Autoradiographic screening for potential heterotrophs in natural algal populations of Lake Kinneret

Microautoradiography was used to screen natural phytoplankton populations from Lake Kinneret for their ability to take up radioactive organic substrates (glucose, acetic acid, amino acids, and glycollic acid. Several of the important Chlorophyta (Pediastrum spp.,Actinastrum hantzschii, Kirchncriella spp.,Coelastrum spp.,Scenedesmus spp., andTetraëdron spp.) and Cyanophyta (Microcystis spp.,Merismopedia sp.,Chroococcus spp., andAnabaena spp.) showed consistent organic uptake. However, the principal bloom former, the dinoflagellatePeridinium cinctum fawestii and most of the pelagic algae observed, never assimilated any of the above substrates. Autoradiographic surveys permit rapid screening of algal populations for species which are capable of taking up organic matter and can indicate potential facultative heterotrophs.     

Secondary pollen types characteristic of Louisiana honeys

Nine secondary pollen types (those comprising 16–45% of the pollen sample) were recovered from 54 honey samples (10 g) collected from the major beekeeping areas of Louisiana. The pollen types in order of decreasing importance are:Berchemia scandens, rattan vine;Rubus spp., blackberry and dewberry;Salix spp., willow;Trifolium repens, white clover;Glycine max, soybean;Parthenocissus quinquefolia, Virginia creeper; Rosaceae, rose family;Cephalanthus occidentalis, buttonbush; andCornus spp., dogwood. The first four secondary types also appeared as dominant pollen (over 45%) in some of the Louisiana honey samples investigated and were previously reported. The remaining five pollen types and the “bee plants” associated with each pollen type are identified and described.     

Effect of fire on soil microorganisms in a meghalaya pine forest

The effect of man-made fire on soil mierobial population in a natural subtropical pine forest eco-system, was studied. A nearly fifty years old pine(Pinus kesiya Royle) forest was cut and burnt in March 1977. Another half of this pine forest was left uncut and unburnt. Microbial population was destroyed completely just after the burning and recolonization occurred after some days. Bacteria and actinomycetes were found to be the first colonizers followed by fungi. Burning initiated better growth and higher population of bacteria after two or three showers. Bacterial population was highest in July in burnt and in May in unburnt forest. Maximum fungal population in burnt site was recorded in July while it was highest in April and May in unburnt site.Penicillium spp.,Cladosporium sp. andTrichoderma sp. were found to be first colonizing fungi just after the burning. In unburnt forest eco-systemAbsidia sp.,Trichoderma sp.,Fusarium sp. andPenicillium spp. were found to be dominant.     

First observations on the parasitoids associated with lepidopterous pests of cotton in Burkina faso

A study was conducted in Burkina Faso from 1991 to 1994 on the parasitoids associated with the following lepidopterous pests of cotton:Helicoverpa armigera (Hübner),Earias spp.,Diparopsis watersi (Rothschild),Spodoptera littoralis (Boisduval),Syllepte derogata (F.) andAnomis flava (F.). Thirty-nine primary parasitoid species and ten secondary parasitoid species were collected. The mean annual parasitism rates were lower than 20%, except forS. derogata pupae (42.9%). Maximum weekly parasitism rates could be high, with 61.5% recorded forS. derogata pupae and 32.9% forH. armigera larvae. The highest parasitism rates were found forMeteorus laphygmarum Brues (Braconidae) onH. armigera, Xanthopimpla aliena Krieger (Ichneumonidae),Brachymeria olethria (Waterston) andB. citrea (Steffan) (Chalcididae) onS. derogata, Aleiodes dedivus (Szépligeti),Dolichogenidea sp. (Braconidae) andBrachymeria feae Masi onEarias spp., an unidentified Tachinidae onA. flava andMetopius discolor Tosquinet (Ichneumonidae) onS. littoralis. Secondary parasitoids are mainly associated withApanteles spp. (Braconidae) which parasitizeS. derogata larvae. Some species of these secondary parasitoids such asNesolynx phaeosoma (Waterston),Pedobius amaurocoelus (Waterston) (Eulophidae) andAphanogmus fijiensis (Ferrière) (Ceraphronidae) may also attack certain Braconidae or Chalcididae that are primary parasitoids of other lepidopterous pests.     

