without the addition of seed bacteria, hydrogen was produced by simply incubating the slurry, using the microflora within the slurry. Interestingly, two peaks of fermentation temperatures for hydrogen production from the slurry were observed at 60 and 75°C (392 and 248 ml H₂ per liter of slurry, respectively). After the termination of the hydrogen evolution, the microflora cultured at 60°C displayed hydrogen-consuming activity, but hydrogen-consuming activity of the microflora cultured at 75°C was not detected, at least for 24 days. At both 60 and 75°C, the main by-product was acetate, and the optimum pH of the slurry for hydrogen production was around neutral. Bacteria related to hydrogen-producing moderate and extreme thermophiles, Clostridium thermocellum and Caldanaerobacter subterraneus, were detected in the slurries cultured at 60 and 75°C, respectively, by denaturing gradient gel electrophoresis analyses, using the V3 region of 16S rDNA.     

Comparative role of animal manure and vegetable waste induced compost for polluted soil restoration and maize growth

Soil amendment with two types of composts: animal manure (AC) and vegetable waste (VC) induced composts have potential to alleviate Cd toxicity to maize in contaminated soil. Therefore, Cd mobility in waste water irrigated soil can be addressed through eco-friendly and cost effective organic soil amendments AC and VC that eventually reduces its translocation from polluted soil to maize plant tissues. The comparative effectiveness of AC and VC at 3% rate were evaluated on Cd solubility, its accumulation in maize tissues, translocation from root to shoot, chlorophyll contents, plant biomass, yield and soil properties (pH, NPK, OM). Results revealed that the addition of organic soil amendments significantly minimized Cd mobility and leachability in soil by 58.6% and 47%, respectively in VC-amended soil over control. While, the reduction was observed by 61.7% and 57%, respectively when AC was added at 3% over control. Comparing the control soil, Cd uptake effectively reduced via plants shoots and roots by 50%, 46% respectively when VC was added in polluted soil. However, Cd uptake was decreased in maize shoot and roots by 58% and 52.4% in AC amended soil at 3% rate, respectively. Additionally, NPK contents were significantly improved in polluted soil as well as in plant tissues in both composts amended soil Comparative to control, the addition of composts significantly improved the maize dry biomass and chlorophyll contents at 3% rate. Thus, present study confirmed that the addition of animal manure derived compost (AC) at 3% rate performed well and might be consider the suitable approach relative to vegetable compost for maize growth in polluted soil.