银鲫两个雌核发育克隆间两性生殖子代的遗传多样性分析

本研究在揭示银鲫两性生殖方式的基础上,对以一尾人工雌核发育克隆F的卵子与一尾天然雌核发育克隆D的精子授精所获得的18尾FD后代及其亲本进行RAPD分析.扩增结果表明,在18尾FD子代中可检测到丰富的DNA多态片段,这些多态片段来自于银鲫两性生殖的重组.FD子代的扩增图谱不仅与母本的扩增图谱不同,而且个体间的扩增图谱也存在着较大的差异.这些差异的DNA片段根据其来源可基本分为四类.与异精刺激雌核发育的子代的情况不同,两性生殖FD子代间平均遗传距离高达0.23±O.123,远远高于异精刺激雌核发育的子代间的平均遗传距离(约＜0.01).在FD的三类表型中,SD个体间的平均遗传距离最大,为0.235±0.097;其次是SF间的平均遗传距离,为0.148±0.073;而NL间的平均遗传距离最小,为0.094±0.083.银鲫的遗传多样性和两性生殖方式为银鲫种群提供了丰富的遗传变异,创造了更多的遗传多样性.在分析了2320条(平均每个个体116条)可分辨的扩增带的基础上,采用NJTREE构建了呈现FD个体间及其与亲本相似性的分支图.NL3与母本的相似度最高,SD3与父本的相似度最高.在FD三种类型中,SD与NL和SF的平均遗传距离较大(＞0.31),而NL和SF的平均遗传距离仅为0.124.母本与父本的遗传距离约为0.35,与以前的研究结果类似,而FD 18尾个体与父母本的平均遗传距离均约为O.32,基本一致.但将18尾个体按体型分别统计平均遗传距离,不同的体型与父母本的相似性存在着较大差别.母本与SF的相似率最高,约为71%;父本与SD的相似率最高,约为70%.这可能由于扩增出一些与表型相关的DNA片段,从而导致了FD三种类型与亲本的相似性与表型相关.银鲫具有两种生殖方式的揭示将为解决长期困惑进化遗传学家的难题寻找到一个新的突破口,也进一步确立了银鲫在单性脊椎动物和多倍体脊椎动物进化遗传学研究中的特殊意义.     

银鲫两个雌核发育克隆间两性生殖子代的遗传多样性分析

Based on the discovery of gonochoristic reproductive mode in silver crucian carp (Carassius auratus gibelio), 18 individuals from the mated offspring between clone F and clone D and their parents were analyzed using 11 RAPD primers. The mated offspring differentiated into three phenotypes. One phenotype is similar to that of clone F (SF). The second is similar to that of clone D (SD). The third shows a novel longer and thinner body type (NL). Electrophoretogram results show abundant polymorhic DNA fragments among individuals in the FD mated offspring. Obviously, the polymorphic DNA fragments originate from the genome recombination owing to the gonochoristic reproductive mode. The FD mated offspring amplify different fingerprints from maternal, and their fingerprints are different from each other. These different DNA fragments can be divided into four groups according to their origin. The average genetic distance among individuals from the FD offspring (0.23 +/- 0.123) is much higher than that of allogynogenetic offspring, which is only about 0.01. Of the three phenotypes in the FD offspring, the average distances among SD is the highest (0.235 +/- 0.097). The next is SF phenotype, in which the average distances is 0.148 +/- 0.073. The average distances among NL is the lowest (0.094 +/- 0.083). The gonochoristic reproductive mode introduces high genotypic variability and underlines genetic diversity. A dendrogram was constructed by NJTREE cluster analysis based on a total of 2320 distinguishable fragments (116 per individual). NL3 and maternal are most closely related, and SD3 and paternal are most closely related. The average genetic distances between SD and SF or NL (> 0.31) is higher than that of between SF and NL (0.124). Consistent with previous study, the genetic distance between maternal and paternal is 0.35. The average genetic distances between FD offspring and parents are both about 0. 32. But the similarities among the three phenotypes in mated group FD offspring and parents are different. The similarity between SF and maternal (71%) is higher than similarities among other phenotypes and maternal. The similarity between SD and paternal (70%) is higher than similarities among other phenotypes and paternal. The results suggest the similarities among three phenotypes in the FD offspring and parents are related with their phenotypes because some DNA fragments specific for phenotypes were amplified in this study. The revelation about reproductive diversity will be able to open the door in which complicated mechanism has been locked in unisexual organisms for long time, and establish the important roles of silver crucian carp in the studies on evolutionary genetics in unisexual or polyploid vertebrates.     

