Microtaphonomy of bioclasts and paleoecology of microencrusters from Upper Jurassic spongiolithic limestones (External Prebetic,Southern Spain)

Microencrusters and microtaphonomic features of the Oxfordian spongiolithic limestones of the External Prebetic were studied using thin-section analysis. The spongiolithic limestone is a bioclastic-rich packstone with common echinoderm, mollusc and brachiopod remains. The bioclasts show a high fragmentation index and frequent microborings. The encrustation index (E _i) is higher for fragments of serpulids, ammonoids and bivalves, and increases with the initial grain-size of bioclasts. The main microencrusters consist of benthic microbial communities (BMC) and nubeculariids, as well as subordinate calcareous and siliceous agglutinated foraminifera, serpulids and bryozoans. BMC are usually the first colonizers, and encrusting foraminifera mainly appear on bioclasts larger than 2 mm. BMC dominate in well-developed encrustations on upward facing surfaces of larger bioclasts that are also colonized by foraminifera (nubeculariids and Subdelloidina). Bullopora, serpulids and bryozoans are more common on lower surfaces. The fact that the values of encrustation index, encrustation thickness and diversity of the microencrusters increase with the size of bioclasts is related to a higher stability and exposure time of the available bioclastic substrate. The microencruster distribution on upper and lower surfaces of large bioclasts may be related to photic control, space competition and/or predation avoidance.     

Remarks on the systematic position of Lithocodium Elliott, a problematic microorganism from the Mesozoic carbonate platforms of the Tethyan realm

The encrusting genus Lithocodium Elliott, widespread in Tethyan Triassic-Cretaceous carbonate platforms and interpreted in the past as a codiacean alga, is presently regarded as a colony of calcified cyanobacteria, a microorganism incertae sedis or a loftusiacean foraminifer. The absence of apertures connecting neighbouring cavities, as well as the very irregular form and arrangement of these hollows within a frequently massive micritic matrix, excludes assigning Lithocodium to the foraminifers, but could rather suggest colonies of calcified cyanobacteria.     

Burmannia bengkuluensis sp. nov. (Burmanniaceae) from Sumatra

A new species of Burmannia (Burmanniaceae), Burmannia bengkuluensis Tsukaya et Daernadi, discovered in a swamp adjacent to Bengkulu Airport, Sumatra, Indonesia, is described. It has poorly developed photosynthetic leaves and resembles B. ledermannii Jonker, described from a specimen collected in Palau, in having poorly developed leaves, narrowly 3‐winged erect flowers, and in particular, funnel‐shaped anthers, but differs in having dark purple flowers, longer outer perianth lobes, well‐developed, fan‐shaped inner perianth lobes, and a thick and short style. Sequence data on genomic DNA regions covering ITS1 and ITS2 are also provided.     

Colony Structure in Flustra foliacea (Linnaeus) (Bryozoa,Chéilostomata)

Encrusting forms presumably represent the original mode of growth in the bryozoans. They usually exhibit a relatively low degree of colony integration. The numerous different erect colony types, certainly independently derived from this stage, show a higher degree of integration. Eventually forms arise with a strict pattern only little influenced by the environment. The Flustra foliacea colony holds an intermediate position in this respect. It forms an initial crust on a foreign substratum such as rock. The crust forms marginal lobes. The lobes collide two and two. The two components of each collision then rise back to back, owing to lack of space, into bilaminar fronds. The two zooid layers composing these erect branches and mutually encrusting the “auto-substratum” of their respective basal walls, grow much more rapidly than the initial crust on the “heterosubstratum” of the rock to finally comprise more than 95 % of the colony volume. The different rate of growth on “auto-” and “heterosubstratum” respectively is interpreted as indicating a preference for the “autosubstratum” and as the main force in the formation of erect branches. The Fl. foliacea case indicates one of the pathways from encrusting to erect colonies in the bryozoans. It is probably valid for at least some of the erect bilaminar colonies appearing in different parts of the bryozoan system.     

