Muscodor sutura, a novel endophytic fungus with volatile antibiotic activities

Muscodor sutura is described as a novel species that is also an endophyte of Prestonia trifidi. Uniquely, this fungus produces a reddish pigment, on potato dextrose agar (PDA), when grown in the dark. In addition, the organism makes some volatile organic compounds that have not been previously reported from this genus, namely, thujopsene, chamigrene, isocaryophyllene, and butanoic acid, 2-methyl. These and other volatile compounds in the mixture possess wide-spectrum antifungal activity and no observable antibacterial activity. Most unusually, on PDA, the newly developing hyphae of this fungus grow in a perfect stitching pattern, in and out of the agar surface. The partial ITS–DNA sequence of this organism is identical to that of Muscodor vitigenus but it differs from all other Muscodor spp. Justification for a new species, as Muscodor sutura, is collectively based on morphological, cultural, chemical, and bioactivity properties.     

Muscodor albus MOW12 an Endophyte of Piper nigrum L. (Piperaceae) Collected from North East India Produces Volatile Antimicrobials

Muscodor albus MOW12, an endophytic fungus isolated from Piper nigrum in Mawlong, Meghalaya, India, resembles some cultural and hyphal characteristics of previous isolates of Muscodor sp. In addition, it possesses about 99 % similarity in its ITS rDNA with other M. albus isolates and thus is nicely centered within the genetic tree to other Muscodor spp. This xylariaceae fungus effectively inhibits and kills certain plant pathogenic fungi by virtue of a mixture of volatile compounds that it produces. The majority of these compounds were identified by gas chromatography/mass spectrometry as small molecular weight esters, alcohols, and acids. The main ester components of this isolate of M. albus in its volatile mixture are acetic acid, ethyl ester; propanoic acid, 2-methyl-, methyl ester and acetic acid, 2-methylpropyl ester. This appears to be the first report of any M. albus strain from India.     

Plant tissue localization of the endophytic insect pathogenic fungi Metarhizium and Beauveria

Endophytic fungi may display preferential tissue colonization within their plant hosts. Here we tested if the endophytic, insect pathogenic fungi (EIPF) Metarhizium and Beauveria showed preferential localization within plant tissues, in the field and under laboratory conditions. In the field, plants were sampled from three separate sites (Brock University, St. Catharines, Ontario; Pelham, Ontario; and Torngat Mountains National Park, Newfoundland, Canada) and EIPF were isolated from plant roots, the hypocotyl, and stem and leaves. Two genera of EIPF, Metarhizium spp. and Beauveria bassiana, were isolated from plants sampled, as well as the nematophagous fungus, Pochonia chlamydosporium. Metarhizium spp. were almost exclusively found in roots, whereas B. bassiana and P. chlamydosporium were found throughout the plant. The Metarhizium species were identified by RFLP and 95 % were Metarhizium robertsii, 4.3 % were M. brunneum, and 0.7 % were M. guizhouense. Lab studies with M. robertsii and B. bassiana reflected observations found in the field, that is, Metarhizium was restricted to the roots of plants while B. bassiana was found throughout the plant. Insect infection by these EIPF is preferential with respect to above and below ground insects, and the present study correlates above and below ground insect infections with endophytic colonization by these EIPF.     

白色麝香霉挥发性有机化合物的抗菌活性和组成分析

采用核糖体RNA转录间隔区(internal transcribed spacer of ribosomal RNA,ITS r RNA)、RNA聚合酶II(RNA polymerase II,rpb2)和β-维管蛋白(beta-tubulin,tub1)基因系统发育分析法,鉴定了一株分离自浙江庆元的麝香霉ZJQY709,鉴定结果表明该菌为白色麝香霉Muscodor albus。生长速率法测定结果显示该菌株最适生长温度为22–28℃。二分格培养皿对峙培养法测定该菌挥发性有机化合物的抑菌活性,结果表明其挥发性有机化合物对灰葡萄孢菌和立枯丝核菌的生长抑制作用较强,而对尖孢镰刀菌和终极腐霉的抑制作用较弱。固相微萃取/气质联用法分析该菌产生的挥发性有机化合物,结果显示其挥发性有机化合物成分复杂,主要气体成分为2-甲基丙酸、乙酸-2-甲基丙酯和1-丁醇-2-甲基乙酸。     

Bioactivity of secondary metabolites and thallus extracts from lichen fungi

Fungal secondary compounds and total extracts are known to affect growth of bacteria, fungi, and plants. This study tested the effects of purified compounds and total extracts from three lichens on the growth of two plant pathogens, Ophiostoma novo-ulmi ssp. americana and Sclerotinia sclerotiorum. Usnic acid showed no reduction in relative growth rates (RGR), whereas vulpinic acid reduced RGR for both fungi and atranorin reduced RGR of S. sclerotiorum only. However, purified vulpinic acid showed stronger effects than total extracts on fungal growth. The results suggest that these lichens show further promise as a source for bioactive compounds against fungi.     

