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1.
The structures and stabilities of eleven N13
+ and N13
– isomers have been investigated with second-order Møller–Plesset (MP2) and density functional theory (DFT) methods. Five N13
+ isomers and six N13
– isomers are all reasonable local minima on their potential energy hypersurfaces. The most stable N13
+ cation is structure C-2 with C2v symmetry, which contains a pentazole ring and two N4 open chains. It is different from those of the N7
+ and N9
+ clusters, but similar to the N11
+ cluster. Meanwhile, the most stable N13
– structure A-2 is composed of a pentazole ring and a six-membered ring connected by two nitrogen atoms. It is not only different from those of the N7
– and N9
– clusters, but also from the N11
– cluster. The decomposition pathways of structures C-2 and A-2 were investigated at the B3LYP/(aug)-cc-pVDZ level. From the barrier heights of the structures C-2 and A-2 decomposition processes, it is suggested that C-2 is difficult to observe experimentally and A-2 may be observed as a short-lived species.
Figure Optimized geometrical parameters of N13
+ isomer C-2
相似文献
2.
V. E. Yurinskaya T. S. Goryachaya A. A. Rubashkin A. V. Shirokova A. A. Vereninov 《Cell and Tissue Biology》2010,4(5):457-463
The K+, Na+, and Cl− balance and K+ (Rb+) and 36Cl− fluxes in U937 cells induced to apoptosis by 0.2 or 1 μM staurosporine were studied using flame emission and radioisotope techniques. It is found that two-thirds of the total decrease in the amount of intracellular osmolytes in apoptotic cells is accounted for by monovalent ions and one-third consists of other intracellular osmolytes. A decrease in the amount of monovalent ions results from a decrease in the amount of K+ and Cl− and an increase in the Na+ content. The rate of 36Cl−, Rb+ (K+), and 22Na+ equilibration between cells and the medium was found to significantly exceed the rate of apoptotic change in the cellular ion content, which indicates that unidirectional influxes and effluxes during apoptosis may be considered as being in near balance. The drift of the ion flux balance in apoptosis caused by 0.2 μM staurosporine was found to be associated with the increased ouabain-resistant Rb+ (K+) channel influx and insignificantly altered the ouabain-sensitive pump influx. Severe apoptosis induced by 1 μM staurosporine is associated with reduced pump fluxes and slightly changed channel Rb+ (K+) fluxes. In apoptotic cells, the 1.4–1.8-fold decreased Cl− level is accompanied by a 1.2–1.6-fold decreased flux. 相似文献
3.
In two mountain ecosystems at the Alptal research site in central Switzerland, pulses of 15NO3 and 15NH4 were separately applied to trace deposited inorganic N. One forested and one litter meadow catchment, each approximately
1600 m2, were delimited by trenches in the Gleysols. K15NO3 was applied weekly or fortnightly over one year with a backpack sprayer, thus labelling the atmospheric nitrate deposition.
After the sampling and a one-year break, 15NH4Cl was applied as a second one-year pulse, followed by a second sampling campaign. Trees (needles, branches and bole wood),
ground vegetation, litter layer and soil (LF, A and B horizon) were sampled at the end of each labelling period. Extractable
inorganic N, microbial N, and immobilised soil N were analysed in the LF and A horizons. During the whole labelling period,
the runoff water was sampled as well. Most of the added tracer remained in both ecosystems. More NO3− than NH4+ tracer was retained, especially in the forest. The highest recovery was in the soil, mainly in the organic horizon, and in
the ground vegetation, especially in the mosses. Event-based runoff analyses showed an immediate response of 15NO3− in runoff, with sharp 15N peaks corresponding to discharge peaks. NO3− leaching showed a clear seasonal pattern, being highest in spring during snowmelt. The high capacity of N retention in these
ecosystems leads to the assumption that deposited N accumulates in the soil organic matter, causing a progressive decline
of its C:N ratio. 相似文献
4.
The molecular weight and subunit composition of Cl-,HCO3(-)- and picrotoxin-stimulated Mg2+-ATPase from rat brain plasma membrane solubilized in sodium deoxycholate were studied by gel filtration chromatography. The enzyme activity eluted from a Sephacryl S-300 column in a single peak associated with a protein of molecular weight approximately 300 kD and a Stokes radius of 5.4 nm. The enzyme-enriched fraction, concentrated and denatured by SDS, migrated through a Sephacryl S-200 column as three peaks with molecular weights of approximately 57, 53, and 45 kD. SDS-PAGE also showed three major protein bands with molecular weights of about 57, 53, and 48 kD. The molecular weight and subunit composition of the Cl- and HCO3(-)-stimulated Mg2+-ATPase from neuronal membrane of rat brain are similar with the molecular properties of GABA(A)-benzodiazepine receptor complex from mammalian brain but are different from those of P-type transport ATPases. 相似文献
5.
