Host-dependent genetic variation in freshwater pearl mussel (Margaritifera margaritifera L.)

Freshwater fishes are vulnerable to changes in water quality, physical habitat and connectivity resulting from drought, particularly in regulated rivers. When adequate river flows return, the recovery of populations might depend on the duration and consequences of drought. Rivers of the highly regulated Murray–Darling Basin in south-eastern Australia terminate at two large, shallow lakes that are separated from the estuary by tidal barrages. Over-abstraction of water and widespread prolonged drought (1997–2010) placed the lakes under severe environmental stress, culminating in critical water level recession from 2007 to 2010. Concurrently, most freshwater fish populations collapsed. We investigate shifts in fish assemblages resulting from habitat inundation in the lakes following the drought. The inundation and re-connection of the lakes and fringing habitats led to a substantial reduction of salinity throughout the region, and aquatic vegetation shifted from salt-tolerant to freshwater species. Fish assemblages became increasingly characterized by common freshwater taxa (ecological generalists), including high proportions of alien species. There were no indications of population recovery for three threatened species. The findings emphasize that short-lived fishes with specialized habitat requirements are vulnerable to severe population declines during prolonged drought in regulated rivers, which might restrict their recovery when adequate flows return.     

Interpopulation variation in reproductive traits of anadromous female brown trout, Salmo trutta L.

We studied reproductive traits in nine anadromous brown trout, Salmo trutta L., populations in seven Norwegian rivers. Within populations we found a positive significant correlation between fish length and fecundity in all populations, and between fish length and egg diameter in five populations. There were significant differences in these relationships between populations from different rivers, and between populations from different locations within rivers. When adjusted for variation in fish length, mean fecundity and mean egg diameter showed a negative significant correlation among populations. The ratio of gonadal weight to somatic weight (gonadosomatic index) varied significantly among populations but was not associated with variation in fish length. Comparatively few large eggs were found in brown trout populations co-existing with several other fish species.     

Recruitment variability of resident brown trout in peripheral populations from southern Europe

1. Population regulation was studied for seven consecutive years (1992–98) in five rivers at the periphery of the distribution of Salmo trutta, where the fish were living under environmental constraints quite different from those of the main distribution area. 2. Recruitment is naturally highly variable and the populations had been earlier classified as overexploited. Thus we expected that densities of young trout in most populations would be too low for density‐dependent mortality to operate. We tested this by fitting the abundance of recruits to egg densities over seven consecutive years (stock–recruitment relationship), and used the results to judge whether exploitation should be restricted in the interests of conserving the populations. 3. The density of 0+ trout in early September, as well as the initial density of eggs and parents, varied greatly among localities and years. The data for all populations fitted the Ricker stock–recruitment model. The proportion of variance explained by the population curves varied between 32% and 51%. However, in most cases the observations were in the density‐independent part of the stock–recruitment curve, where densities of the recruits increased proportionally with egg densities. 4. Our findings suggest that recruitment densities in most rivers and years were below the carrying capacity of the habitats. Although density‐dependent mechanisms seemed to regulate fish abundance in some cases, environmental factors and harvesting appeared generally to preclude populations from reaching densities high enough for negative feedbacks to operate. The findings thus lend support to Haldane’s (1956) second hypothesis that changes in population density are primarily due to density‐independent factors in unfavourable areas and areas with low density due to exploitation. Exploitation should be reduced to allow natural selection to operate more effectively.     

The monitoring of biological effects: the separation of natural changes from those induced by pollution.

An added mortality rate of eggs, larvae and juveniles of fish populations, or impact, is assumed to be density independent. The total mortality from hatching to recruitment is represented by the fecundity, and any increment in density independent mortality implies a decrement in density dependent mortality. At high stock the condequence is an increase in stock towards a position of less resilience: at low stock less resilience is found with a decrease in stock. In general impact generates a shift of K-strategy, the self-stabilizing strategy, to r-strategy, and opportunistic one. In a fish population very little impact should be tolerated at low stock because it would prevent recovery to a management objective such as maximum sustainable yield. At high stock, impact may generate more stock at an unknown risk.     