Development of methods for detection and Agrobacterium-mediated transformation of the sterile,endophytic fungus Muscodor albus

Symbiotic endophytes, unlike plant pathogens, do not usually induce visible host response. This may constraint the researcher's decision whether a plant has been successfully infected by the endophyte. In order to properly study the establishment, development and progress of an endophyte in the host plant and host-endophyte interactions, methods for the identification and localization of endophytic microorganisms are needed. Towards this aim, we focused at two levels: (A) We constructed M. albus-specific primers for polymerase chain reaction (PCR). In vitro, these primers specifically detected only M. albus strains and not isolates of related fungi (such as Daldinia sp. and a Xylariaceae sp.). (B) For direct visualization of the fungi, we inserted a reporter gene (gfp) into M. albus hyphae using Agrobacterium-mediated transformation. Since M. albus is a sterile fungus (i.e., without spores or fungal fruiting bodies), we used chopped fungal mycelium for the transformation procedure. We transformed three different isolates of M. albus using Agrobacterium-mediated transformation. Fifty-nine different transformants were collected with a transformation efficacy of 0.0004–0.0026%. Although PCR-based detection and direct visualization of the transformants in planta were unsuccessful, all tested transformants (with one exception) exhibited similar biological activity to their cognate wild type. This work provides a significant step forward in molecular research of the relationships between this endophytic genus and their hosts.     

植物环肽及其可能的生物合成途径

植物环肽是一个庞大的小分子天然产物家族,通常由4—10个氨基酸残基组合而成。该类化合物广泛存在于全球多种植物的根、茎、枝、叶及种子中,中草药中也时有发现。由于对其生物合成途径及机理研究较少,环肽分子的利用价值尚未得到有效的开发。和常见的非环状基因编码的多肽或蛋白质相比,环肽结构更为复杂。本文将对植物环肽的生物合成途径及其机理做初步探讨。     

白木香内生真菌枝顶孢属两菌株的挥发油成分

采用溶剂萃取法提取白木香内生真菌R1(Acremonium sp.)和R2(Acremonium sp.)的挥发油, 经GC-MS联用技术进行分析, 从R1和R2的挥发油中分别鉴定出20个和16个成分, 均以油酸、亚油酸、棕榈酸等脂肪酸为主要成分, 并且均含有1,8-桉叶油素、姜烯、芳姜黄烯等萜类成分。本研究首次报道白木香内生真菌的挥发油成分。     

Correlation between pectate lyase activity and ability of diazotrophic Klebsiella oxytoca VN 13 to penetrate into plant tissues

Diazotrophic Klebsiella oxytoca VN 13 was able to lyse pectate, but the lytic activity of cultures grown on non-selective media was weak, and the enzyme was located mainly inside the cells. A small fraction of the population (10^-6 to 10^-5) was able to grow in a selective medium with sodium polygalacturonate as sole carbon source, and produced increased amounts of the pectinolytic enzyme pectate lyase. When wheat seeds were inoculated with these bacteria, increased levels of this enzyme correlated with a higher rate of internal colonization of wheat roots and with stimulation of wheat growth resulting in higher biomass. This suggests that colonization occurs via lyzed pectin layers. This revised version was published online in June 2006 with corrections to the Cover Date.     

Ganoderma carocalcareus sp. nov., with crumbly-friable context parasite to saprobe on Anthocleista nobilis and its phylogenetic relationship in G. resinaceum group

A new species Ganoderma carocalcareus (Basidiomycota, Ganodermataceae) was collected on living trunk and dead stumps of Anthocleista nobilis (Gentianaceae) in waterlogged swamps in the Mbalmayo Forest Reserve, Cameroon, and identified on the basis of morphology and phylogenetic analyses inferred from mitochondrial small subunit (mtSSU) and internal transcribed spacer (ITS1-5.8S-ITS2) rDNA sequences. Distinct phenotypic characteristics of the new species are dimorphism of basidiomata and variability in context structure and texture over developmental stages. The young basidiomata is ungulate to punk-shaped with context composed of vegetative hyphae attended by scattered, orbicular, smooth, thick-walled chlamydospores, and the mature basidiomata is cushion- to bracket-like with context entirely consisting of chlamydospores masses. This ontogeny intimates the origin of chlamydospores, for which the biogenesis correlates the vanishing of vegetative hyphae throughout the basidiomata maturation. Morphological comparison included Tomophagus colossus (=G. colossus), G. subamboinense and G. weberianum, the known Ganodermataceae species producing chlamydospores and or gasterospores in basidiomata tissues, and G. resinaceum, the closest species with regard to morphology. It followed that G. carocalcareus could not be assigned to these or any other known Ganoderma species. Analyses of mtSSU and ITS rDNA sequence data resolved G. carocalcareus in the G. resinaceum group as a distinct species, but being a close relative of both G. subamboinense and G. weberianum.     