Detecting cryptic species in sympatry and allopatry: analysis of hidden diversity in Polyommatus (Agrodiaetus) butterflies (Lepidoptera: Lycaenidae)

Modern multilocus molecular techniques are a powerful tool in the detection and analysis of cryptic taxa. However, its shortcoming is that with allopatric populations it reveals phylogenetic lineages, not biological species. The increasing power of coalescent multilocus analysis leads to the situation in which nearly every geographically isolated or semi‐isolated population can be identified as a lineage and therefore raised to species rank. It leads to artificial taxonomic inflation and as a consequence creates an unnecessary burden on the conservation of biodiversity. To solve this problem, we suggest combining modern lineage delimitation techniques with the biological species concept. We discuss several explicit principles on how genetic markers can be used to detect cryptic entities that have properties of biological species (i.e. of actually or potentially reproductively isolated taxa). Using these principles we rearranged the taxonomy of the butterfly species close to Polyommatus (Agrodiaetus) ripartii. The subgenus Agrodiaetus is a model system in evolutionary research, but its taxonomy is poorly elaborated because, as a rule, most of its species are morphologically poorly differentiated. The taxon P. (A.) valiabadi has been supposed to be one of the few exceptions from this rule due to its accurately distinguishable wing pattern. We discovered that in fact traditionally recognized P. valiabadi is a triplet of cryptic species, strongly differentiated by their karyotypes and mitochondrial haplotypes.     

Microbial crusts of the late jurassic: Composition,palaeoecological significance and importance in reef construction

Summary Upper Jurassic reefs contain variable amounts of calcareous microbial crusts. In examples from Portugal, Spain and southern Germany they occur within coral biostromes and bioherms, mixed coral-siliceous sponge reefs, siliceous sponge meadows and mudmounds, and build up thrombolities with or without additional reef metazoans. The crusts are of paramount importance for the establishment and development of positive buildups. Commonly, reef growth starts with crusts which develop from a narrow base and rapidly expand laterally by rising above the sea floor. Reef associations with little or no microbial crust normally did not develop distinct relief. The basic microbial crust type is characterised by a dense to peloidal, mostly clotted, hence thrombolitic fabric which developed due to calcification triggered by microbes. Morphological evidence for this organic nature are positive relief, bridge-structures, and the shape and arrangement of peloids. The basic thrombolitic crust type is a eurytopic feature, equally occurring in settings of different bathymetry, waterenergy, salinity and oxygen/nutrient concentrations. However, the crusts also comprise additional micro-encrusters of variable abundance and diversity. The concurrent occurrence of these encrusters and diversity trends allows discrimination between crusts of different environments, particularly of different water depths. Microbial crusts from non-reefal marine oncoids show both similarities and differences with reefal crusts. For some of the mostly enigmatic micro-encrusters new clues to their nature could be detected. For instance, bubble-like structures, formerly interpreted as sporangia inLithocodium could be identified as the foraminiferBullopora aff.laevis, possibly living as a parasite or symbiont in theLithocodium algal tissue.Lithocodium andBacinella are regarded as different organisms.‘Tubiphytes’ morronensis clearly represents a symbiotic intergrowth between a nubeculinellid foraminifer and a microbe of unknown nature. The main prerequisite for the occurrence of microbial crusts is a cessation of background sedimentation which commonly can be tied to rises in sea level. This results in the development of crust-rich reefs. Fluctuations in oxygen and nutrient levels are indicated by dysaerobic bivalves and richness in authigenic glauconite, and led to the microbes outcompeting reefal metazoans, and to the development of thrombolites. Such thrombolites occur at very different depths which is interpreted to be related to a rise of dysaerobic waters due to climatic buffering and lowering of oceanic circulation during sea level rises. Microbial crusts in modern reefs are largely restricted to shaded, cryptic settings which contrasts with the wide distribution of crusts in Upper Jurassic reefs. Microbial crusts were increasingly replaced by coralline red algae since the Late Mesozoic, but despite their restricted modern habitat seem to still play an important, commonly overlooked role in the stabilisation of reef framework.     