The influence of maternal length and age on the size and weight of the eggs and the relative fecundity of the haddock, Melanogrammus aeglefinus, in British waters

The diameter and dry weight of the eggs of haddock, Melanogrammus aeglefinus , are positively correlated with fish length. The correlations are largely due to the fact that many of the smaller fish that were sampled were 2 years old, and the eggs of these young haddock, which can be regarded as precocious spawners, are significantly smaller and lighter than those of older fish. The relative fecundity of 2–year–old haddock (274 eggs g⁻¹) is also lower than that of the other age classes (493 eggs g⁻¹); this has important implications for the estimation of egg production from female spawning stock biomass. It is pointed out that in some years precocious spawners represent a large component of the North Sea haddock spawning stock. When the annual egg production of this stock is calculated, it may be appropriate to apply a weighting factor to the number of eggs contributed by the 2–year–olds, on the assumption that the small eggs of these fish produce larvae that are less viable than those of older haddock.     

The Macquarie perch,Macquria australasica (Pisces: Percichthyidae), of Lake Eildon,Victoria

The results of a field study carried out between 1966 and 1969 indicate that the spawning migrations of Macquarie perch, Macquaria australasica, from Lake Eildon, Victoria, into the inflowing Delatite, Howqua, Jamieson, Goulburn and Big Rivers occurred when water temperatures in the rivers reached 16.5°C. Because of different temperature regimes the times of the spawning migration and spawning differed from river to river. Migrating fish were of a uniform size and were in their fifth to tenth years of life. Recaptures of tagged fish suggest that some fish use the same river each year for spawning. Observations on pre-spawning and spawning behaviour and on the characteristics of the spawning site are recorded. Fecundity of fourteen fish in the size range 305–405 mm standard length varied from 50189 to 107 724 eggs per fish. The virtual disappearance of Macquarie pereh from Lake Eildon was probably caused by a combination of several factors, including changed habitat, overfishing of the spawning stock and predation by, and competition for food with, introduced fish.     

Failure of a stocking policy, of hatchery reared brown trout, Salmo trutta L., in Asturias, Spain, detected using LDH-5* as a genetic marker

A useful genetic marker exists through the apparent fixation of the LDH-5 * 100 allele in wild populations of brown trout in rivers from Asturias, Spain, contrasted with the near fixation of the LDH-5 * 90 allele in hatchery populations used to stock these rivers. In sampling locations where natural reproduction occurred, the * 100 allele was found exclusively in all areas having no record of hatchery stocking. The * 100 allele also predominated in three stocked areas having natural reproduction; in two of these areas a few individuals of the 0 + age class were homozygous for the * 90 allele. These data indicated that all catchable and reproductive fish originated from indigenous populations and thus the policy of hatchery supplementation was a failure in these areas.     

The times are changing: temporal shifts in patterns of fish invasions in central European fresh waters

This study examines the invasion history of alien fish species based on exhaustive national data sets on fish invasions of two contiguous central European countries (Germany and Austria). Fifteen alien fish species are currently established in both countries, constituting 14 and 17% of the total freshwater fish fauna of Germany and Austria, respectively. In both countries, six alien species are present, but not established. The status of five alien species in Germany and three species in Austria remains unknown. Accumulation rates of alien fish species have increased in recent decades with >50% of them reported after 1971. North America and Asia were the primary sources of alien fish species in Germany and Austria up to the 1980s, whereas European species of Ponto‐Caspian origin dominate now. Fisheries (including aquaculture) and the animal trade were responsible for most earlier introductions, whereas waterways were the main pathway for recent invaders. The extent of the spatial distribution of alien species was positively correlated with residence time, i.e. the time elapsed since the first national record. Different thermal preferences of early invaders (mostly coldwater species) and new invaders (typically warmwater adapted) may benefit the latter in the face of climate change. It is concluded that new challenges for alien fish management arise and that ecosystem‐based approaches as endorsed by the E.U. Water Framework Directive (maintaining or restoring good ecological status of rivers and streams) should become the centrepiece of river management in Europe.     