Identification of Actinomyces,Propionibacteria, Lactobacilli and Bifidobacteria by Amplified 16S rDNA Restriction Analysis

Amplified 16S rDNA restriction analysis (ARDRA) with Hae III and Hpa II was applied to 37 reference strains, 179 human clinical and four veterinary isolates of Propionibacterium, Lactobacillus andBifidobacterium and some other anaerobic, non-sporing, Gram-positive bacilli. Results were compared with those obtained by ARDRA for reference strains (26) and clinical isolates (469) of Actinomyces spp. Reference strains were clearly differentiated to species level. Clinical isolates of Propionibacterium and Lactobacillus were identified with confidence to species level. Bifidobacterium spp. were identified in ARDRA with confidence to genus, but anomalies in species level identification of some reference strains and clinical isolates may reflect unreliable identification in conventional tests. Isolates of Arcanobacterium spp., Actinobaculum schaalii, Eggerthella lenta, some Eubacterium spp., Gardnerella vaginalis, Mobiluncus spp., Atopobium vaginae, Abiotrophia defectiva, Streptococcus mutans, Streptococcus intermedius and Clostridium sp. were clearly differentiated in ARDRA. ARDRA is a simple, rapid, and highly discriminatory method for identification of anaerobic, non-sporing, Gram-positive bacilli.     

The use of yeast for microbial degradation of some selected mycotoxins

Several biodegradation experiments were carried out using 10 different yeast strains.Saccharomyces spp., Kluyveromyces spp. andRhodotorula spp. were tested for biodegradation of selected mycotoxins (ochratoxin A, nivalenol, deoxynivalenol and fumonisin B₁) standardsin vitro. There was confirmed that some yeast strains are able to degrade some mycotoxins. However, great differences between individual strains were observed. Moreover, 12Saccharomyces cerevisiae strains were tested for their potential capability to degrade zearalenone and fumonisins in Sabouraud broth. Two strains were capable to degrade zearalenone totally, one strain decreased the mycotoxin concentration up to 25%, and one strain up to 75% of original amount. Two strains were capable to degrade fumonisins partially.     

An Aeropalynological study of the Porto region (Portugal)

The annual airborne pollen variation of thePorto region was studied from November 2001 toOctober 2002 using a Cour type sampler. A totalof 170 × 10⁶ grains m^?2 belonging to63 taxa was observed. The vegetationsurrounding the sampling point includesornamental, non-ornamental trees, shrubs andherbaceous species. The main pollen types wereCupressaceae, Gramineae, Hamamelidaceae, Pinaceae,Urticaceae, Quercus spp.,Acer spp., Myrtaceae,Caryophyllaceae, Oleaceae,Betulaceae and Plantago spp. thatrepresented 88% of the Porto pollen spectrum.Gramineae, Cupressaceae,Myrtaceae, Oleaceae, Pinaceae andUrticaceae pollen are found throughoutthe year. Concerning total pollenconcentration, the distribution throughout theyear is very irregular, with several annualpeaks, with the maximum concentrationregistered between the end of March and thefirst two weeks of April and the lowestobserved during autumn.     

Hallucinogenic plants of the Shuar and related indigenous groups in Amazonian Ecuador and Peru

Banisteriopsis caapi, Brugmansia suaveolens, andNicotiana tabacum are the principal hallucinogens used by the Shuar and related ethnic groups in Amazonian Ecuador and Peru. These three species are common hallucinogens throughout northwestern Amazonia.Banisteriopsis caapi (natem) is the hallucinogen most frequently employed by the Shuar. The Shuar drink the juice ofN. tabacum duringnatem healing ceremonies. They also believe that smoke fromN. tabacum cigarettes repel evil spirits.Brugmansia suaveolens is the strongest Shuar hallucinogen. Considered very dangerous, it sometimes is added tonatem mixtures or it may be taken alone. Other plants used in hallucinogens or in narcotic beverages includeBrunfelsia grandiflora, Cyperus spp.,Diplopterys cabrerana, Heliconia stricta, Herrania spp., andIlex guayusa.     