Comparative physiological studies on the growth of cryptic species of Bostrychia intricata (Rhodomelaceae,Rhodophyta) in various salinity and temperature conditions

Inter‐ and intra‐specific physiological variations of intertidal macroalgae have been well investigated. However, studies on physiological responses of cryptic algal species have been poorly documented. Bostrychia intricata is a widespread marine red alga in the Southern Hemisphere, and has many cryptic species. We investigated the effect of different salinities and temperatures on the specific growth rate of three cryptic species (N2, N4 and N5) of B. intricata from New Zealand. Our data indicated that all cryptic species grew at the full range of salinities and temperatures tested, but exhibited a significant difference in their specific growth rates. Cryptic species N4 had a higher growth rate than the other two cryptic species under all experimental conditions, whereas cryptic species N2 occasionally showed a higher growth rate than cryptic species N5 at high salinities and lower temperatures. The distinct physiological properties of these cryptic species may explain their distribution pattern (a wider distribution of cryptic species N4 than N2 and N5) in New Zealand. The physiological divergence between the cryptic species could be related to their levels of evolutionary divergence, with more similar physiology between cryptic species, which share a more recent common ancestor (N2 and N5). Our findings underline that morphologically indistinguishable cryptic algal species are different in many other aspects and are truly independent entities.     

A CHARACEAN THALLUS WITH ATTACHED GYROGONITES AND ASSOCIATED FOSSIL CHAROPHYTES FROM THE MAASTRICHTIAN OF THE EASTERN PYRENEES (CATALONIA,SPAIN)1

The new species Clavatoraxis microcharophorus is described from the Lower Maastrichtian of the Eastern Pyrenees (Catalonia, Spain). Microchara sp. gyrogonites were found in anatomical connection with this thallus, attached to bract‐cell rosettes and coated by a structural tunica, formed by an expanded bract cell. This is a feature unknown in extant characeans, which only display lime incrustations similar to tunicae in extremely alkaline and well‐illuminated environments. This is the first time that a complete fossil characean is described. The attribution of characean vegetative remains to the genus Clavatoraxis shows that this genus is not exclusive of clavatoraceans as previously thought. The taphonomic study of C. microcharophorus sp. nov. and associated fossil charophytes, along with sedimentological and microfacies analyses, has enabled us to characterize the habitat of this species in the Maastrichtian lake of Vallcebre. They grew forming meadows, and their remains were deposited in the poorly oxygenated lake bottom, where they were well preserved. A number of other characeans and porocharaceans were living in shallower belts. This was the case for Peckichara sp. and Munieria grambasti in the freshwater lacustrine meadows. Another species, Feistiella malladae, was found parautochthonous in brackish lakes.     

Conservation status of the two cryptic species of Hamatocaulis vernicosus (Bryophyta) in Sweden

Cryptic species are rarer than their combined, morphologically recognisable species. Each cryptic species may have its own habitat requirements and distribution, and each should be considered separately in biodiversity conservation. This investigation explores how well the two cryptic species of the wetland moss Hamatocaulis vernicosus (Mitt.) Hedenäs s.l., included in Annex II of the EU Habitat Directive, are safeguarded in existing protected sites in Sweden. Further, the northern distribution limit of the southern of the two cryptic species is explored. The distributions of the two cryptic species and their intraspecific variation are judged by the nuclear ITS1?+?2 and the two chloroplast markers rpl16 and trnL-trnF for a set of 89 specimens. The genetic differences between the two cryptic species are significant, but there are no differences between the protected and non-protected subsets within the respective species. The protected areas therefore represent these two species’ genetic variation well. The populations of both cryptic species appear stable, according to their genetic signals. One of the two cryptic species occurs almost throughout Sweden, whereas the other occurs only to the south of the southern limit of the southern boreal zone, except for two finds slightly further north in climatically mild areas.     

Functional phenotypic plasticity of the endolithic mytilid Leiosolenus curtus (Lischke, 1874) (Bivalvia: Mytilidae)

In Sagami Bay, Japan, Leiosolenus curtus (Lischke, 1874) bores into dead shells of rock barnacles (Tetraclita japonica) in Manazuru, calcareous sand-rock in Oiso, weathered tuff in Miura and agglomerates formed by the tubes of clam worms (Spirobranchus kraussii) in Kanaya. In order to understand the relationships between morphology and environment, the shell morphologies and genetic characteristics of L. curtus, together with the calcium content of the different bored substrata, were analysed. Individuals from Kanaya and Manazuru were characterised by a chalk-like encrustation and a more rounded and inflated shell shape, while those from Oiso and Miura had a striated encrustation. The molecular phylogenetic tree and haplotype network showed that the genetic sequences of the individuals from all investigated localities were very similar, and implied that they belong to the same species. The striated encrustation of the individuals from Oiso and Miura presumably enables them to scrape those residues not dissolved by the mucus secreted by the mantle gland, and thereby to bore into non-calcareous substrata. The more rounded and inflated shell shape of the individuals from Manazuru is thought to be advantageous for boring into thin substrata.     