6.
Massive anthropogenic acceleration of the global nitrogen (N) cycle has stimulated interest in understanding the fate of excess
N loading to aquatic ecosystems. Nitrate (NO3
−) is traditionally thought to be removed mainly by microbial respiratory denitrification coupled to carbon (C) oxidation,
or through biomass assimilation. Alternatively, chemolithoautotrophic bacterial metabolism may remove NO3
− by coupling its reduction with the oxidation of sulfide to sulfate (SO4
2−). The NO3
− may be reduced to N2 or to NH4
+, a form of dissimilatory nitrate reduction to ammonium (DNRA). The objectives of this study were to investigate the importance
of S oxidation as a NO3
− removal process across diverse freshwater streams, lakes, and wetlands in southwestern Michigan (USA). Simultaneous NO3
− removal and SO4
2− production were observed in situ using modified “push-pull” methods in nine streams, nine wetlands, and three lakes. The
measured SO4
2− production can account for a significant fraction (25–40%) of the overall NO3
− removal. Addition of 15NO3
− and measurement of 15NH4
+ production using the push–pull method revealed that DNRA was a potentially important process of NO3
− removal, particularly in wetland sediments. Enrichment cultures suggest that Thiomicrospira denitrificans may be one of the organisms responsible for this metabolism. These results indicate that NO3
−-driven SO4
2− production could be widespread and biogeochemically important in freshwater sediments. Removal of NO3
− by DNRA may not ameliorate problems such as eutrophication because the N remains bio-available. Additionally, if sulfur (S)
pollution enhances NO3
− removal in freshwaters, then controls on N processing in landscapes subject to S and N pollution are more complex than previously
appreciated.
Electronic supplementary material The online version of this article (doi:) contains supplementary material, which is available to authorized users. 相似文献
7.
S. A. Menzikov O. V. Menzikova 《Journal of Evolutionary Biochemistry and Physiology》2007,43(3):295-304
Action of Cl? + HCO3 ?1 ions on Mg2+-ATPase from brain plasma membranes of fish and rats has been studied. Maximal effect of the anions on the “basal” Mg2+-ATPase activity is revealed in the presence of 10 mM Cl? and 3 mM HCO3 ?1 at physiological values of pH of incubation medium. The studied Cl?, HCO3 ?-activated Mg2+-ATPases of both animal species, by their sensitivity to SH-reagents (5,5-dithio-bis-nitrobenzoic acid, N-ethylmaleimide), oligomycin, and orthovanadate, are similar to transport ATPase of the P-type, but differ from them by molecular properties and by sensitivity to ligands of GABAA-receptors. It has been established that the sensitive to GABAA-ergic ligands, Cl?, HCO3 ?-activated Mg2+-ATPase from brain of the both animal species is protein of molecular mass around 300 kDa and of Stock’s radius 5.4 nm. In fish the enzyme is composed of one major unit of molecular mass approximately 56 kDa, while in rats-of three subunits of molecular masses about 57, 53, and 45 kDa. A functional and structural coupling of the ATP-hydrolyzing areas of the studied enzyme to sites of binding of GABAA-receptor ligands is suggested. 相似文献
8.
V. A. Belyaev D. A. Kozlov A. A. Terent’ev A. E. Trenin 《Plasma Physics Reports》2017,43(10):1039-1041
A method for determining the lifetime of unstable ions is described. The method is based on measuring the decrease in the ion beam current onto a fixed detector with increasing path length of the ion beam from the ion source to the detector. The measurements performed for D? 2 and HD? molecular ions have shown that their lifetimes are 3.5 ± 0.1 and 4.4 ± 0.1 μs, respectively. 相似文献
9.