雌核发育银鲫微卫星突变速率和突变模式

银鲫是天然雌核发育的三倍体两性型种群, 因其遗传背景和生殖方式的特殊性, 已经成为研究单性和多倍体脊椎动物进化遗传学的理想模式鱼类。利用33个微卫星序列对雌核发育银鲫的突变速率和突变模式进行研究, 结果表明: (1) 22个子代个体中, 检测到1尾个体在15个微卫星位点具有18个突变等位基因; (2) 每个微卫星位点每代总体平均突变率是1.16×10-2, 95%置信区间是6.87×10-3~1.83×10-2, 与其他鱼类相比, 雌核发育银鲫的突变率明显偏高, 这与天然雌核发育鱼类处在单性生殖和两性生殖的过度阶段有密切关系; (3) 具有突变等位基因的13个位点的重复单元数目都在10次以上, 11个复合型微卫星位点的突变率(1.31×10-2)与21个完美型位点(1.00×10-2)的突变率没有明显差异(P = 0.67), 微卫星突变率受到重复单元数目的影响, 然而与重复结构类型和侧翼序列GC碱基含量无相关性; (4) 序列分析表明, 雌核发育银鲫的微卫星突变模式并不严格遵守逐步突变模型。     

雌核发育银鲫的受精生物学研究——天然雌核发育银鲫繁殖方式的讨论

本文研究了同源雌核发育银鲫精子在4种类型的雌核发育银鲫卵中的发育特征。初步揭示了天然雌核发育银鲫根据精子的来源不同而分别具有二种不同的繁殖方式,对其在维持雌核发育银鲫种群生存,促使克隆分化等方面的独特的生物学意义进行了讨论。     

银鲫不同雌核发育系的生物学特性比较研究

银鲫不同雌核发育系间,以D系银鲫体型最高,其相对体高平均为47％,A系为44.4％,C系为43.7％,B系为41.7％。在生长速度方面以D系生长最快,其次为A系,这两个系的银鲫在含肉量与肌肉蛋白质含量上均无明显差异,但D系银鲫对饵料的利用效率明显高于A系,因此生产上养殖以D系银鲫为母本,红鲤为父本人工繁殖而成的高体型异育银鲫,可提高经济效益10—20％。银鲫4个雌核发育系的卵巢发育进程不同,D系卵母细胞在2月份有个迅速发育期,因而最早进入成熟产卵期。A系成熟产卵期略晚,C系成熟产卵期较迟。银鲫染色体数目存在系间差异,D系染色体数目为162,A系和C系为156。     

组织移植对银鲫不同雌核发育系的遗传监测

采用脾移植实验对银鲫3个不同的雌核发育系进行了遗传分析。在3个同系移植的组合中,移植物被接受的个体数平均达95%,表明同一雌核发育系的大多数个体具有一致的基因型。在不同雌核发育系间的移植,移植物在7—14天被排斥(21—30℃)。从而用组织移植证明这些雌核发育系是存在的,并与遗传标记所鉴别的结果一致。文中对同系移植中出现少数排斥现象的原因进行了讨论。       

雌核发育银鲫和两性融合彩鲫卵母细胞体外诱导成熟过程中周期蛋白 …

采用体外诱导卵母细胞成熟技术,比较研究了雌核发育银鲫和两性融合发育彩鲫卵母细胞成熟过程中周期蛋白合成和ＭＰＦ活性变化情况。结果表明：１７α,２０β－二氢孕酮（简称ＤＰ）浓度为０．５μｇ／ｍｌ,温度为２４℃,光照时间２０小时为最适诱导条件。在相同条件下,两性生殖彩鲫卵母细胞体外诱导成熟速度明显快于银鲫。相应的细胞学研究表明,在体外诱导时,银鲫和彩鲫卵母细胞的发育成熟是正常的。银鲫卵母细胞生发泡破裂（     