Efficacy of some commerical disinfectants against the bacterial isolates from a poultry slaughterhouse in Turkey

In this study, efficacy of seven different commercial disinfectant preparations was investigated against characteristic bacteria of a poultry slaughterhouse in Ankara (Turkey) by using paper disc-agar diffusion method and surface effectiveness test. According to paper disc-agar diffusion method, some disinfectants had wide efficacy against the test bacteria. The disinfectant effectiveness generally increased by the increasing of disinfectant concentration. However, some disinfectants were ineffective even though at their highest concentrations. The most effective disinfectant was B which contains QAC as active agent.Staphylococcus spp.,Staphyloccus aureus andEscherichia coli were the most sensitive bacteria to the disinfectants. Some pathogenic isolates, especiallySalmonella spp. andCampylobacter spp., were the most resistant ones to many of the disinfectants tested. The results of paper disc-agar diffusion method indicated the importance of characteristic bacterial strains of food plants as the test bacteria for disinfectant efficacy tests. Conversely of paper disc-agar diffusion method, all disinfectants were effective against the isolates by surface effectiveness test depending on exposure time. The disinfectants, except A and F, produced at least 3 log unit reduction during 5 min of exposure. However, all disinfectants at their lowest concentrations were effective against all tested bacteria during 15 and 30 min by this test.     

Aspergillus flavus and other mycoflora of groundnut kernels in Israel and the absence of aflatoxin

More than 300 groundnut (peanut) samples collected from different regions of Israel were examined by ELISA for aflatoxin contamination. Samples were designated for export, local consumption or for sowing. None of the samples were contaminated with the toxin. However, when kernels were kept at high humidity (RH?99%), aflatoxin could be frequently detected seven days after incubation and the toxin was not uniformly distributed among kernels.Aspergillus niger, A flavus, Penicillium citrinum andP pinophilum were the dominant fungi and no differences were observed among cultivars. Almost half of the commercial samples examined were devoid ofA flavus. Other fungi identified wereA tamaril, A amstelodami, P rubrum, Rhizoctonia solani, Macrophomina phaseolina, Rhizopus spp., Sclerotium rolfsll, Fusarium andAlternaria spp; the two last ones comprising a group of low incidence. Although groundnut samples that containA flavus—infected kernels are moderately common, the local climate and agrotechniques In use in Israel are not conducive to aflatoxin accumulation. Nevertheless infected kernels may become a threat to health if stored under inadequate conditions.     

A survey of outdoor and indoor airborne fungal spora in the Redemption City, Ogun State, south-western Nigeria

The concentration and biodiversity of airborne fungi of the Redemption City, an immense campground for Christian faithful and the temporary site of the Redeemer’s University in south-western Nigeria, was studied between February and May 2011 using the culture plate method. The study was undertaken to assess the concentrations of fungal spores and their health implication in this ever-busy environment. Fifteen different sites classified as closed or open were selected. During the experiment, a total of 228 colonies were counted, and 29 fungal species belonging to 26 genera were isolated which include the following: Aspergillus flavus, Aspergillus niger, Bipolaris spp., Chrysosporium spp., Cladosporium spp., Coniothyrium corda, Curvularia spp., Diplodia spp., Fusarium spp., Gliocladium spp., Monilia spp., Mucor spp., Mucor plumbeus, Penicillium spp., Phycomyces spp., Phytophthora spp., Pilobolus spp., Pyrenochaeta spp., Rhizopus stolonifer, Torula spp., Trichoderma spp. and Trichophyton spp. The most frequently occurring fungi were A. niger, C. corda and M. plumbeus, while the least recorded were Torula and Trichophyton species. Majority of the fungi isolated are known allergens; they could also be opportunistic causing various diseases in man. There is therefore a dire need for good sanitation practices within the studied areas of the camp.     

