Beyond trophic morphology: stable isotopes reveal ubiquitous versatility in marine turtle trophic ecology

The idea that interspecific variation in trophic morphology among closely related species effectively permits resource partitioning has driven research on ecological radiation since Darwin first described variation in beak morphology among Geospiza. Marine turtles comprise an ecological radiation in which interspecific differences in trophic morphology have similarly been implicated as a pathway to ecopartition the marine realm, in both extant and extinct species. Because marine turtles are charismatic flagship species of conservation concern, their trophic ecology has been studied intensively using stable isotope analyses to gain insights into habitat use and diet, principally to inform conservation management. This legion of studies provides an unparalleled opportunity to examine ecological partitioning across numerous hierarchical levels that heretofore has not been applied to any other ecological radiation. Our contribution aims to provide a quantitative analysis of interspecific variation and a comprehensive review of intraspecific variation in trophic ecology across different hierarchical levels marshalling insights about realised trophic ecology derived from stable isotopes. We reviewed 113 stable isotope studies, mostly involving single species, and conducted a meta‐analysis of data from adults to elucidate differences in trophic ecology among species. Our study reveals a more intricate hierarchy of ecopartitioning by marine turtles than previously recognised based on trophic morphology and dietary analyses. We found strong statistical support for interspecific partitioning, as well as a continuum of intraspecific trophic sub‐specialisation in most species across several hierarchical levels. This ubiquity of trophic specialisation across many hierarchical levels exposes a far more complex view of trophic ecology and resource‐axis exploitation than suggested by species diversity alone. Not only do species segregate along many widely understood axes such as body size, macrohabitat, and trophic morphology but the general pattern revealed by isotopic studies is one of microhabitat segregation and variation in foraging behaviour within species, within populations, and among individuals. These findings are highly relevant to conservation management because they imply ecological non‐exchangeability, which introduces a new dimension beyond that of genetic stocks which drives current conservation planning. Perhaps the most remarkable finding from our data synthesis is that four of six marine turtle species forage across several trophic levels. This pattern is unlike that seen in other large marine predators, which forage at a single trophic level according to stable isotopes. This finding affirms suggestions that marine turtles are robust sentinels of ocean health and likely stabilise marine food webs. This insight has broader significance for studies of marine food webs and trophic ecology of large marine predators. Beyond insights concerning marine turtle ecology and conservation, our findings also have broader implications for the study of ecological radiations. Particularly, the unrecognised complexity of ecopartitioning beyond that predicted by trophic morphology suggests that this dominant approach in adaptive radiation research likely underestimates the degree of resource overlap and that interspecific disparities in trophic morphology may often over‐predict the degree of realised ecopartitioning. Hence, our findings suggest that stable isotopes can profitably be applied to study other ecological radiations and may reveal trophic variation beyond that reflected by trophic morphology.     

黏菌分布格局与生态学研究进展

黏菌是一类广泛分布于全球各种陆地生态系统的菌物,生态功能独特。随着物种资源调查的极大拓展以及分子标记和高通量测序技术等的成熟应用,黏菌的生态学研究在近年来取得了长足的发展。本文综述了国内外黏菌物种分布与群落生态学的研究进展,旨在为基于经典分类和分子标记研究黏菌的物种演替、群落结构和生态作用等提供重要参考和有益借鉴。     

微生物生态学理论框架

微生物是生态系统的重要组成部分,直接或间接地参与所有的生态过程。微生物生态学是基于微生物群体的科学,利用微生物群体DNA/RNA等标志物,重点研究微生物群落构建、组成演变、多样性及其与环境的关系,在生态学理论的指导和反复模型拟合下由统计分析得出具有普遍意义的结论。其研究范围从基因尺度到全球尺度。分子生物学技术的发展,使人们可以直接从基因水平上考查其多样性,从而使得对微生物空间分布格局及其成因的深入研究成为可能。进而可以从方法学探讨微生物生物多样性、分布格局、影响机制及其对全球变化的响应等。在微生物生态学研究中,群落构建与演化、分布特征(含植物-微生物相互关系)、执行群体功能的机理(生物地球化学循环等)、对环境变化的响应与反馈机理是今后需要关注的重点领域。概述了微生物生态学的概念,并初步提出其理论框架,在对比宏观生态学基础理论和模型的基础上,分析微生物多样性的研究内容、研究方法和群落构建的理论机制,展望了今后研究的重点领域。     

