Relationships Between Environmental Variables and Benthic Diatom Assemblages in California Central Valley Streams (USA)

This study examines distributional patterns of benthic diatom assemblages in relation to environmental characteristics in streams and rivers in the California Central Valley ecoregion. Benthic diatoms, water quality, and physical habitat conditions were characterized from 53 randomly selected sites. The stream sites were characterized by low mid-channel canopy cover and high channel substrate embeddedness. The waters at these sites were enriched with minerals and turbidity varied from 1.3 to 185.0 NTU with an average of 13.5 NTU. A total of 249 diatom taxa were identified. Average taxa richness was 41 with a range of 7–76. The assemblages were dominated by Staurosira construens (11%), Epithemia sorex (8%), Cocconeis placentula (7%), and Nitzschia amphibia (6%). Multivariate analyses (cluster analysis, classification tree analysis, and canonical correspondence analysis) all showed that benthic diatom assemblages were mainly affected by channel morphology, in-stream habitat, and riparian conditions. The 1st CCA axis negatively correlated with mean wetted channel width (r = −0.66) and thalweg depth (r = −0.65) (Table 4). The 2nd axis correlated with % coarse substrates (r=0.60). Our results suggest that benthic diatoms can be used for assessing physical habitat alterations in streams.     

Bioenergy harvest,climate change,and forest carbon in the Oregon Coast Range

Forests provide important ecological, economic, and social services, and recent interest has emerged in the potential for using residue from timber harvest as a source of renewable woody bioenergy. The long‐term consequences of such intensive harvest are unclear, particularly as forests face novel climatic conditions over the next century. We used a simulation model to project the long‐term effects of management and climate change on above‐ and belowground forest carbon storage in a watershed in northwestern Oregon. The multi‐ownership watershed has a diverse range of current management practices, including little‐to‐no harvesting on federal lands, short‐rotation clear‐cutting on industrial land, and a mix of practices on private nonindustrial land. We simulated multiple management scenarios, varying the rate and intensity of harvest, combined with projections of climate change. Our simulations project a wide range of total ecosystem carbon storage with varying harvest rate, ranging from a 45% increase to a 16% decrease in carbon compared to current levels. Increasing the intensity of harvest for bioenergy caused a 2–3% decrease in ecosystem carbon relative to conventional harvest practices. Soil carbon was relatively insensitive to harvest rotation and intensity, and accumulated slowly regardless of harvest regime. Climate change reduced carbon accumulation in soil and detrital pools due to increasing heterotrophic respiration, and had small but variable effects on aboveground live carbon and total ecosystem carbon. Overall, we conclude that current levels of ecosystem carbon storage are maintained in part due to substantial portions of the landscape (federal and some private lands) remaining unharvested or lightly managed. Increasing the intensity of harvest for bioenergy on currently harvested land, however, led to a relatively small reduction in the ability of forests to store carbon. Climate change is unlikely to substantially alter carbon storage in these forests, absent shifts in disturbance regimes.     

Seasonal variation in the composition and rate of change of the phytoplankton community in a deep subalpine lake (Lake Garda, Northern Italy). An application of nonmetric multidimensional scaling and cluster analysis

Seasonal variations and spatial homogeneity of the phytoplankton community were followed, from spring 1991 to spring 1992, in four pelagic stations of a large deep subalpine lake (Lake Garda, Northern Italy). Both cluster analysis and nonmetric multidimensional scaling (NMDS) applied to Bray & Curtis' dissimilarity matrices computed on density and biovolume data were employed; the Bray & Curtis index, calculated between pairs of chronologically contiguous samples, was also used as a measure of the community change rate over the temporal succession. In the tree diagrams obtained both from density and biovolume data, six groups of different size have been identified, with ordered sequences of samples within them. Superimposition of the results of cluster analysis on the NMDS configurations has allowed interpretations of the trajectories of the samples as a chronological and cyclical succession of compositionally homogeneous groups. A clear relationship between the community change rate and stability of the water column has been assessed. The specific composition of the six groups has been discussed in relation to environmental variables and in terms of adaptive strategies. During winter (winter-spring group) the turbulence of the water and the availability of nutrients favour the development of colonial Bacillariophyceae (Fragilaria crotonensis Kitton, Tabellaria fenestrata (Lyngb.) Kütz., Aulacoseira spp.), Cyanophyceae (Planktothrix agardhii (Gom.) Anagn. et Kom. and Planktolyngbya limnetica (Lemur.) Kom.-Legn. et Cronb.) and Cryptophyceae. In late spring group, with the stabilisation of the water column and silicon depletion, the diatoms give way to small, opportunistic species (Ankyra judayi (G. M. Smith) Fott, Cyclotella spp., Chroomonas acuta Utermhöl) and larger species (Ceratium hirundinella (O. F. Müll.) Dujardin). The three summer groups are characterised by a development of Chlorophyceae (chiefly Chlorococcales), Cyanophyceae (mainly Chroococcales), Cyclotella spp. and Dinophyceae. With the autumn destratification the summer community undergoes a rearrangement principally in favour of Cyanophyceae and Cryptophyceae.     