Stratigraphy and palynology of the Pennsylvanian continental Buçaco Basin (NW Iberia)

The Buçaco Basin is a Pennsylvanian continental basin located along an important NNW–SSE strike structure (Porto-Tomar-Ferreira do Alentejo shear zone) that separates the Ossa-Morena and Central Iberian Zones of the Iberian Variscan Fold Belt in central western Portugal. The shear zone controlled the sedimentation in the basin and probably its post-sedimentary evolution. Sedimentation is initially alluvial with characteristic red sandstones, breccias and conglomerates. A gradual change to a fluvial (and probably lacustrine) type of sedimentation is observed with finning-upward cycles of gravel conglomerates, sandstones and organic-rich mudstones with occasional coal seams. Three representative sections were sampled for palynology and seventeen samples yielded sporomorphs with moderate to poor preservation. The palynological content from the alluvial sediments shows low diversity and poorly preserved assemblages dominated by Triquitrites spp., Densosporites spp., Laevigatosporites spp., and other taxa associated with siliciclastic environments or rheophytic mires. The fluvial and lacustrine sediments show a dramatic increase in diversity with an abundant, typical peatland microflora including sporomorphs such as Endosporites spp., Lycospora spp. and Monoletes spp., but also marginal peat and siliciclastic substrate taxa such as Densosporites spp., Latensina/Cordaitina spp., and Florinites spp. Other common taxa are Cheiledonites spp., Crassispora spp., Dictyotriletes-like miospores (mostly fragments), Potonieisporites spp., and Wilsonites spp. The presence and considerable abundance of Potonieisporites novicus and Cheiledonites cf. major is indicative of the middle to upper Potonieisporites novicus-bhardwajii–Cheiledonites major (NBM) miospore biozone of Western Europe, corresponding to the late Stephanian (early Gzhelian).     

Discovery and testing of a climatically adapted strain ofLongitarsus jacobaeae [Col.: Chrysomelidae] for Australia

The Italian strain of the halticine,Longitarsus jacobaeae (Waterhouse), already successfully used in controlling ragwort,Senecio jacobaea L., in northern California, was considered ill-adapted to the climatic areas in Australia where ragwort infestations occur. A strain ofL. jacobaeae was found at Annonay, Central France where the climate is more appropriate. This strain was teste against a restricted group of composites,Acacia spp. andEucalyptus spp. to confirm its safety for introduction into Australia.     

One-day Workflow Scheme for Bacterial Pathogen Detection and Antimicrobial Resistance Testing from Blood Cultures

Bloodstream infections are associated with high mortality rates because of the probable manifestation of sepsis, severe sepsis and septic shock¹. Therefore, rapid administration of adequate antibiotic therapy is of foremost importance in the treatment of bloodstream infections. The critical element in this process is timing, heavily dependent on the results of bacterial identification and antibiotic susceptibility testing. Both of these parameters are routinely obtained by culture-based testing, which is time-consuming and takes on average 24-48 hours^{2, 4}. The aim of the study was to develop DNA-based assays for rapid identification of bloodstream infections, as well as rapid antimicrobial susceptibility testing. The first assay is a eubacterial 16S rDNA-based real-time PCR assay complemented with species- or genus-specific probes⁵. Using these probes, Gram-negative bacteria including Pseudomonas spp., Pseudomonas aeruginosa and Escherichia coli as well as Gram-positive bacteria including Staphylococcus spp., Staphylococcus aureus, Enterococcus spp., Streptococcus spp., and Streptococcus pneumoniae could be distinguished. Using this multiprobe assay, a first identification of the causative micro-organism was given after 2 h.Secondly, we developed a semi-molecular assay for antibiotic susceptibility testing of S. aureus, Enterococcus spp. and (facultative) aerobe Gram-negative rods⁶. This assay was based on a study in which PCR was used to measure the growth of bacteria⁷. Bacteria harvested directly from blood cultures are incubated for 6 h with a selection of antibiotics, and following a Sybr Green-based real-time PCR assay determines inhibition of growth. The combination of these two methods could direct the choice of a suitable antibiotic therapy on the same day (Figure 1). In conclusion, molecular analysis of both identification and antibiotic susceptibility offers a faster alternative for pathogen detection and could improve the diagnosis of bloodstream infections.     