Molecules are more than markers: new directions in molecular microbial ecology

Macromolecules such as DNA, RNA, and proteins are widely used to quantify diversity in natural communities, to monitor the dispersal of organisms and their genes, and to trace phylogenetic relationships among organisms. With such widespread use of molecules as markers, it is easy to forget that they perform functions that are integral to the survival of organisms. The structural and functional properties of macromolecules have been intensively studied in genetics, biochemistry, and physiology. These fields, however, have not generally focused on the ecological significance of molecular variation, but instead have used defective variants as tools for identifying structure and function. Understanding the significance of molecular variation for organismal success or failure is a central problem in ecology, one whose solution will require the integration of diverse approaches and perspectives from ecology, molecular biology, genetics, physiology, and evolutionary biology. I review several studies of bacterial populations evolving in simple environments that have begun to integrate these approaches and perspectives in order to examine the consequences of molecular variation for ecological performance.     

Plant ecology of Australia's tropical floodplain wetlands: a review

AIMS: Despite the biodiversity values of the freshwater floodplains of northern Australia being widely recognized, there has not been a concomitant investment in developing the extent of knowledge of the basic functions and ecological processes that underpin the ecological character of these habitats. This review addresses the extent of our knowledge on the plant ecology of these wetlands and covers: the relationships between the climate and the hydrological regime on the floodplain; the vegetation patterns, succession and adaptation; and primary production. SCOPE: Information is available on the seasonal, but less regularly on the inter-annual, dynamics of the macrophytic vegetation and its evident inter-relationship with the extent, depth and duration of inundation by seasonal flooding. The available scientifically collected information on plant distribution and relationship with the water regime could be complemented by more attention to traditional knowledge. The productivity of the vegetation is high-the dominant wetland grass species have an annual dry weight production of 0.5-2.1 kg m-2 and the surrounding riparian (Melaleuca) trees contribute litterfall of 0.7-1.5 kg (dry weight) m-2 year-1, approximately 70% due to leaf-fall. The availability of dissolved oxygen in the water is known to vary diurnally and seasonally, at least in some habitats. The importance of seasonal differences in the availability of dissolved oxygen for the growth of micro- and macrophytic vegetation has not been investigated. The seasonal distribution and growth of plant species on a few floodplains have been investigated, and maps at scales of 1:10,000 to 1:100,000 are available for these. However, only on a few occasions have longer term analyses been conducted and long-term changes in the vegetation measured and assessed. Species lists and categorization of growth strategies and forms are available and provide a basis for further ecological investigation. CONCLUSIONS: Despite the large investment in managing the many pressures that have degraded the ecological character of these highly valued wetlands, the fundamental ecological processes that underpin the biodiversity values have not received the same level of attention. Further information on plant growth and the environmental factors that drive seasonal and annual changes in vegetation distribution and productivity is required to assist managers in attending to changes due to increasing invasive species and changes in fire regimes.     

Using ecological networks to answer questions in global biogeography and ecology

Ecological networks have classically been studied at site and landscape scales, yet recent efforts have been made to collate these data into global repositories. This offers an opportunity to integrate and upscale knowledge about ecological interactions from local to global scales to gain enhanced insights from the mechanistic information provided by these data. By drawing on existing research investigating patterns in ecological interactions at continental to global scales, we show how data on ecological networks, collected at appropriate scales, can be used to generate an improved understanding of many aspects of ecology and biogeography—for example, species distribution modelling, restoration ecology and conservation. We argue that by understanding the patterns in the structure and function of ecological networks across scales, it is possible to enhance our understanding of the natural world.     