雌核发育银鲫子代中微卫星特异序列分析

雌核发育个体的基因型基本上完全与母本相同,这是源于卵子发生过程中没有经过减数分裂.父本的遗传物质是在随机水平、亚基因组水平或基因组水平参与到子代的遗传重组过程,从而对长期突变积累的雌核发育生物基因组进行补偿,一直是遗传学家关注的问题.本文对雌核发育银鲫特异个体及父母本5个微卫星位点的扩增条带进行了克隆测序,相似性比对结果显示,特异个体所表现的父咎匾霥NA条带,序列结果与父本完全相同或相似(SCM4、SCM9、YJ5),并在某些位点上保留了母本的特异条带(YJ5),而个体本身特异的DNA条带与父母本的相似性均较高(SCM13).同时,所检测到的个体经越冬后查验为雌性个体,进一步进行同源繁育,研究变异条带在繁殖中的命运.连续2代的繁育检测结果表明,融合了父本特异性条带的银鲫个体在繁殖过程中仍行雌核发育的生殖方式,变异来的条带能够传递给子代,进一步证实同源雌核发育银鲫通过小概率两性融合事件丰富银鲫种群的遗传多样性[动物学报 53(3):537-544,2007].     

Genetic Evidence for Gonochoristic Reproduction in Gynogenetic Silver Crucian Carp (Carassius auratus gibelio Bloch) as Revealed by RAPD Assays

Sex evolution has been a debating focus in evolutionary genetics. In lower vertebrates of reptiles, amphibians, and fish, a species or a bioform reproduces either sexually or asexually but never both. A few species were found to consist of all females in fish. These all-female species can propagate by asexual reproduction modes, such as gynogenesis and hybridogenesis. However, the coexistence of sexuality and asexuality in a single species was recently noted only in a cyprinid fish silver crucian carp, Carassius auratus gibelio. This fish had been demonstrated to be capable of gynogenesis stimulated by sperm from other related species. Surprisingly, natural populations of this fish consist of a minor but significant portion (approx. 20%) of males. As different clones with specific phenotypic and genetic characteristics have been found, and RAPD markers specific to each clone have recently been identified, this fish offers many advantages for analyzing whether or not genetic recombination occurs between different clones. In this study, artificial propagation was performed in clone F and clone D. Ovulated eggs from clone F were divided into two parts and respectively inseminated with sperm from a clone D male and from a red common carp (Cyprinus carpio) male. The control clone D individuals were selected from gynogenetic offspring of clone D activated by sperm of red common carp. The phenotype and sex ratio in the experimental groups were also observed. Using RAPD molecular markers, which allow for reliable discrimination and genetic analysis of different clones, we have revealed direct molecular evidence for gonochoristic reproduction in the gynogenetic silver crucian carp and confirmed a previous hypothesis that the silver crucian carp might reproduce both gynogenetically and gonochoristically. Therefore, we conclude that the silver crucian carp possesses two reproductive modes, i.e., gynogenetic and gonochoristic reproduction. The response mechanism of two reproductive development modes may be the first discovery in vertebrates. Additionally, we discuss the evolutionary implication between gynogenetic and gonochoristic reproduction modes and the contribution of the minor proportion of males to genetic flexibility in the gynogenetic silver crucian carp. Received: 5 January 2000 / Accepted: 3 August 2000     

Genetic Diversity among Different Clones of the Gynogenetic Silver Crucian Carp, Carassius auratus gibelio, Revealed by Transferrin and Isozyme Markers

Genetic diversity among four clones (A, D, E, F) of gynogenetic silver crucian carp was studied using transferrin and isozymes in the blood as markers. Of the five proteins investigated, three (transferrin, esterase and superoxide dismutase) indicated polymorphism and eight polymorphic loci were detected. These loci were probably encoded by codominant alleles and their inheritance patterns were analyzed. Intraclonal homogeneity and interclonal heterogeneity were observed in these clones, which allowed us to infer the clonal nature and evolutionary relationship between them. Clonal diversity in this population of silver crucian carp in China was also compared with data reported from gynogenetic crucian carp in Germany.     