Are alien fish a reliable indicator of river health?

1. The ability of many introduced fish species to thrive in degraded aquatic habitats and their potential to impact on aquatic ecosystem structure and function suggest that introduced fish may represent both a symptom and a cause of decline in river health and the integrity of native aquatic communities. 2. The varying sensitivities of many commonly introduced fish species to degraded stream conditions, the mechanism and reason for their introduction and the differential susceptibility of local stream habitats to invasion because of the environmental and biological characteristics of the receiving water body, are all confounding factors that may obscure the interpretation of patterns of introduced fish species distribution and abundance and therefore their reliability as indicators of river health. 3. In the present study, we address the question of whether alien fish (i.e. those species introduced from other countries) are a reliable indicator of the health of streams and rivers in south‐eastern Queensland, Australia. We examine the relationships of alien fish species distributions and indices of abundance and biomass with the natural environmental features, the biotic characteristics of the local native fish assemblages and indicators of anthropogenic disturbance at a large number of sites subject to varying sources and intensities of human impact. 4. Alien fish species were found to be widespread and often abundant in south‐eastern Queensland rivers and streams, and the five species collected were considered to be relatively tolerant to river degradation, making them good candidate indicators of river health. Variation in alien species indices was unrelated to the size of the study sites, the sampling effort expended or natural environmental gradients. The biological resistance of the native fish fauna was not concluded to be an important factor mediating invasion success by alien species. Variation in alien fish indices was, however, strongly related to indicators of disturbance intensity describing local in‐stream habitat and riparian degradation, water quality and surrounding land use, particularly the amount of urban development in the catchment. 5. Potential confounding factors that may influence the likelihood of introduction and successful establishment of an alien species and the implications of these factors for river bioassessment are discussed. We conclude that the potentially strong impact that many alien fish species can have on the biological integrity of natural aquatic ecosystems, together with their potential to be used as an initial basis to find out other forms of human disturbance impacts, suggest that some alien species (particularly species from the family Poeciliidae) can represent a reliable ‘first cut’ indicator of river health.     

FRESHWATER FISH OF THE ADDO ELEPHANT NATIONAL PARK

Summary

This study aimed to determine the distribution and relative abundance of freshwater fish in the Addo Elephant National Park. A total of 1578 fish specimens of 12 species were collected during surveys carried out in the Sundays River and four tributaries during 1996 and 1997. The redfin minnow Pseudobarbus afer comprised 81.6% of the total catch. Length frequency analysis of P. afer populations indicated recent successful recruitment in several rivers. Differences between rivers in the concentrations of dissolved and suspended solids and pH are possible reasons for different species complements. These surveys show the distribution of P. afer and Barbus aeneus in the Eastern Cape Province to be wider than previously reported. Management action is required to minimise opportunities for further establishment and spread of alien and translocated fish species and to conserve indigenous fish assemblages within the Park.     

广东省主要水系外来水生动物初步调查

【背景】广东省是我国遭受外来生物入侵最严重的地区之一,许多外来水生动物在广东省的河流均有分布,但有关其具体分布和数量缺乏系统研究。【方法】通过野外调查的方式对广东省鉴江、韩江、潭江、西江、北江、东江等水系的外来水生动物的分布和数量进行了初步调查,并对调查到的外来水生动物的生态学特征和入侵机制进行了初步研究。【结果】共调查到13种外来水生动物,包括巴西龟、尼罗罗非鱼、莫桑比克罗非鱼、奥利亚罗非鱼、下口鲶、革胡子鲶、食蚊鱼、麦瑞加拉鲮、露斯塔野鲮、斑点叉尾鮰、大口黑鲈等11种脊椎动物和福寿螺、克氏原螯虾2种无脊椎动物;其中以福寿螺、巴西龟和3种罗非鱼的分布最为广泛。【结论与意义】几种外来水生生物主要通过水产养殖、观赏渔业和生物防治引种入侵;典型的"R"策略者、对环境具有较强耐受力的生物、杂食性鱼类更容易成功入侵。     