Dimensionality Reduction and Visualization of the Environmental Impacts of Domestic Appliances

There is an increasing worldwide concern about the problem of dealing with the waste electrical and electronic equipment (WEEE), given the high volume of appliances that are disposed of every day. In this article, an environmental evaluation of WEEE is performed that combines life cycle assessment (LCA) methodology and multivariate statistical techniques. Because LCA handles a large number of data in its different phases, when one is trying to uncover the structure of large multidimensional data sets, multivariate statistical techniques can provide useful information. In particular, principal‐component analysis and multidimensional scaling are two important dimension‐reducing tools that have been shown to be of help in understanding this type of complex multivariate data set. In this article, we use a variable selection method that reduces the number of categories for which the environmental impacts have to be computed; this step is especially useful when the number of impact categories or the number of products or processes to benchmark increases. We provide a detailed illustration showing how we have used the proposed approach to analyze and interpret the environmental impacts of different domestic appliances.     

Stock discrimination and connectivity assessment of yellowfin seabream (Acanthopagrus latus) in northern South China Sea using otolith elemental fingerprints

Connectivity between fish stocks is fundamental to the understanding of population dynamics and the implementation of sustainable fisheries management. Otolith microchemistry is a promising tool as it can provide information on the continuous growth of otoliths and the environmental effects on otolith composition. Such elemental fingerprints can help distinguish different stocks or life history stages, identify the origins or nursery areas of fish, and assess population structure. In this study, we examined the stock discrimination and spatial connectivity of cage-cultured and wild stocks of yellowfin seabream (Acanthopagrus latus) from the coastal waters of Shantou, Yangjiang, and Zhanjiang in China southern province Guangdong during 2012–2014, based on otolith trace-elemental signatures using multivariate statistical analysis and machine learning approaches. The concentrations of 13 elements (⁷Li, ²³Na, ²⁴Mg, ⁴⁰Ca, ⁵⁵Mn, ⁵⁶Fe, ⁵⁹Co, ⁵⁹Ni, ⁶⁴Cu, ⁶⁵Zn, ⁸⁸Sr, ¹²²Sb, and ¹³⁷Ba) in the natal spot of fish otoliths, representing the embryonic and paralarval stages of fish, were analyzed using laser ablation inductively coupled plasma mass spectrometry (LA-ICP-MS). Stepwise discriminant analysis and random forests were used to distinguish the cultured and wild stocks of yellowfin seabream, and non-metric multidimensional scaling (NMDS) and cluster analysis were used to determine the spatial variation and connectivity of yellowfin seabream stocks. Overall, the cultured and wild stocks of yellowfin seabream could be identified with classification accuracy of 80.7% and 99.2% by using stepwise discriminant analysis and random forests respectively. When we compared site difference between cultured and wild stocks (site × stock interactions), the classification success was 60.4% for stepwise discriminant analysis and 85.7% for random forests. The misclassification of cultured and wild stocks within the three sites suggested the spatial connectivity between stocks and among sampling locations. Our findings suggested that the three wild stocks of yellowfin seabream from Guangdong coastal waters could be considered as one unit for management, and the difference between cultured and wild stocks was significant for yellowfin seabream from Shantou and Yangjiang, but less significant for yellowfin seabream from Zhanjiang. This study demonstrated that otolith elemental fingerprints can help improve our knowledge on the spatial connectivity, population structure, and life history of fish stocks, and random forests can be a useful tool for identifying cultured and wild stocks compared to the traditional stepwise discriminant analysis.     

三峡水库175 m试验性蓄水期库区及其上游江段鱼类群落结构时空分布格局

根据2010—2012年在三峡水库及其上游江段5个江段的商业性渔获物调查结果,对该区域鱼类群落结构的时空分布格局进行了分析。调查中共收集到鱼类87种,隶属于8目18科63属。沿坝前江段溯河而上至库尾以上流水江段,鱼类种类数逐渐增加。采用聚类分析(CA)和非度量多维标度(NMDS)方法对三峡水库175 m试验性蓄水期间各江段的鱼类种类组成进行分析,发现这5个调查江段的鱼类种类组成可以分为两个类群:类群Ⅰ包括秭归、巫山、云阳3个库区的江段,其鱼类种类组成在各年间的差异程度较大;而类群Ⅱ包括库尾的涪陵江段以及上游的江津江段,其鱼类种类组成在各年间差异程度较小。采用CA和NMDS方法对鱼类群落结构时空分布格局的分析结果表明,5个调查江段的鱼类群落结构在各年间可以分为不同类群;云阳与涪陵江段的鱼类群落结构的相似性逐年增加,而与秭归、巫山江段的相似性逐年减少;涪陵江段与江津江段的鱼类群落结构相似性也呈逐年减少趋势。总体而言,175m试验性蓄水对库中和库尾江段的鱼类群落结构的影响较大,但对库首以及库尾以上流水江段的影响均较小。     