大鲵细菌性败血症病原分离及生物学特性研究

利用湖南润孚生物工程公司大鲵人工养殖场10尾具有典型症状的患病大鲵,从体表病灶和体内器官肠、胃、肝、脾、肾等共分离得到9株细菌。通过人工感染试验、细菌形态观察和生理生化实验对其进行鉴定,结果显示引起该养殖场大鲵发病的病原为嗜水气单胞菌。通过回归感染试验发现,其中一菌株对大鲵的致病力很强,死亡率达到100%。药物敏感性试验结果显示,菌株对环丙沙星、头孢曲松、头孢他啶、头孢孟多、头孢哌酮、庆大霉素、头孢西丁药物相对比较敏感,而对克林霉素、头孢唑林、甲硝唑和复方新诺明具有耐药性。     

Effect of water activity on the production of volatile organic compounds by Muscodor albus and their effect on three pathogens in stored potato

Muscodor albus (Xylariaceae, Ascomycetes) isolate CZ-620 produces antimicrobial volatile organic?compounds (VOC), which appear to have potential for the control of various postharvest diseases. The effect of water activity (Aw) on the production of VOC by M. albus culture, and their inhibitory effects on the growth of three pathogens of potato tuber (Fusarium sambucinum, Helminthosporium solani, and Pectobacterium atrosepticum) and the development of diseases caused by the three pathogens (dry rot, silver scurf, and bacterial soft rot, respectively)?were investigated. Rye grain culture of the fungus produced six alcohols, three aldehydes, five acids or esters, and two terpenoids. The most abundant VOC were: isobutyric acid; bulnesene, a sesquiterpene; an unidentified terpene; 2 and 3-methyl-1-butanol; and ethanol. However, the level of each of those VOC varied with Aw of the culture. Emission activity?occurred mainly at Aw above 0.75 and high emission of most VOC occurred only at Aw above 0.90. The aldehydes (2-methyl-propanal and 3-methyl-butanal) were the only VOC produced in quantities below an Aw of 0.90. An Aw value of 0.96 favored maximum emission of acids, esters, and terpenoids. There was a higher production of alcohols and a decrease in aldehydes with increase in Aw. Isobutyric acid, which has been the main M.?albus VOC monitored in previous studies as an indicator of antifungal activity, had a rather narrow optimum, peaking at Aw of 0.96 and declining sharply above 0.98. Results showed that substrate Aw affects the production dynamics of each group of VOC by the fungus, and suggest that VOC production can be prolonged by maintaining M. albus culture at a constant optimum Aw. The VOC was inhibitory to F. sambucinum, H. solani, and P. atrosepticum; and biofumigation with M. albus significantly reduced dry rot and soft rot development, and completely controlled silver scurf in inoculated tubers incubated at both 8°C and 22°C. The results show that Aw of grain culture affects the production of VOC by M.?albus; and that the VOC inhibit the growth of the tested pathogens and the diseases caused by them in potato?tubers.     

Progress in pharmacogenomics and its promise for medicine

Pharmacogenomics addresses the impacts of diverse and multiple genes in populations as determinants of responses of individual patients to drugs. The field has its roots in basic science, and is pivotal in drug development, elucidation of therapeutic efficacy, and constraining the risks of adverse drug reactions. Regulatory agencies are relying increasingly on pharmacogenomics for identification of patients who are particularly likely to benefit from treatment with specific agents and exclusion of those at risk of adverse drug reactions. Practical applications of pharmacogenomics already abound particularly in the use of drugs acting on the central nervous system and on the cardiovascular system. The Society for Experimental Biology and Medicine (SEBM) is proud and pleased to have devoted its 2008 symposium, presented at the annual Experimental Biology meeting in San Diego on April 6, 2008, to advances in pharmacogenomics with emphasis on drug development, regulatory agency considerations, and clinical applications.     

Synthesis and evaluation of biological activity for dual-acting antibiotics on the basis of azithromycin and glycopeptides

One of the promising directions of the combined approach is the design of dual-acting antibiotics – heterodimeric structures on the basis of antimicrobial agents of different classes. In this study a novel series of azithromycin-glycopeptide conjugates were designed and synthesized. The structures of the obtained compounds were confirmed using NMR spectroscopy and mass spectrometry data including MS/MS analysis. All novel hybrid antibiotics were found to be either as active as azithromycin and vancomycin against Gram-positive bacterial strains or have superior activity in comparison with their parent antibiotics. One compound, eremomycin-azithromycin conjugate 16, demonstrated moderate activity against Enterococcus faecium and Enterococcus faecalis strains resistant to vancomycin, and equal to vancomycin’s activity for the treatment of mice with Staphylococcus aureus sepsis.