Genetic stock identification of Atlantic salmon (Salmo salar) populations in the southern part of the European range

Background

Anadromous migratory fish species such as Atlantic salmon (Salmo salar) have significant economic, cultural and ecological importance, but present a complex case for management and conservation due to the range of their migration. Atlantic salmon exist in rivers across the North Atlantic, returning to their river of birth with a high degree of accuracy; however, despite continuing efforts and improvements in in-river conservation, they are in steep decline across their range. Salmon from rivers across Europe migrate along similar routes, where they have, historically, been subject to commercial netting. This mixed stock exploitation has the potential to devastate weak and declining populations where they are exploited indiscriminately. Despite various tagging and marking studies, the effect of marine exploitation and the marine element of the salmon lifecycle in general, remain the "black-box" of salmon management. In a number of Pacific salmonid species and in several regions within the range of the Atlantic salmon, genetic stock identification and mixed stock analysis have been used successfully to quantify exploitation rates and identify the natal origins of fish outside their home waters - to date this has not been attempted for Atlantic salmon in the south of their European range.

Results

To facilitate mixed stock analysis (MSA) of Atlantic salmon, we have produced a baseline of genetic data for salmon populations originating from the largest rivers from Spain to northern Scotland, a region in which declines have been particularly marked. Using 12 microsatellites, 3,730 individual fish from 57 river catchments have been genotyped. Detailed patterns of population genetic diversity of Atlantic salmon at a sub-continent-wide level have been evaluated, demonstrating the existence of regional genetic signatures. Critically, these appear to be independent of more commonly recognised terrestrial biogeographical and political boundaries, allowing reporting regions to be defined. The implications of these results on the accuracy of MSA are evaluated and indicate that the success of MSA is not uniform across the range studied; our findings indicate large differences in the relative accuracy of stock composition estimates and MSA apportioning across the geographical range of the study, with a much higher degree of accuracy achieved when assigning and apportioning to populations in the south of the area studied. This result probably reflects the more genetically distinct nature of populations in the database from Spain, northwest France and southern England. Genetic stock identification has been undertaken and validation of the baseline microsatellite dataset with rod-and-line and estuary net fisheries of known origin has produced realistic estimates of stock composition at a regional scale.

Conclusions

This southern European database and supporting phylogeographic and mixed-stock analyses of net samples provide a unique tool for Atlantic salmon research and management, in both their natal rivers and the marine environment. However, the success of MSA is not uniform across the area studied, with large differences in the relative accuracy of stock composition estimates and MSA apportioning, with a much higher degree of accuracy achieved when assigning and apportioning to populations in the south of the region. More broadly, this study provides a basis for long-term salmon management across the region and confirms the value of this genetic approach for fisheries management of anadromous species.     

Comparison of phospholipid and fatty acid composition of wild and cultured striped bass eggs

The dominant fatty acids in all neutral lipid fractions of non-water hardened eggs from two wild and one cultured stock of striped bass Morone saxatilis were the monoenes, 18 : 1n9/n7>16 : 1n7>17 : 1. The dominant fatty acids in the phospholipid fraction of all eggs, regardless of origin, were 22 : 6n3>18 : 1n9/n7>20 : 5n3>16 : 1n7>16 : 0>18 : 0. Arachadonic acid (AA, 20 : 4n6) was significantly lower (2·0%) in cultured fish eggs compared to either wild stock (5·8–6·1%). Fatty acids from the liver and eggs of wild Shubenacadie fish were similar to one another with respect to both neutral and phospholipid fractions. However, the AA and eicosapentaenoic acid (EPA, 20 : 5n3) content of the phospholipid fraction varied according to the hypothesized migration behaviour of Shubenacadie fish. The total lipid content of wild fish eggs was significantly greater than that of cultured fish. The total phospholipid content of Shubenacadie eggs was significantly higher than either Roanoke or cultured fish eggs. Phosphotidylinositol (PI) was the dominant phospholipid found ins all egg samples from all origins as opposed to phosphotidylcholine, which is usually the dominant phospholipid. These data indicate that PI and AA may have important and as yet unidentified roles in fertilization and embryonic development in these fish.     