Diazotrophic diversity, nifH gene expression and nitrogenase activity in a rice paddy field in Fujian, China

The diazotrophic communities in a rice paddy field were characterized by a molecular polyphasic approach including DNA/RNA-DGGE fingerprinting, real time RT-PCR analysis of nifH gene and the measurement of nitrogen fixation activities. The investigation was performed on a diurnal cycle and comparisons were made between bulk and rhizosphere / root soil as well as between fertilized / unfertilized soils. Real time RT-PCR showed no significant difference in the total quantity of nifH expression under the conditions investigated. The functional diversity and dynamics of the nifH gene expressing diazotroph community investigated using RT-PCR-DGGE revealed high diurnal variations, as well as variation between different soil types. Most of the sequence types recovered from the DGGE gels and clone libraries clustered within nifH Cluster I and III (65 different nifH sequences in total). Sequence types most similar to Azoarcus spp., Metylococcus spp., Rhizobium spp., Methylocystis spp., Desulfovibrio spp., Geobacter spp., Chlorobium spp., were abundant and indicate that these species may be responsible for the observed diurnal variation in the diazotrophic community structure in these rice field samples. Previously described diazotrophic cyanobacterial genera in rice fields, such as Nostoc and Cyanothece, were present in the samples but not detectable in RT-PCR assays.     

Dryinid (Hym.: Dryinidae) parasitoids ofDalbulus leafhopper (Hom.: Cicadellidae) in Mexico

Little is known about the natural enemies of the leafhopperDalbulus spp. (Homoptera: Cicadellidae). Searches for its dryinid (wasps) parasitoids were made in Jalisco, Mexico. Jalisco contains the greatest number ofDalbulus species, and is considered to be near to the center of origin of this leafhopper genus and its host plants: maize, teosintes (Zea spp.) and gamagrasses (Tripsacum spp.). The dryinidGonatopus bartletti was found parasitizingD. maidis on maize and on annual teosinteZea mays spp.parviglumis. G. flavipes was found parasitizingD. elimatus on perennial teosinteZ. perennis; and a new speciesG. moyaraygozai andAnteon ciudadi parasitizingD. quinquenotatus onTripsacum pilosum andT. dactyloides. Parasitism by dryinids was found at altitudes of 680–2,000 m.Dalbulus maidis, the leafhopper species which causes the greatest losses in maize in Latin America, was found to be parasitized from 680–1,760 m. TheDalbulus species associated with annual host plants (maize andZ. mays spp.parviglumis) were parasitized by dryinids during the rainy season, while theDalbulus species associated with perennial host plants (Z. perennis andTripsacum) were parasitized by dryinids during both the rainy and dry season. The greatest diversity of dryinid parasitoids ofDalbulus spp. and the highest levels of parasitism were recorded from perennial plants, indicating that such species are reservoirs of natural enemies ofDalbulus spp.     

Detection of Plasmid Transfer from Pseudomonas fluorescens to Indigenous Bacteria in Soil by Using Bacteriophage φR2f for Donor Counterselection

The transfer of a genetically marked derivative of plasmid RP4, RP4p, from Pseudomonas fluorescens to members of the indigenous microflora of the wheat rhizosphere was studied by using a bacteriophage that specifically lyses the donor strain and a specific eukaryotic marker on the plasmid. Transfer of RP4p to the wheat rhizosphere microflora was observed, and the number of transconjugants detected was approximately 10³ transconjugants per g of soil when 10⁷ donor cells per g of soil were added; transfer in the corresponding bulk soil was slightly above the limit of detection. All of the indigenous transconjugants which we analyzed contained a 60-kb plasmid and were able to transfer this plasmid to a Nx^r Rp^rP. fluorescens recipient strain. The indigenous transconjugants were identified as belonging to Pseudomonas spp., Enterobacter spp., Comamonas spp., and Alcaligenes spp.     

