Anastomoses and nuclear condition in Cephalosporium coccorum petch

Nuclear condition and formation of anastomoses inC. coccorum Petch have been reported. Preliminary study on the nuclear condition shows that the vegetative mycelium and conidia are uninucleate. Anastomoses in mycelium and conidia are discernible. Hyphal fusion through anastomosing bridges and nuclear migration through them show the possibility of heterokaryosis in the organism. Nutrient free medium is suitable for the development of anastomoses both in mycelium as well as in conidia.     

Trikaryon formation and nuclear selection in pairings between heterokaryons and homokaryons of the root rot pathogen Heterobasidion parviporum

Pairings between heterokaryons and homokaryons of Agaricomycete fungi (he-ho pairings) can lead to either heterokaryotization of the homokaryon or displacement of the homokaryotic nucleus through migration of nuclei from the heterokaryon into the homokaryon. In species of Agaricomycetes with multinucleate cells (>2 nuclei per cell), he-ho pairings could result in the stable or transient formation of a hypha with three genetically different nuclei (trikaryons). In this study, he-ho pairings were conducted using the multinucleate Agaricomycete Heterobasidion parviporum to determine whether trikaryons can be formed in the laboratory and whether nuclear genotype affects migration and heterokaryon formation. Nuclei were tracked by genotyping the heterokaryotic mycelium using nucleus-specific microsatellite markers. The data indicated that certain nuclear combinations were favored, and that nuclei from some strains had a higher rate of migration. A high percentage of trikaryons (19 %) displaying three microsatellite alleles per locus were identified among subcultures of the he-ho pairings. Using hyphal tip and conidial isolation, we verified that nuclei of three different mating types can inhabit the same mycelium, and one of the trikaryotic strains was judged to be semi-stable over multiple sub-culturing steps, with some hyphal tips that retained three alleles and others that reduced to two alleles per locus. These results demonstrate that nuclear competition and selection are possible outcomes of heterokaryon-homokaryon interactions in H. parviporum and confirm that ratios of component nuclei in heterokaryons are not strictly 1:1. The high rate of trikaryon formation in this study suggests that fungi with multinucleate cells may have the potential for greater genetic diversity and recombination relative to dikaryotic fungi.     

Analysis of mutational lesions of acetate metabolism in Neurospora crassa by 13C nuclear magnetic resonance.

The adaptation of Neurospora crassa mycelium to growth on acetate as the sole carbon source was examined by using 13C nuclear magnetic resonance. Extracts were examined by nuclear magnetic resonance at various times after transfer of the mycelium from medium containing sucrose to medium containing [2-13C]acetate as the sole carbon source. The label was initially seen to enter the alanine, glutamate, and glutamine pools, and after 6 h 13C-enriched trehalose was evident, indicating that gluconeogenesis was occurring. Analysis of the isotopomer ratios in the alanine and glutamate-glutamine pools indicated that substantial glyoxylate cycle activity became evident between 2 and 4 h after transfer. Immediately after transfer of the mycelium to acetate medium, the alanine pool increased to about four times its previous level, only a small fraction of which was enriched with 13C. The quantity of 13C-enriched alanine remained almost constant between 2 and 7.5 h after the transfer, whereas the overall alanine pool decreased to its original level. The selective catabolism of the unenriched alanine leads us to suggest that the alanine pool is partitioned into two compartments during adaptation. Two acetate-nonutilizing mutants were also studied by this technique. An acu-3 strain, deficient for isocitrate lyase (EC 4.1.3.1) activity, showed metabolic changes consistent with this lesion. An acp strain, previously thought to be deficient in an inducible acetate permease, took up [2-13C]acetate but showed no evidence of glyoxylate cycle activity despite synthesizing the necessary enzymes; the lesion was therefore reinterpreted.     

Mycelium differentiation and antibiotic production in submerged cultures of Streptomyces coelicolor

Despite the fact that most industrial processes for secondary metabolite production are performed with submerged cultures, a reliable developmental model for Streptomyces under these culture conditions is lacking. With the exception of a few species which sporulate under these conditions, it is assumed that no morphological differentiation processes take place. In this work, we describe new developmental features of Streptomyces coelicolor A3(2) grown in liquid cultures and integrate them into a developmental model analogous to the one previously described for surface cultures. Spores germinate as a compartmentalized mycelium (first mycelium). These young compartmentalized hyphae start to form pellets which grow in a radial pattern. Death processes take place in the center of the pellets, followed by growth arrest. A new multinucleated mycelium with sporadic septa (second mycelium) develops inside the pellets and along the periphery, giving rise to a second growth phase. Undecylprodigiosin and actinorhodin antibiotics are produced by this second mycelium but not by the first one. Cell density dictates how the culture will behave in terms of differentiation processes and antibiotic production. When diluted inocula are used, the growth arrest phase, emergence of a second mycelium, and antibiotic production are delayed. Moreover, pellets are less abundant and have larger diameters than in dense cultures. This work is the first to report on the relationship between differentiation processes and secondary metabolite production in submerged Streptomyces cultures.     