The presence of a cryptic barrier in the West Pacific Ocean suggests the effect of glacial climate changes on a widespread sea‐dispersed plant,Vigna marina (Fabaceae)

Ocean currents are an important driver of evolution for sea‐dispersed plants, enabling them to maintain reciprocal gene flow via sea‐dispersed diaspores and obtain wide distribution ranges. Although geographic barriers are known to be the primary factors shaping present genetic structure of sea‐dispersed plants, cryptic barriers which form clear genetic structure within oceanic regions are poorly understood. To test the presence of a cryptic barrier, we conducted a phylogeographic study together with past demographic inference for a widespread sea‐dispersed plant, Vigna marina, using 308 individuals collected from the entire Indo‐West Pacific (IWP) region. Chloroplast DNA variation showed strong genetic structure that separated populations into three groups: North Pacific (NP), South Pacific (SP) and Indian Ocean (IN) (F′_CT among groups = 0.954–1.000). According to the Approximate Bayesian computation inference, splitting time between NP and SP was approximately 20,200 years (95%HPD, 4,530–95,400) before present. Moreover, a signal of recent population expansion was detected in the NP group. This study clearly showed the presence of a cryptic barrier in the West Pacific region of the distributional range of V. marina. The locations of the cryptic barrier observed in V. marina corresponded to the genetic breaks found in other plants, suggesting the presence of a common cryptic barrier for sea‐dispersed plants. Demographic inference suggested that genetic structure related to this cryptic barrier has been present since the last glacial maximum and may reflect patterns of past population expansion from refugia.     

Structure of Adnate Colony Portions in Crisiidae (Bryozoa Cyclostomata)

The “rhizoidsrdquo; surrounding the base of the erect “colony” emanating from the ancestrula in the Crisiidae, especially the simple species Crisidia cornuta (L.), are a regular adnate system of autozooids. Each autozooid is composed of a proximal adnate part and a distal peristome (in some species kenozooids are possibly intercalated). The autozooid peristomes support erect branches identical in budding and structure with the branch emanating from the erect peristome of the ancestrula. Thus, the complete crisiid colony consists of an adnate system of ancestrula and autozooids, which form erect branches from their peristomes. The adnate zooid system is comparable in autozooid morphology and budding pattern with simple uniserial stomatoporids. The tentative hypothesis is proposed that the crisiid group has developed from primitive stomatoporids; the adnate zooid system of the stomatoporids apparently evolved peristomial budding to produce the erect colony branches characteristic of crisiids.     

Integrative taxonomy reveals cryptic Amazonian species of Pristimantis (Anura: Strabomantidae)

Hypotheses on the taxonomic status of two Bolivian Pristimantis with taxonomic problems are assessed by an integrative taxonomic approach that integrates three independent lines of evidence: external morphology, prezygotic reproductive barriers (advertisement calls) and reciprocal monophyly (phylogenetic analyses of partial 16S mtDNA sequences). Central Andean Bolivian populations previously assigned to either P. peruvianus or P. dundeei, and lowland Amazonian populations from southern Peru and northern Bolivia previously considered P. peruvianus do not correspond to these species. Indeed, multivariate analyses of qualitative and quantitative morphological and bioacoustic characters, and phylogenetic analyses support the hypothesis that they represent different, previously unknown, cryptic lineages. They are herein described as new species. The former is a sibling species of P. fenestratus that inhabits the Amazonian and semideciduous forests of the Andean foothills in central Bolivia. The latter is sibling to the Andean species P. danae and is parapatric to it in the Amazonian lowland forests and adjacent foothills of northern Bolivia, southern Peru and adjacent Brazil. Most species of Neotropical frogs, and especially Pristimantis, have been described by using external qualitative morphological characters only. An extended integrative taxonomic approach, as exemplified herein, may lead to the discovery of many other cryptic and sibling lineages that would increase the species numbers of tropical areas. © 2009 The Linnean Society of London, Zoological Journal of the Linnean Society, 2009, 155 , 97–122.     