Relationships between environment and mountain riparian plant communities associated with two rare tertiary-relict tree species, Euptelea pleiospermum (Eupteleaceae) and Cercidiphyllum japonicum (Cercidiphyllaceae)

Euptelea pleiospermum and Cercidiphyllum japonicum are dominant relictual tree species of the riparian plant communities in the subtropical region of Shennongjia Mountains, central China. Community survey and multivariate analysis were carried out to characterize their ecological ranges and regeneration characteristics, and further to explore the factors determining their present distribution boundaries and the barriers restricting their range expansion. We recorded 303 woody species, among which there were 14 relictual, rare and/or endemic woody species. Results obtained from cluster analysis corroborated the results from non-metric multidimensional scaling (NMS) ordination, classifying the 42 plots into three well-defined associations. Correlation analysis revealed that variation in species composition among associations was partly explained by some physical (altitude, slope, soil temperature) and chemical (available K, NH₄, pH) properties. Multiple regression analyses with data of adults and seedlings with physical and chemical variables revealed contrasting patterns of the two dominant relictual species. Both taxa have a high resprouting rate that keeps the stands stable irrespective of scarcity of seedlings. However, expansion of the distribution range is difficult in such a situation. E. pleiospermum prefers riparian habitats with poor nutrients in the south-facing slope of the Shennongjia Mountains, which may indicate that this species is light-demanding at some life stages and well adapted to a nutrient-poor habitat where competition from other species is limited. The Cercidiphyllum japonicum population was more scattered and fragmented, and preferred riparian habitats on gentle slopes. Both species are favored by the mild and moist microclimate, but the current conditions in these subtropical mountain riparian habitats probably do not really provide optimal ecological conditions for the two relictual species.     

舟山海域夏、秋季浮游动物的分布特征及其与环境因子的关系

为更好地了解舟山海域浮游动物的群落结构、生物量和丰度的时空分布特征及其与主要环境因子的关系,分别于2014年7月和10月进行了夏季、秋季两次生态综合调查,并用多维尺度分析法、典范对应分析法对浮游动物群落结构进行了研究。结果表明:夏季舟山海域调查的浮游动物有13类,64种,优势种为背针胸刺水蚤(Centropages dorsispinatus)、圆唇角水蚤(Labidocera rotunda)、中华哲水蚤(Calanus sinicus)、精致真刺水蚤(Euchaeta concinna)、百陶带箭虫(Zonosagitta bedoti)和真刺唇角水蚤(Labidocera euchaeta);秋季鉴定到浮游动物12类,45种,优势种为背针胸刺水蚤(Centropages dorsispinatus)、百陶带箭虫(Zonosagitta bedoti)、双生水母(Diphyes chamissonis)、瓜水母(Beroёcucumis)和中华哲水蚤。夏季浮游动物平均丰度及平均生物量(144.0 ind/m3和176.3 mg/m~3)都分别高于秋季(21.4个/m3和86.3 mg/m3);Shannon-Wiener多样性指数夏季(3.03)高于秋季(2.82),Pielou均匀度指数则是秋季(0.83)高于夏季(0.64);夏季不同区域浮游动物群落之间具有明显的差异,而秋季大部分站位群落之间差异不显著;温度、盐度、叶绿素a浓度和营养盐含量是影响舟山海域浮游动物分布的主要环境因子;与历史资料相比,舟山海域浮游动物丰度及生物量呈下降趋势,其优势种保持较稳定。     

Comparative studies of microbial populations in the rumen,duodenum, ileum and faeces of lactating dairy cows

Aims: Understanding factors that influence the composition of microbial populations of the digestive system of dairy cattle will be key in regulating these populations to improve animal performance. Although rumen microbes are well studied, little is known of the dynamics and role of microbial populations in the small intestine of cows. Comparisons of fingerprints of microbial populations were used to investigate the effects of gastrointestinal (GI) segment and animal on community structure. Methods and Results: Samples from four lactating dairy cows with ruminal, duodenal and ileal cannulae were collected. Terminal‐restriction fragment length polymorphism (T‐RFLP) comparisons of small subunit rRNA genes revealed differences in microbial populations between GI segments (P < 0·05). No significant differences in either methanogen populations or microbial community profiles between animals were observed. Quantitative PCR was used to assay relative changes in methanogen numbers compared to procaryote rRNA gene numbers, and direct microscopic counts were used to enumerate total procaryote numbers of the duodenal and ileal samples. Conclusions: T‐RFLP comparisons illustrate significant changes in microbial diversity as digesta passes from one segment to another. Direct counts indicate that microbial numbers are reduced by eight orders of magnitude from the rumen, through the abomasum, and into the duodenum (from c. 10¹² to c. 3·6 × 10⁴ cells per ml). Quantitative PCR analyses of rRNA genes indicate that methanogens are present in the duodenum and ileum. Significance and Impact of the Study: The contribution of microbial populations of the small intestine to the nutrition and health of cattle is seldom addressed but warrants further investigation.     