Natural enemies ofTomicus Piniperda andIps acuminatus (Col,scolytidae) onPinus sylvestris near orléans,france: Temporal occurrence and relative abundance,and notes on eight predatory species

Ips acuminatus (Gyllenhall) andTomicus piniperda (L.) were the main scolytid beetles in Scots pine,Pinus sylvestris L., outbreak areas near Orléans, France during 1978-1979.Ips acuminatus attacked thin-bark logs whileT. piniperda attacked thick-bark logs. More than 150 species of insects were associated with these scolytids. Forty-five species (31 predators and 14 parasitoids) were confirmed as natural enemies of bark beetles. Three predators were abundant:Thanasimus formicarius L. (Col.: Cleridae),Rhizophagus depressus (F.) (Col.: Rhizophagidae) andMedetera spp. (Dipt.: Dolichopodidae). The first two were especially frequent in galleries ofT. piniperda, whileMedetera spp. were more abundant in galleries ofI. acuminatus. The main parasitoids wereRhopalicus tutela (Walker) andR. brevicornis Thomson (Hym.: Pteromalidae),Coeloides abdominalis Zetterstedt andC. melanostigma Strand,Dendrosoter middendorfi Ratzeburg andD. hartigii Ratzeburg, andSpathius rubidus Rossi (Hym.: Braconidae). These parasitoids are polyphagous. However,C. abdominalis was obtained fromT. piniperda but not fromI. acuminatus, while 5.rubidus andD. hartigii were obtained fromI. acuminatus but not fromT. piniperda. Temporal and relative abundance of natural enemies ofT. piniperda andI. acuminatus were studied. The predatorsR. depressus andT. formicarius had complementary limiting effects on bark beetles as adults and larvae ofR. depressus fed mainly on scolytid eggs, whileT. formicarius adults attacked scolytid adults and the clerid larvae preyed upon scolytid larvae. The predatory pressure applied byT. formicarius andR. depressus toT. piniperda early during the spring was later complemented by a series of parasitoids and other predators. This sequential timing of the natural enemies ofT. piniperda suggests that the interactions among the guild are more complementary than adverse. Differential timing of the natural enemies in logs infested byI. acuminatus and some evidence of competition between the predatorsMedetera spp. and parasitoids suggested a less effective control of this scolytid. Number and duration of larval instars were determined, and measurements of predatory activity were made forThanasimus formicarius, Rhizophagus depressus,Hypophloeus fraxini Kugelann (Col.: Tenebrionidae),Platysoma frontale Paykull (Col.: Histeridae), andXylocoris cursitans (Fallen) (Het.: Anthocoridae). Predatory activity was evaluated for last instar larvae and adults ofScoloposcelis obscurella (Zetterstedt) (Het.: Anthocoridae), and for last instar larvae ofMedetera sp. andLonchaea collini Hackman (Dipt.: Lonchaeidae)     

Parasitism of the apple maggot,Rhagoletis pomonella,infesting hawthorns in Washington

Five species of larval parasitoids were reared fromRhagoletis pomonella (Walsh) infested fruit of hawthorn,Crataegus, collected from several locations in southwest Washington over a four year period. A braconid,Biosteres melleus (Gahan), parasitized larvae infesting fruits of a native hawthorn species,Crataegus douglasii Lindl. Another braconid,Opius downesi Gahan, emerged exclusively fromR. pomonella pupae reared from fruits of an introduced species of hawthorn,Crataegus monogyna Jacq. A pteromalid,Pteromalus sp., and two eulophids,Tetrastichus spp., attackedR. pomonella larvae infesting fruits of both hawthorn species. No parasitoids emerged from a total of 4385 pupae reared from apple. Percent parasitism ofR. pomonella was higher inC. monogyna compared toC. douglasii fruits. The highest average levels of parasitism ofR. pomonella inC. monogyna andC. douglasii fruits were 90% and 23% respectively. The kinds of parasitoids, their relative abundances and timing of parasitization on the two hawthorns was related to differences in fruit ripening patterns and its effect on the development ofR. pomonella on these two hosts. Parasitization ofR. pomonella byTetrastichus spp. is a new host record. The detection of these species andPteromalus sp. in southwest Washington are the first records of ectoparasitoids attacking this tephritid.