A confined aquifer in the Malm Karst of the Franconian Alb, South Germany was investigated in order to understand the role of the vadose zone in denitrifiaction processes. The concentrations of chemical tracers Sr2+ and Cl– and concentrations of stable isotope 18O were measured in spring water and precipitation during storm events. Based on these measurements a conceptual model for runoff was constructed. The results indicate that pre-event water, already stored in the system at the beginning of the event, flows downslope on vertical and lateral preferential flow paths. Chemical tracers used in a mixing model for hydrograph separation have shown that the pre-event water contribution is up to 30%. Applying this information to a conceptual runoff generation model, the values of 15N and 18O in nitrate could be calculated. Field observations showed the occurence of significant microbial denitrification processes above the soil/bedrock interface before nitrate percolates through to the deeper horizon of the vadose zone. The source of nitrate could be determined and denitrification processes were calculated. Assuming that the nitrate reduction follows a Rayleigh process one could approximate a nitrate input concentration of about 170 mg/l and a residual nitrate concentration of only about 15%. The results of the chemical and isotopic tracers postulate fertilizers as nitrate source with some influence of atmospheric nitrate. The combined application of hydrograph separation and determination of isotope values in 15N and 18O of nitrate lead to an improved understanding of microbial processes (nitrification, denitrification) in dynamic systems. 相似文献
10.
Marie Franҫoise Seck-Mbengue Anja Müller Benard Ngwene Elke Neumann Eckhard George 《Symbiosis (Philadelphia, Pa.)》2017,73(3):191-200
We investigated the effect of mineral nitrogen forms on transfer of nitrogen (N) and zinc (Zn) from attached compartments to rhodes grass (Chloris gayana) colonised with arbuscular mycorrhizal fungi (AMF). After being pre-cultivated in substrates with adequate nutrient supply and either AMF inoculated (+AM) or left non-inoculated (?AM), rhodes grass was positioned adjacent to an outer compartment holding a similar substrate but applied with labelled nitrogen (15N) either as ammonium (NH4 +) or nitrate (NO3 ?), and a high supply of Zn (150 mg kg?1 DS). Plant roots together with fungal mycelium were either allowed to explore the outer compartment (with root access) or only mycorrhizal hyphae were allowed (without root access). Within each access treatment, biomasses of rhodes grass were not significantly affected by AMF inoculation or N form. AMF contribution to plant 15N uptake was about double in NH4 + compared with NO3 ?-supplied treatments while the mycorrhizal influence on plant Zn uptake was insignificant. Without root access, the shoot 15N/Zn concentration ratio was up to ten-fold higher in +AM than –AM treatments and this ratio increase was clearly more pronounced in NH4 + than NO3 ?-supplied treatments. In conclusion, rhodes grass in symbiosis with the tested AMF acquired more N when supplied with ammonium. Moreover, there is clear indication that although the AMF have transported both nutrients (N and Zn), N was preferentially transferred as compared to Zn. We confirmed that, while rhodes grass is not able to prevent excessive Zn uptake via roots under conditions of high Zn, mycorrhiza is able to avoid excessive Zn supply to the host plant when the fungus alone has access to contaminated patches. 相似文献
11.
Based on the difference in the CD14 and CD16 expression, two subsets of monocytes were identified in human and other mammalian
blood. These subsets have different patterns of adhesion molecules and chemokine receptors that suggests the different mode
of their interaction with endothelium and tissue traffic. Here, we investigated the ability of CD14+CD16+ and CD14++CD16− monocytes to adhere to endothelial cell monolayer in presence or absence of pro- and anti-inflammatory cytokines. We demonstrated
that CD14+CD16+ monocytes had a higher level of adhesion to intact monolayer of endothelial cells than CD14++CD16− monocytes. Adhesion of CD14++CD16− and CD14+CD16+ monocytes significantly increased in the presence of TNFα or its combination with other cytokines. IFNγ and IL-4 alone did
not affect the adhesion of monocytes. These results show that CD14++CD16− and CD14+CD16+ monocytes can be recruited to the inflamed endothelium, but CD14+CD16+ monocytes adhere to endothelial cells without inflammations twice as strongly as CD14++CD16− monocytes. 相似文献
12.
The extent of anoxic depolarization (AD), the initial electrophysiological event during ischemia, determines the degree of brain region–specific neuronal damage. Neurons in higher brain regions exhibiting nonreversible, strong AD are more susceptible to ischemic injury as compared to cells in lower brain regions that exhibit reversible, weak AD. While the contrasting ADs in different brain regions in response to oxygen–glucose deprivation (OGD) is well established, the mechanism leading to such differences is not clear. Here we use computational modeling to elucidate the mechanism behind the brain region–specific recovery from AD. Our extended Hodgkin–Huxley (HH) framework consisting of neural spiking dynamics, processes of ion accumulation, and ion homeostatic mechanisms unveils that glial–vascular K+ clearance and Na+/K+–exchange pumps are key to the cell’s recovery from AD. Our phase space analysis reveals that the large extracellular space in the upper brain regions leads to impaired Na+/K+–exchange pumps so that they function at lower than normal capacity and are unable to bring the cell out of AD after oxygen and glucose is restored. 相似文献
13.