Lack of tree layer control on herb layer characteristics in a subtropical forest,China

Question: Knowledge of the interaction between understorey herb and overstorey tree layer diversity is mostly restricted to temperate forests. How do tree layer diversity and environmental variables affect herb layer attributes in subtropical forests and do these relationships change in the course of succession? Do abundance and diversity of woody saplings within the herb layer shift during succession? Location: Subtropical broad‐leaved forests in southeast China (29°8′18″‐29°17′29″N, 118°2′14″118°11′12″E). Methods: A full inventory of the herb layer including all plants below 1‐m height was done in 27 plots (10 × 10 m) from five successional stages (<20, <40, <60, <80 and ≥80 yr). We quantified the contribution of different life forms (herbaceous, woody and climber species) to herb layer diversity and productivity and analysed effects of environmental variables and tree layer diversity on these attributes. Results: Herb layer composition followed a successional gradient, as revealed by non‐metric multidimensional scaling (NMDS), but diversity was not correlated to the successional gradient. There was no correlation of diversity across layers. Herb layer productivity was neither affected by tree layer diversity nor by herb layer diversity. Although abundance of woody species in the herb layer decreased significantly during succession, woody species contributed extraordinarily to herb layer species diversity in all successional stages. All environmental factors considered had little impact on herb layer attributes. Conclusions: The subtropical forest investigated displays an immense richness of woody species in the herb layer while herbaceous species are less prominent. Species composition of the herb layer shows a clear successional pattern, however, the presence or absence of certain species appears to be random.     

Ski slope vegetation at Snoqualmie Pass, Washington State, USA, and a comparison with ski slope vegetation in temperate coniferous forest zones

Ski slope vegetation at Snoqualmie Pass in Washington State, USA, was surveyed in order to identify community types and to compare it with vegetation development patterns in Japan. Ski slopes in Japan, most of which were constructed after 1960, underwent heavy land recontouring, while those at Snoqualmie Pass were constructed before 1950 with less modification. Three points apply to Japanese ski slope vegetation and differentiate these slopes from those at Snoqualmie Pass: (i) grasslands of introduced species are widespread and persistent; (ii) unvegetated patches are uncommon; and (iii) wetland vegetation has developed. These differences are mainly derived from the intensity of human impact, history of the slope and its scale: namely, ski slopes in Washington are older and larger than those in Japan. Ski slope vegetation in Washington was primarily differentiated by a soil moisture gradient. The large size of Washington ski slopes permitted the inclusion and development of wetland habitats, whereas most ski slopes in Japan are constructed on ridges and do not contain wetlands. Most introduced species in Japan are eliminated soon after seeding. In contrast, the long-term management of ski slopes decreased soil erosion and/or unvegetated patches in Washington and created relatively permanent grasslands composed of introduced species. Tsuga heterophylla and Abies amabilis were found established on the ski slopes in Washington, whereas in Japan the pioneer tree species are shade-intolerant broadleaved species. These differences may be a result of the different disturbance histories of ski slopes in the two countries. In addition, along with the conifers, early successional forbs such as Anaphalis margaritacea and Epilobium angustifolium are well established on Washington ski slopes. Results show that disturbances created by ski slope development greatly affect the vegetation, even on older, less heavily impacted ski slopes.     

浙江金华北山石生藓类分布与环境关系的排序分析

采用样方法调查了浙江金华北山石生环境30个样点167个样方,共记录86种,其中,丛藓科(Pottiaceae)、青藓科(B rachythec iaceae)、羽藓科(Thu id iaceae)和灰藓科(Hypnaceae)为4个大科,含的种数分别为11、11、10和8种。含种数较多的属为真藓属(Bryum)、凤尾藓属(F issidens)和青藓属(Brachythecium),分别含有7、7和6种。对86种藓类植物分布与环境关系的典范对应分析表明,海拔高度、水分条件和光照强度是影响金华北山石生藓类分布的主要环境因素。海拔决定藓类植被的类型,进而影响光照、岩表温度和水分条件。石面光洁度对石生藓类分布也有一定的影响,而石面坡度与其分布没有显著的相关性。