彭泽鲫两个雌核发育克隆的染色体组型分析

采用PHA和秋水仙素体内注射法直接制作肾细胞染色体标本,对彭泽鲫种群内两个不同雌核发育克隆的亲本进行染色体数目及组型分析。结果表明,彭泽鲫种群内的两个不同克隆存在染色体数目及组型差异,其中克隆H包含6条超数染色体在内的染色体众数是156,150条基本染色体的组型公式为：42M 36SM 39ST 33T,NF=228;克隆L包含12条超数染色体在内的染色体众数是162,150条基本染色体的组型公式为：36M 45SM 33ST 36T,NF=231。两个不同雌核发育克隆的发现及其染色体的差异说明彭泽鲫种群内同样存在着类似银鲫种群内的遗传多样性。     

水稻一多拷贝微卫星DNA多态性分析

用一个多拷贝微卫星 DNA标记分析了238份栽培水稻的遗传多样性及遗传多样性从农家品种到现代栽培品种的动态变化。共检测出16种长度变异类型和32种表现型,但长度变异类型数、表现型数和表现型多样性水平在农家品种和现代栽培品种间没有显著差别。该标记在遗传资源评价和DNA指纹图谱建设中有重要的应用价值,也是研究环境或人工对多拷贝基因选择作用的一个良好模型。 Abstract:The genetic diversity of 238 cultivated rice and its difference between landraces and modern cultivars have been assayed using a multiple copy microsatellite DNA marker.Although 16 length variants and 32 phenotypes were found in all accessions,no significant differences in number of length variants,number of phenotypes and phenotypic diversity were detected between landraces and modern cultivars.This marker is of great value in evaluating genetic germplasm and constructing DNA fingerprints of rice and provides an elite model for tracing effectiveness of natural and artificial selection on multiple copy genes.     

银鲫apelin基因的克隆、组织表达谱和摄食关系的初步研究

apelin是一种参与哺乳动物和鱼类摄食调控的重要神经肽。为了更好地研究apelin在银鲫(Carassius auratus gibelio)上的摄食调控作用,本试验采用RACE技术首次获得了银鲫apelin的cDNA全长序列,并通过实时荧光定量PCR(RT-PCR)技术检测了apelin基因在各组织的表达情况以及餐前餐后和禁食对其表达量的影响。结果显示银鲫apelin全长cDNA序列长度为1082 bp,其中5’非编码区(5’-UTR)的长度为114 bp,3’非编码区(3’-UTR)的长度为734 bp,开放阅读框(open reading frame,ORF)的长度为234 bp。银鲫apelin基因的ORF区编码77个氨基酸,前22个氨基酸为信号肽。apelin基因在银鲫21个组织中普遍表达,特别是在下丘脑中表达量最高。在餐前餐后的试验中,银鲫下丘脑apelin基因在餐后表达量显著下降(p<0.05);在禁食试验中,禁食组下丘脑apelin基因的表达量在第5天显著升高(p<0.05),第7天极显著升高(p<0.01),复投喂后,apelin基因的表达量在第9天、第11天、第14天极显著降低(p<0.01)。综上所述,apelin基因可能是银鲫的诱食因子,在其摄食调控起到一定的作用。     

Genetic Diversity in Crucian Carp (Carassius auratus)

A survey of restriction fragment polymorphism in mitochondrial DNA of three subspecies of Carassius auratus throughout four provinces in China was undertaken using 17 restriction enzymes. Two carp, Cyprinus carpio rubbrofuscus and Cyprinus carpio carpio, were included as the outgroup. A total of 16 haplotypes was observed: 5 in tetraploids of C. auratus auratus; 8 in hexaploids of C. auratus auratus; and 2 in C. auratus gibelio and C. auratus cuvieri, respectively. The tetraploids and hexaploids share three common haplotypes as I, V, and VI. C. a. Cuvieri may have diverged first among the three subspecies. Interestingly, C. a. auratus and C. a. cuvieri did not form monophyletic clades, which indicated that the classification of Carassius auratus required further studies. The current hypothesis, that hexaploids originated from tetraploids by a polyploidy event, is less favorable, based on the distribution of haplotypes and the lower diversity in tetraploids than in hexaploids. Our data also indicate that divergence of hexaploids and tetraploids might be recent and mtDNA polymorphism existed before the divergence. Meanwhile, genetic isolation exists between the hexaploids and the tetraploids.     