Reproductive biology of anadromous arctic char,Salvelinus alpinus (L.)? in the Cumberland Sound area of Baffin Island

The ovaries of anadromous arctic char, Salvelinus alpinus (L.), captured during 1973 from four high arctic rivers on Baffin Island started to increase in weight early in July and were at their heaviest in mid-September just before spawning. At this time, 40 cm (615 g) char from two rivers contained ovaries weighing 17.0 g (dry) which differed significantly from the 22.5 g gonads of comparable char from the other two areas. Gonadal development in male fish began in June and the diameter of testes at full maturity (3.0–4.0 cm) was similar regardless of river system. Fecundity of comparable fish varied significantly among the rivers with char 40 cm in length containing 1400–2400 eggs while the corresponding values for 60 cm (i.e. 2050 g) char ranged from 4000–5500. The diameter of both immature and mature eggs was similar regardless of system. Values for immature eggs averaged 0.64 mm in 40 cm fish and 1.60 mm in 60 cm specimens. Diameter of mature eggs, on the other hand, was considerably greater (3.2 and 4.3 mm, respectively). Maturity was first reached at age 10 (i.e. 35 cm) in both males and females and maturing fish of both sexes were not always restricted to fresh water. Redd construction occurred at a depth of one to at least 11 m at a temperature of 0.5–4.0° C. The percentage of eggs retained in the body cavity after spawning varied from 0.22–1.50 and the mortality rate of spawned eggs was extremely low.     

Index rivers: a key to managing anadromous fish

Summary A network of index rivers provides information for the management of anadromous fish stocks in the Gulf of St Lawrence. Index rivers are sites where regular observations are made of fish abundance and characteristics. This information is used particularly for Atlantic salmon to estimate stock abundance, to evaluate spawning requirements and to forecast returns. The need for timely and unbiased indicators of stock abundance is increasing. A network of index rivers would fulfil this need.     

Using whole body elemental fingerprint analysis to distinguish different populations of Coilia nasus in a large river basin

Coilia nasus is widely distributed along the coast, and rivers and lakes that connect with the ocean in China. It is a diadromous fish but has residential populations in the middle and lower reach of the Yangtze River and its associated lakes such as Lake Taihu. These ecologically differentiated diadromous and residential populations are difficult to identify and separate, even with current molecular screening methods such as applying the mtDNA markers. The objective of the present study was to screen these populations by the means of the whole body elemental fingerprint analysis (EFA). Our results showed that the diadromous population had significantly lower concentrations of Al, B, Ca, Cr, Fe, K, Mg, Mn, P, S, and Zn, and significantly higher As than the residential populations. The spawners had lower concentrations of B, Cr, P, and S before laying eggs than after laying eggs. Advanced statistical models detected distinct spatial patterns between the diadromous and residential populations, and between groups before and after spawning. The current study showed that the whole body EFA can clearly distinguish C. nasus populations in the Yangtze River Basin and thus proved to be useful and may substitute the elemental fingerprint of fish otolith in future fish ecological studies that need to identify different populations.     

基于环境DNA宏条形码技术的北京地区鱼类多样性调查和外来鱼种入侵风险评估

[目的]调查北京地区鱼类多样性和群落分布及评估外来鱼种的入侵风险.[方法]选取北京地区水库、湖泊和河流3种水体类型共33个采样点,于2020年6月10—17日开展水生态监测,利用环境DNA宏条形码技术对各样点的鱼类多样性和群落结构进行监测和分析,对目前北京地区水生态系统中本地鱼种和外来鱼种进行分类汇总,并评估典型外来入...     