Isolation of high quality and yield of RNA from Agaricus bisporus with a simple, inexpensive and reliable method

A method for isolating high purity and quantity RNA from Agaricus bisporus which is rich in proteins, carbohydrate, fiber and secondary metabolites, is described. RNA was extracted from mycelium, primordia, sporophores at two development stages and two post-harvest storage stages as well as from pileipellis, inner cap, gill and stipe of the mature sporophore. The A(260)/A(230) and A(260)/A(280) ratios of isolated RNA from fruiting bodies were both ~2 and the yield was about 200 μg/g fresh wt (FW). The yield of RNA from mycelium was approx. 100 μg/g FW. High quality RNA was also extracted from fruiting body tissues of Lentinus edodes, Pleurotus ostreatus, Flammulina velutipes and Pleurotus eryngii with yields from 130 to 225 μg/g FW. RNA extracted from all samples was intact, as demonstrated by gel electrophoresis and was suitable for downstream molecular applications, including RT-PCR and qPCR.     

Suppression of a Mutation Disruptive to Nuclear Migration in Schizophyllum by a Gene Linked to the B Incompatibility Factor

A gene which can suppress a specific mutation disruptive to nuclear migration in Schizophyllum is described. It controls the rate of migration of invading nuclei through the mutant mycelium, thus suppressing the mutant character. The gene is located between the two loci of the B incompatibility factor.     

Efficient genetic analysis of fungal samples

We present a method for rapid genetic analysis of small amounts of fungal material. Sterile glass slides, sufficiently small to fit in a standard PCR tube, were placed on agar inside a Petri dish. After a few days, fungal cultures start to overgrow the glass slides. Glass slides with attached mycelium were harvested, analysed microscopically, and placed into a standard PCR tube. Conserved primers flanking the ITS regions of rDNA repeat were used in a direct PCR with the fungal material. Sequence data were generated to be included in phylogenetic analyses to investigate the relationships of the studied mycorrhizal fungi from orchids. The mycelium attached to glass slides was also used for an in situ hybridization experiment using fluorescent labelled oligonucleotides as probes. Fluorescent signal was found throughout the cytoplasm when a probe specific to a site in the nuclear small subunit rRNA is used.     

Saprotrophic cord systems: dispersal mechanisms in space and time

In natural terrestrial environments, nutrients are often patchily and sparsely distributed, and the microclimate is constantly changing both temporally and spatially. To survive, fungi must be able to transfer to a new resource before the nutrient supplies in their current food base are exhausted. While the majority of fungi propagate as spores, some basidiomycetes can grow out of a resource as mycelium in search of new resources. The mycelium of these fungi typically aggregates to form linear organs, termed cords or rhizomorphs, that ramify at the soil-litter interface in forests, interconnecting disparate litter components to form extensive (many square meters or even hectares), long-lived (many years) systems. These mycelial systems form effective dispersal mechanisms in space and time. This article reviews the two main, but not mutually exclusive, mycelial dispersal (resource capture) strategies: (1) a “sit and wait” strategy, whereby a large mycelial network waits for resources to land on it and then actively colonises those resources; and (2) growing and searching actively for new resources. The way in which mycelia balance exploration and nutrient transport, and robustness to damage, against “cost” of production and speed with which an area can be colonised, is explored using techniques borrowed from graph theory and statistical mechanics.     