鲫鱼遗传多样性的初步研究

用１７种限制性内切酶对鲫属普通鲫鱼低背型,高背型,异育银鲫,日本白鲫及华南鲤的变种红鲤共１２４个个体的线粒体ＤＮＡ进行了ＲＦＬＰ分析,１４种酶具多态,共计４３种限制性态型,１１种单倍型。     

饥饿对银鲫血液组分和卵巢发育的影响

对银鲫 (Carassiusauratusgibelio)进行投喂、饥饿 (1～ 4周 )、饥饿投喂 (饥饿 2周再投喂 2周 )处理后 ,测定其血液组分和卵巢发育的指标。结果表明 :饥饿处理后银鲫血液中血糖、甘油三酯的含量显著降低 ;红细胞数量、血红蛋白含量和胆固醇含量先显著降低 ,随后回升到投喂组水平 ;在饥饿过程中白细胞的数量、红细胞的长短径、红细胞沉降率和总蛋白均无明显变化。饥饿投喂处理的银鲫血液中红细胞数量、甘油三酯和胆固醇含量与投喂组无差异 ,但血糖含量仍显著低于投喂组 ,而白细胞数和血红蛋白含量显著高于投喂组。饥饿 4周延缓了银鲫卵巢发育 ,其性腺成熟系数和卵径均显著低于投喂组 ;饥饿投喂组的性腺成熟系数和卵径仍显著低于投喂组。分析说明饥饿阻碍了银鲫的卵巢发育 ,而饥饿对银鲫血液组分的影响在再投喂后得到恢复。     

A Set of Polymorphic Trinucleotide and Tetranucleotide Microsatellite Markers for Silver Crucian Carp (Carassius auratus gibelio) and Cross-Amplification in Crucian Carp

Silver crucian carp (Carassius auratus gibelio Bloch), as a gynogenetic fish, is a promising model for the study of the evolutionary genetics of vertebrates. We have developed 59 polymorphic trinucleotide and tetranucleotide markers for the silver crucian carp through the biotin capture method and radioactive-labeling hybridization. The number of alleles ranged from 2 to 12 in the population, and the average proportion of heterozygotes (including tri- and diallelic) at polymorphic loci was 76.8%. In addition, these loci were successfully applied to a close relative, the crucian carp (Carassius auratus), by cross-amplification, as shown by the range of alleles (2–19), observed heterozygosity (0.1765–0.9706), expected heterozygosity (0.2392–0.9421), and polymorphism information content (0.2186–0.9236).     

鲫源迟缓爱德华氏菌的分离鉴定及其毒力基因的检测

【目的】探明上海某养殖场的异育银鲫(Carassius auratus gibelio)发生死亡的病因,研究致病菌分类地位和毒力基因携带情况。【方法】通过病原菌的筛查和回感试验,确定发病原因,对16S rRNA基因、gyrB和rpoB管家基因测序,建立病原菌系统进化树,结合API-32E细菌鉴定系统对菌株的生理生化进行鉴定,综合判定致病菌的种类及其分类地位;根据已报道的7个毒力基因fimA、citC、gadB、mukF、katB、esrB和sodB序列,设计引物进行PCR扩增,研究病原菌毒力基因携带情况。【结果】致病菌GY15是导致异育银鲫发病的原因,GY15的16S rRNA、gyrB和rpoB基因与已报道的迟缓爱德华氏菌(Edwardsiella tarda)相似性在99%以上,构建系统进化树和API鉴定确定该菌株为E.tarda,腹腔注射回感可导致异育银鲫死亡,半致死浓度(LD_(50))为4.26×105 CFU/m L;已报道的7种毒力基因在该致病菌中均能被检测到;药敏试验结果显示,该菌对恩诺沙星、氟苯尼考和氧氟沙星等15种药物敏感,对新霉素、四环素和复方新诺明等18种药物表现为耐药。【结论】首次报道E.tarda可感染异育银鲫,它对异育银鲫的养殖造成威胁。