14.
Rüdiger Ettrich Milan Melichercik Jan Teisinger Olga Ettrichova Rita Krumscheid Katerina Hofbauerova Peter Kvasnicka Wilhelm Schoner Evzen Amler 《Journal of molecular modeling》2001,7(6):184-192
Homology modeling of the complete structure of the large cytoplasmic loop between the fourth and fifth transmembrane segments (H4–H5 loop) of the subunit of Na+/K+-ATPase is reported. The deduced amino acid sequence shows high sequence identity and homology to the Ca2+-ATPase (32.8% identity and 53.3% similarity in our alignment), whose tertiary structure has been solved recently at 2.6-Å resolution by X-ray crystallography. This high homology allowed the construction of a model structure using the MODELLER program. Refinement was achieved through interactive visual and algorithmic analysis and minimization with the TRIPOS force field included in the SYBYL/MAXIMIN2 module. The docking of ATP as a substrate into the active site of the model was explored with the AUTODOCK program followed by molecular mechanics optimization of the most interesting complexes. Thus, the docking of ATP into the resulting model of the H4–H5 loop gave evidence for the existence of one ATP binding site only. We were able to specify Cys549, Phe548, Glu505, Lys501, Gln482, Lys480, Ser477, Phe475 and Glu446 as parts of the ATP binding site with Lys501 located in the depth of the positively charged binding pocket.Electronic Supplementary Material available. 相似文献
15.
M. A. Breygina N. P. Matveyeva D. S. Andreyuk I. P. Yermakov 《Russian Journal of Developmental Biology》2012,43(2):85-93
We studied the possibility of K+ and Cl− efflux from tobacco pollen grains during their activation in vitro or on the stigma of a pistil. For this purpose the X-ray
microanalysis and spectrofluorometry were applied. We found that the relative content of potassium and chlorine in the microvolume
of pollen grain decreases during its hydration and activation on stigma. Efflux of these ions was found both in vivo and in
vitro. In model in vitro experiments anion channel inhibitor NPPB ((5-nitro-2-(3-phenylpropylamino) benzoic acid) in the concentration
that was blocking pollen germination, reduced Cl− efflux; potassium channel inhibitor TEA (tetraethylammonium chloride) partially reduced K+ efflux and lowered the percent of activated cells. Another blocker of potassium channels Ba2+ caused severe decrease in cell volume and blocked the activation. In general, the obtained data demonstrates that the initiation
of pollen germination both in vivo and in vitro involves the activation of K+ and Cl− release. An important role in these processes is played by NPPB-, TEA- and Ba2+-sensitive plasmalemma ion channels. 相似文献
16.
The Na+/Mg2+ exchanger represents the main Mg2+ extrusion mechanism operating in mammalian cells including hepatocytes. We have previously reported that this exchanger, located in the basolateral domain of the hepatocyte, promotes the extrusion of intravesicular trapped Mg2+ for extravesicular Na+ with ratio 1. This electrogenic exchange is supported by the accumulation of tetraphenyl-phosphonium within the vesicles at the time when Mg2+ efflux occurs. In this present study, the role of extra- and intra-vesicular Cl? on the Na+/Mg2+ exchange ratio was investigated. The results reported here suggest that Cl? ions are not required for the Na+ to Mg2+ exchange to occur, but the stoichiometry ratio of the exchanger switches from electrogenic (1Na in + :1 Mg out 2+ ) in the presence of intravesicular Cl? to electroneutral (2Na in + :1 Mg out 2+ ) in their absence. In basolateral liver plasma membrane vesicles loaded with MgCl2 labeled with 36Cl?, a small but significant Cl? efflux (~30 nmol Cl?/mg protein/1 min) is observed following addition of NaCl or Na-isethionate to the extravesicular medium. Both Cl? and Mg2+ effluxes are inhibited by imipramine but not by amiloride, DIDS, niflumic acid, bumetanide, or furosemide. In vesicles loaded with Mg-gluconate and stimulated by Na-isethionate, an electroneutral Mg2+ extrusion is observed. Taken together, these results suggest that the Na+/Mg2+ exchanger can operate irrespective of the absence or the presence of Cl? in the extracellular or intracellular environment. Changes in trans-cellular Cl? content, however, can affect the modus operandi of the Na+/Mg2+ exchanger, and consequently impact cellular Na+ and Mg2+ homeostasis as well as the hepatocyte membrane potential. 相似文献
17.