Genetic changes in an Atlantic salmon population resulting from escaped juvenile farm salmon

The study was undertaken on three adjacent rivers in NW Ireland, on one of which an Atlantic salmon Salmo salar freshwater juvenile rearing unit is situated. Two markers which distinguished farm and wild populations were used. An Ava II-B RFLP in the ND1 region of mtDNA was at a frequency of 0.58 in the farm strain but absent in the wild populations. Allele E at minisatellite locus Ssa- A45/2/l was at a frequency of 0.91 in farm samples, but at a maximum of 0.41 in the populations in the two rivers adjacent to the one with the juvenile rearing unit. The farm strain showed a significant reduction in mean heterozygosity (0.281 ± 0.057), over three minisatellite loci examined, compared to wild samples (0.532 ± 0.063). The occurrence of farm genotypes and the independent occurrence of mtDNA and minisatellite markers in several parr samples from the river indicated that escaped juvenile salmon completed their life cycle, bred and interbred with native fish, upon their return to the river. Escaped fish homed accurately, as adults, to the site of escape, i.e. the area adjacent to the hatchery outflow in the upstream part of the river. Breeding of males in the lower part of the river was also indicated but this could have been due to mature male parr which had moved downstream. The return of adults of farm origin to the river to breed was indicated by the presence of the Ava II-B haplotype in adults netted in the estuary.     

Historical geography of pearl harvesting and current status of populations of freshwater pearl mussel Margaritifera margaritifera (L.) in the western part of Northern European Russia

This paper summarises data on the occurrence of freshwater pearl mussel Margaritifera margaritifera in the western part of Northern European Russia adjacent to White Sea, Barents Sea, Onega Lake and Ladoga Lake basins. Also, this article provides an overview of the literature-based data and archive materials on the history of pearl harvesting. We include a list of rivers of Northwestern Russia, where pearls were harvested during the period of the sixteenth to twentieth centuries. The pearl mussel populations at the present time exist in at least 24 water streams in Northwestern Russia. Many of these populations are in high abundance and are able to reproduce normally. Data on the status of populations are given in this paper. Data indicate that the pearl mussel population in Russia contains >143.5 million individuals, but this estimation is certainly undervalued. Timber floating (timber floating is the transport of timber on waterways), hydro-engineering construction, pollution of rivers by industrial wastes and introduction of alien species, as well as a reduction in host fish species numbers can all be cited as the main factors that transformed the ecosystems inhabited by pearl mussel of Northern Russia. In addition, methods used in the Russian Federation for decreasing the anthropogenic load on pearl mussel populations were considered.     

Stocking may increase mitochondrial DNA diversity but fails to halt the decline of endangered Atlantic salmon populations

Over the last 50 years, Spanish Atlantic salmon (Salmo salar) populations have been in decline. In order to bolster these populations, rivers were stocked with fish of northern European origin during the period 1974–1996, probably also introducing the furunculosis-inducing pathogen, Aeromonas salmonicida. Here we assess the relative importance of processes influencing mitochondrial (mt)DNA variability in these populations from 1948 to 2002. Genetic material collected over this period from four rivers in northern Spain (Cantabria) was used to detect variability at the mtDNA ND1 gene. Before stocking, a single haplotype was found at high frequency (0.980). Following stocking, haplotype diversity (h) increased in all rivers (mean h before stocking was 0.041, and 0.245 afterwards). These increases were due principally to the dramatic increase in frequency of a previously very low frequency haplotype, reported at higher frequencies in northern European populations proximate to those used to stock Cantabrian rivers. Genetic structuring increased after stocking: among-river differentiation was low before stocking (1950s/1960s Φ _ST = –0.00296–0.00284), increasing considerably at the height of stocking (1980s Φ _ST = 0.18932) and decreasing post-stocking (1990s/2002 Φ _ST = 0.04934–0.03852). Gene flow from stocked fish therefore seems to have had a substantial role in increasing mtDNA variability. Additionally, we found significant differentiation between individuals that had probably died from infectious disease and apparently healthy, angled fish, suggesting a possible role for pathogen-driven selection of mtDNA variation. Our results suggest that stocking with non-native fish may increase genetic diversity in the short term, but may not reverse population declines.