New species, Actinomadura fulvescens sp. nov. and Actinomadura turkmeniaca sp. nov. and their antagonistic properties

Two new species of Actinomadura isolated from soil samples of the Turkmen SSR, i.e. Actinomadura fulvescens sp. nov. and Actinomadura turkmeniaca sp. nov. are described. The first species is characterized by formation of short (1-2 turns) spiral spore chains, smooth spores, scanty white aerial mycelium, colourless or yellowish substrate mycelium on synthetic media and brownish-yellow substrate mycelium and soluble pigment of the same colour on organic media. No melanoid pigment is secreted. The type culture is designated as INA 3321. The cultures of A. fulvescens show antibiotic activity. A. turkmeniaca is characterized by formation of short straight or spiral spore chains, smooth spores, scanty white aerial mycelium, substrate mycelium and soluble pigment of pinkish-violet colour, absence of melanoid pigment. The type culture is designated as INA 3344. The strains of this species have low antibiotic activity. The study on the use of carbon sources by the representatives of 7 species (9 strains) of Actinomadura showed that the majority of the cultures (5 species, 7 strains) produced no growth on the Pridham and Gottlieb medium (ISP-9) with various carbon sources, including glucose. Possibly this medium cannot be used as the main medium for investigation of the spectrum of carbohydrate consumption in Actinomadura.     

Mating types and pheromone recognition in the Homobasidiomycete schizophyllum commune.

In the homobasidiomycete Schizophyllum commune the mating type genes of the B locus encode pheromones and pheromone receptors in multiple allelic specificities. Interaction of non-self pheromones and receptors leads to induction of B-regulated development easily scored in S. commune by the "flat" phenotype which lacks aerial mycelium formation and shows aberrant hyphal morphology. In contrast, self pheromones are not recognized and B-regulated development is not induced. Natural and mutant alleles of receptors have been analyzed for their specificity in transformation assays, and parts of the receptor involved in ligand discrimination can be described. The biological role of pheromone response in S. commune is assumed to be connected to nuclear migration based on the observation that wild-type cells with a receptor gene of different specificity lead to cells capable of nuclear uptake. Other possible roles for pheromone function are discussed.     

Senescence in fungi: the view from Neurospora

Some naturally occurring strains of fungi cease growing through successive subculturing, i.e., they senesce. In Neurospora, senescing strains usually contain intramitochondrial linear or circular plasmids. An entire plasmid or its part(s) integrates into the mtDNA, causing insertional mutagenesis. The functionally defective mitochondria replicate faster than the wild-type mitochondria and spread through interconnected hyphal cells. Senescence could also be due to spontaneous lethal nuclear gene mutations arising in the multinucleated mycelium. However, their phenotypic effects remain masked until the nuclei segregate into a homokaryotic spore, and the spore germinates to form a mycelium that is incapable of extended culturing. Ultimately the growth of a fungal colony ceases due to dysfunctional oxidative phosphorylation. Results with senescing nuclear mutants or growth-impaired cytoplasmic mutants suggest that mtDNA is inherently unstable, requiring protection by as yet unidentified nuclear-gene-encoded factors for normal functioning. Interestingly, these results are in accord with the endosymbiotic theory of origin of eukaryotic cells.     

Phylogenetic characterization and in situ detection of a Cytophaga-Flexibacter-Bacteroides phylogroup bacterium in Tuber borchii vittad. Ectomycorrhizal mycelium

Mycorrhizal ascomycetous fungi are obligate ectosymbionts that colonize the roots of gymnosperms and angiosperms. In this paper we describe a straightforward approach in which a combination of morphological and molecular methods was used to survey the presence of potentially endo- and epiphytic bacteria associated with the ascomycetous ectomycorrhizal fungus Tuber borchii Vittad. Universal eubacterial primers specific for the 5' and 3' ends of the 16S rRNA gene (16S rDNA) were used for PCR amplification, direct sequencing, and phylogenetic analyses. The 16S rDNA was amplified directly from four pure cultures of T. borchii Vittad. mycelium. A nearly full-length sequence of the gene coding for the prokaryotic small-subunit rRNA was obtained from each T. borchii mycelium studied. The 16S rDNA sequences were almost identical (98 to 99% similarity), and phylogenetic analysis placed them in a single unique rRNA branch belonging to the Cytophaga-Flexibacter-Bacteroides (CFB) phylogroup which had not been described previously. In situ detection of the CFB bacterium in the hyphal tissue of the fungus T. borchii was carried out by using 16S rRNA-targeted oligonucleotide probes for the eubacterial domain and the Cytophaga-Flexibacter phylum, as well as a probe specifically designed for the detection of this mycelium-associated bacterium. Fluorescent in situ hybridization showed that all three of the probes used bound to the mycelium tissue. This study provides the first direct visual evidence of a not-yet-cultured CFB bacterium associated with a mycorrhizal fungus of the genus Tuber.     

The kinetics of mycelial growth.