We report on the transformation and expression in sugar beet (Beta vulgaris) hairy roots of a Nicotiana alata NaPI gene encoding a serine proteinase inhibitor (PI) that has been shown to effectively reduce the population of a number of
insect pests. Using in-gel analysis, two PI protein activities were detected at approximately 24- and/or 28-kDa in hairy roots
generated via Agrobacterium rhizogenes-mediated gene transfer. Immunoblot analysis revealed the presence of the expected ~40 kDa precursor, and in some transformants,
a ~20 kDa processing intermediate and the mature 6-kDa PIs. In general, processing of the precursor in the clonal lines was
reduced or not detected. The reduced efficiency of post-translational processing of the N. alata PI precursor may be attributed to modification and/or altered folding of the recombinant protein or distinct post-translational
machinery functioning in sugar beet hairy roots and Nicotiana.
Disclaimer: Mention and/or use of a commercial or proprietary product to the exclusion of others does not constitute endorsement
by the USDA. 相似文献
18.
Sulman T Katsnelson LB Solovyova O Markhasin VS 《Bulletin of mathematical biology》2008,70(3):910-949
A mathematical model of the cardiomyocyte electromechanical function is used to study contribution of mechanical factors to
rhythm disturbances in the case of the cardiomyocyte calcium overload. Particular attention is paid to the overload caused
by diminished activity of the sodium-potassium pump. It is shown in the framework of the model, where mechano-calcium feedback
is accounted for that myocardium mechanics may significantly enhance arrhythmogenicity of the calcium overload. Specifically,
a role of cross-bridge attachment/detachment processes, a role of mechanical conditions of myocardium contractions (length,
load), and a role of myocardium viscosity in the case of simulated calcium overload have been revealed. Underlying mechanisms
are analyzed. Several approaches are designed in the model and compared to each other for recovery of the valid myocardium
electrical and mechanical performance in the case of the partially suppressed sodium-potassium pump. 相似文献
19.
Tomoya Kitayama 《Neurochemical research》2018,43(1):101-106
The pain sensory system normally functions under a fine balance between excitation and inhibition. When this balance is perturbed for some reason, it leads to neuropathic pain. There is accumulating evidence that attributes this pain generation to specific dysfunctions of the inhibitory system in the spinal cord. One possible mechanism leading to the induction of these dysfunctions is the down-regulation of K+-Cl?-cotransporter-2 (KCC2) expression. In fact, various neuropathic pain models indicate a decrease of KCC2 expression in the spinal cord. The alteration of KCC2 expression affects GABAergic and glycinergic neurotransmissions, because KCC2 is a potassium-chloride exporter and serves to maintain intracellular chloride concentration. When there is a low level of KCC2 expression, GABAergic and glycinergic neurotransmissions transform from inhibitory signals to excitatory signals. In this review, the hypothesis that an alteration of KCC2 expression has a crucial influence on the initiation/development or maintenance of neuropathic pain is discussed. In addition, it is suggested that the alteration of inhibitory signals is dependent on the time after peripheral nerve injury. 相似文献
20.
Min-Hwang Chang Consuelo Plata Kambiz Zandi-Nejad Aleksandra Sinđić Caroline R. Sussman Adriana Mercado Vadjista Broumand Viswanathan Raghuram David B. Mount Michael F. Romero 《The Journal of membrane biology》2009,228(3):125-140
The SLC26 gene family encodes anion transporters with diverse functional attributes: (a) anion exchanger, (b) anion sensor,
and (c) anion conductance (likely channel). We have cloned and studied Slc26a9, a paralogue expressed mostly in lung and stomach.
Immunohistochemistry shows that Slc26a9 is present at apical and intracellular membranes of lung and stomach epithelia. Using
expression in Xenopus laevis oocytes and ion-sensitive microelectrodes, we discovered that Slc26a9 has a novel function not found in any other Slc26 proteins:
cation coupling. Intracellular pH and voltage measurements show that Slc26a9 is a nCl−-HCO3− exchanger, suggesting roles in gastric HCl secretion or pulmonary HCO3− secretion; Na+ electrodes and uptakes reveal that Slc26a9 has a cation dependence. Single-channel measurements indicate that Slc26a9 displays
discrete open and closed states. These experiments show that Slc26a9 has three discrete physiological modes: nCl−-HCO3− exchanger, Cl− channel, and Na+-anion cotransporter. Thus, the Slc26a9 transporter channel is uniquely suited for dynamic and tissue-specific physiology
or regulation in epithelial tissues.
Min-Hwang Chang, Consuelo Plata, and Kambiz Zandi-Nejad have contributed equally to this work. 相似文献