Interaction of poly(I) and poly(I)·poly(C) with chlorodiethylenetriamino platinum(II) chloride

The fixation of dien-Pt on poly(I)·poly(C) leads to only minor changes in the uv and CD spectra at ambient temperature, showing that there is little perturbation of the secondary structure in the r_b range studied (up to 0.30). However, the melting profiles show two steps. The T_m for strand separation increases linearly from 61°C (r_b = 0) to 80°C (r_b = 0.18), after which it declines on further increasing the r_b. The second melting step is not complete at 100°C, and the magnitude of the absorbance change in this second step also appears to be at a maximum at r_b = 0.18. Although dien-Pt can only coordinate to one base, the nmr spectra at 80°C also show a second type of interaction with the adjacent bases, which is only destroyed in the presence of a strong denaturing agent, 5M guanidinium hydrochloride. From these results and the spectrophotometric data, we observe that dien-Pt forms a triple sandwich by hydrogen bonding of the platinum amino groups to the adjacent hypoxanthine bases (N⁷). The presence of these hydrogen bonds accounts for the increased stability (maximal at one Pt to three hypoxanthine bases) and their rupture is seen in the second melting step. No interaction has been observed with poly(C) strand. Reaction of dien-Pt with poly(I) shows the formation of the same triple sandwich structure in the nmr spectra.     

Patterns of sclerobiont colonization on the rugose coral Schlotheimophyllum patellatum (Schlotheim, 1820) from the Silurian of Gotland,Sweden

Analysis of mushroom-shaped rugose corals Schlotheimophyllum patellatum (Schlotheim, 1820) from the Silurian (Upper Visby Beds, Lower Wenlock, Sheinwoodian) of Gotland, Sweden, showed that they were colonized on both the upper (exposed) and lower (cryptic) sides by a variety of encrusting and boring (sclerobiont) biotas, represented by 10 taxa and at least 23 species. Bryozoans and microconchid tubeworms, the most abundant encrusters, dominated on the cryptic undersides of the corals, while the dominant endobionts responsible for Trypanites borings overwhelmingly dominated the exposed surfaces. Except for cnidarian sphenothallids, which were exclusive colonizers of the underside of only one coral host, no other encrusters could be referred to as obligate cryptobionts. Because the upper surface of these corals was likely covered by soft-tissues during life, in specimens lifted off the sea-floor sclerobionts must have settled on the cryptic sides first. They could colonize the upper side only after the coral’s death, unless it was covered by sediment as could be the case in some flat specimens. With time, the space on the underside of the coral skeleton may have progressively been filled by sediment as well, precluding further colonization by sclerobionts. In that respect, the colonization patterns of these corals by encrusters and borers were controlled by the complex interplay of environmental factors, sclerobiont dynamics and coral growth in a given Silurian habitat. Compared with Silurian stromatoporoid hosts, the sclerobiont diversity and abundance noted on the Schlotheimophyllum corals may be regarded as representative for the Silurian as a whole.     

The circumscription of Karimbolea Descoings (Asclepiadaceae)

The hitherto monotypic and isolated Madagascan genus Karimbolea is redefined. One species is added to the genus and the new combination K. macrantha (Jum. & H. Perrier) Liede & Meve is provided. The unusual erect orientation of the pollinia in the type species, K. verrucosa, is interpreted as secondary shift from a pendulous position (tribe Asclepiadeae) rather than an indication for affinities with tribes characterized by erect pollinia (Stapelieae, Marsdenieae).     

The first record of the genus <Emphasis Type="Italic">Isurichthys</Emphasis> (Perciformes,Ariommatidae) in the Lower Oligocene of the Northern Caucasus

An ariommatid fish, Isurichthys breviusculus sp. nov. (Perciformes), from the Lower Maikopian (Lower Oligocene) of the northern Caucasus (Apsheronsk District) is described based on an almost complete skeleton. This is the first record of the Oligocene genus Isurichthys in the Caucasus. Direct evidence of the presence of a toothed pharyngeal sac in the oesophagus of Isurichthys is obtained for the first time. Of two known species of Isurichthys, the new species is closer to I. roumanus Baciu et Bannikov, 2004 from the Oligocene of Romania. The fossil record of Stromateoidei sensu stricto is reviewed.