Based on the assumption that mycelial growth follows the logistic growth law, formulae have been developed to express the growth of fungal colonies under a variety of geometric constraints. Analysis was done of Deppe's (1973) results on surface colony growth, where the mass of the colony grew exponentially during most colonial growth, and of Trinci's (1970) results on submerged "pellet" growth, where the mass of the colony increased as the cube of time during most colony growth. In both cases, the linear dimensions of the colony were increasing linearly while the mass was changing in these quantitatively different manners. It is concluded that these disparate growth behaviours result from different habits of growth; in two-dimensional colony growth a new region of space if invaded by an amount of mycelium small in proportion to the final "carrying capacity" of the region, and in three-dimensional colony growth a region is invaded with an amount of mycelium almost equal to the region's final limiting mycelial mass. Thus, the types of growth law for colony mass which are applicable for a particular organism in a particular physical environment depend critically on the degree to which the invading hyphae initially occupy the space.     

Induction of programmed lysis in <Emphasis Type="Italic">Streptomyces lividans</Emphasis> culture by the inhibitors of eukaryotic type serine/threonine protein kinases

Programmed death (PD) of the mycelium of Streptomyces lividans, namely, its delayed lysis in response to treatment with indolylmaleimide derivatives, which inhibit actinobacterial serine/threonine protein kinases (STPK), is described. Delayed lysis of mycelial cell was accompanied by DNA damage similar to PD in differentiating S. lividans mycelium. Two-dimensional electrophoresis and mass spectrometry were used to identify proteins up-regulated by a PD-inducing STPK inhibitor. Most of these proteins are known to be implicated in responses to various stress stimuli. Thus, our model of delayed cell lysis of actinobacteria upon STPK inhibition may serve for unveiling the molecular mechanisms of bacterial PD and for antimicrobial drug design.     

富贵竹黑腐病拮抗菌H5的抑菌机制及相关特性研究

从湛江红树植物-红海榄筛选出1株对引起富贵竹病害黑曲霉病菌(Aspergillus niger)有良好抑制作用的菌株编号为H5, 初步鉴定为地衣芽孢杆菌(Bacillus licheniformis)。该菌株采用平板对峙、生长速率法及管碟法对黑曲霉均表现良好的抑制作用, 发酵原液对菌丝生长和孢子萌发的抑制率分别为91.9%和100%, 抑菌带内菌丝扭曲畸形、表面产生大量囊状突起。其无菌滤液对酸碱、热稳定性较好, 经55%硫酸铵沉淀后经121℃处理25 min仍能保持大部分活性, 初步推测该物质为一种耐热的蛋白。     

Streptomyces maghwi, a new species producing roflamycoin

A new Streptomyces species is described for which the name S. maghwi is proposed. The organism is characterized by a pink mass of aerial mycelium, spiral spore chains, spores with smooth surfaces and a nonchromogenic vegetative mycelium. S. maghwi produces roflamycoin (Schlegel et al. 1981) formerly known as flavomycoin (Schlegel et al. 1971). The type strain of S. maghwi is deposited with CBS, Netherland.     

富贵竹黑腐病拮抗菌H5的抑菌机制及相关特性研究

从湛江红树植物-红海榄筛选出1株对引起富贵竹病害黑曲霉病菌(Aspergillus niger)有良好抑制作用的菌株编号为H5,初步鉴定为地衣芽孢杆(Bacillus licheniformis).该菌株采用平板对峙、生长速率法及菅碟法对黑曲霉均表现良好的抑制作用,发酵原液对茵丝生长和孢子萌发的抑制率分别为91.9%和100%,抑菌带内菌丝扭曲畸形、表面产生大量囊状突起.其无菌滤液对酸碱、热稳定性较好,经55%硫酸铵沉淀后经121℃处理25 min仍能保持大部分活性,初步推测该物质为一种耐热的蛋白.     

The Seed-borne Inoculum of Peronospora manshurica, Causal Agent of Soybean Downy Mildew

The seed-borne inoculum of P. manshurica is described using various microscopic techniques and staining reactions. The inoculum, in addition to the oospores, consists of a thin walled mycelium under the hourglass cell layer of the seed coat and a thick walled resting mycelium in the oospore crust on the seed surface. By a modified Feulgen staining technique it was possible to demonstrate that the thin walled and the thick walled resting mycelium as well as thin and thick walled oogonia contain nuclei which are Feulgen positive suggesting that portions of the mycelium of P. manshurica may survive even on the surface of dry, mature seeds.