Functional classifications and their application in phytoplankton ecology

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Riverine landscapes: taking landscape ecology into the water

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Temporal ecology in the Anthropocene

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Theories based on simple principles have provided much insight into the common processes that underpin complex ecological systems. Although such theories (e.g. neutral theory, metabolic theories) often neglect specific ecological details, they compensate for this with their generality and broad applicability. We review several simple principles based on ‘thermodynamic extremization’ (the minimization or maximization of a thermodynamic quantity) and explore their application and relevance to ecology. Thermodynamic extremization principles predict that certain energetic quantities (e.g. entropy production) will tend towards maxima or minima within ecological systems, subject to local constraints (e.g. resource availability). These principles have a long history in ecology, but existing applications have had a theoretical focus and have made few quantitative predictions. We show that the majority of existing theories can be unified conceptually and mathematically, a result that should facilitate ecological applications of thermodynamic extremization principles. Recent developments in broader ecological research (e.g. metabolic theories) have allowed quantitative predictions of ecological patterns from thermodynamic extremization principles, and initial predictions have been supported by empirical data. We discuss how the application of extremization principles could be extended and demonstrate one possible extension, using an extremization principle to predict individual size distributions. A key focus in the application of thermodynamic extremization principles to mainstream ecological questions should be the generation of quantitative predictions and subsequent empirical validation.     

Ancient lakes revisited: from the ecology to the genetics of speciation

Explosive speciation in ancient lakes has fascinated biologists for centuries and has inspired classical work on the tempo and modes of speciation. Considerable attention has been directed towards the extrinsic forces of speciation—the geological, geographical and ecological peculiarities of ancient lakes. Recently, there has been a resurgence of interest in the intrinsic nature of these radiations, the biological characteristics conducive to speciation. While new species are thought to arise mainly by the gradual enhancement of reproductive isolation among geographically isolated populations, ancient lakes provide little evidence for a predominant role of geography in speciation. Recent phylogenetic work provides strong evidence that multiple colonization waves were followed by parallel intralacustrine radiations that proceeded at relatively rapid rates despite long‐term gene flow through hybridization and introgression. Several studies suggest that hybridization itself might act as a key evolutionary mechanism by triggering major genomic reorganization/revolution and enabling the colonization of new ecological niches in ancient lakes. These studies propose that hybridization is not only of little impediment to diversification but could act as an important force in facilitating habitat transitions, promoting postcolonization adaptations and accelerating diversification. Emerging ecological genomic approaches are beginning to shed light on the long‐standing evolutionary dilemma of speciation in the face of gene flow. We propose an integrative programme for future studies on speciation in ancient lakes.     

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Symposium introduction: The importance of scale in ecology

Abstract Conceptual issues about scale, both spatial and temporal, have had considerable influence on the way in which ecologists view populations, communities and ecosystems. Scale includes two aspects: the extent over which a community or ecosystem is studied, and the resolution or ‘grain’ at which measurements or experiments are conducted. We illustrate the influence of extent and grain on perceptions of ecological patterns and processes, derived from fundamental measurements, field experiments and theory and modelling. These concepts provide background for a series of subsequent papers that were presented at a symposium on spatial and temporal scaling in freshwater systems. These papers conclude that multi-scale measurements and experiments plus novel methodologies for analysing large-scale surveys and manipulations should be priorities for future research in freshwater systems.     

BP神经网络在沙棘生态功能评价中的应用

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Restoration of living environment based on vegetation ecology: Theory and practice

The foundation of ecological restoration is how to preserve biocoenoses (i.e. functional ecosystems) and how to restore and reconstruct them where they were destroyed. One of the most important challenges is the restoration of complex, multilayer forests representing the potential natural vegetation. Native forests have functions in disaster mitigation and environmental protection, as well as providing the basis of existence for local people and maintaining gene pools for the future. Through vegetation surveys in Japan and South-east Asia, we have established basic principles in vegetation-ecological restoration of forests. We have been restoring expected disaster-mitigation and environmental protection forests, as experimental reforestation projects, since the 1970s at more than 750 sites throughout the 3000km long Japanese Archipelago, and since the 1980s in parts of South-east Asia, China and South America. The restoration movement has spread from a local activity to a global movement. We aim for the sustainable development of human society through ecological restoration of living environments.