A NUMERICAL TAXONOMIC STUDY OF THE GENUS PLATANUS BASED ON MORPHOLOGICAL AND PHENOLIC CHARACTERS

Forty-two morphological and eighty chemical (phenolic) characters were employed on a numerical taxonomic study of the genus Platanus. Ten taxa were used for morphological study, and nine were available for chemical study. UPGA was employed for cluster analysis; correlation coefficients served as a measurement of the similarity between each OTU-pair. Comparison was made for phenograms and graph diagrams of nine taxa based on morphological characters with those based on chemical characters. It has been found that the two agree with each other in many respects. Correlation coefficient between similarity matrices based on morphological and chemical characters is 0.573. The result generally supports the belief that taxa closely related on morphological grounds are similar biochemically. A systematic consideration of the genus has been made, based on the information available.     

Taxonomic implications of foliar epidermis in Impatiens (Balsaminaceae): Investigating 12 Pakistani taxa as an example

Impatiens L. is taxonomically a complicated genus that necessitates fresh characterization to resolve its taxonomy. This study therefore aimed at ascertaining micro-morphological characters in the foliar epidermis of Impatiens. For this purpose, we gathered twelve taxa (10 species and 2 subspecies) mostly from the northern regions of Pakistan and studied qualitative and quantitative characters depicting variation in epidermal cells, stomata, and trichomes on both surfaces. Multicellular, uniseriate trichomes were observed only in I. balsamina L., and raphides in I. balfourii Hook. f. and I. thomsonii Hook. f. while stomata were exclusively anomocytic in all species. Morphological variation in the foliar epidermal characters and their diagnostic value has been depicted by constructing a taxonomic key to all taxa. The study revealed that although foliar epidermal characters in Impatiens did not desirably assort taxa on the basis of structural topographies, yet demonstrated adequate variation distinguishing the Pakistani taxa.     

淫羊藿属植物形态分类性状评述

淫羊藿属是分类学上研究的热点和难点,其类群发表和修订均较频繁。为更清晰掌握淫羊藿属的性状变异,该文在查阅该属研究成果和标本的基础上,结合课题组野外调查和分析,对该属重要性状进行系统梳理。花瓣式样是淫羊藿属分类的最重要依据,但并非绝对稳定,种内花瓣形态可能存在丰富变异。花瓣颜色、花药颜色,甚至花的大小至少在部分类群中不宜作为分类的主要依据。根茎性状在多数类群中不失为一个有用的分类性状,但不能一概而论,应基于广泛调查。多数类群的花茎上叶的类型及小叶存在不同程度的变异,在实际应用中存在一定困难。非腺毛特征十分复杂,不同样本存在不同程度差异,不宜作为物种鉴别的关键依据。淫羊藿属植物栽培后植株普遍更矮小,提示开展自然生境下的调查和形态观测对掌握物种形态特征非常必要。中国淫羊藿属类群仍处于活跃进化中,其形态变异复杂,物种鉴定和资源利用时应足够谨慎。     

Numerical analyses of seed morphology and its taxonomic significance in the tribe Nigelleae (Ranunculaceae)

We examined the seed morphology of Nigella, Garidella and Komaroffia to aid systematics and taxonomy. The seeds of 21 taxa in 20 species from Mediterranean and West Asian countries were studied using both zoom stereo and scanning electron microscopy (SEM). Principal coordinate analysis (PCoA) and unweighted average linkage analysis (UPGMA) were performed to assess the contribution of seed characters to the taxonomy of the tribe. Representative pictures from zoom stereo microscopy and SEM studies and measurement of seeds are presented. Most studied species showed unique seed surface sculpturing features, and seed shape, size and surface sculpturing separated the studied taxa into five main groups. However, the variation in seed shape and color were found to be in conflict with the generic taxonomy while macromorphological characters were found more congruent with the sectional taxonomy than with the generic taxonomy. Five main types of seed ornamentations – rugulose + striate, granulate, smooth, rugulose and mucronulate – were identified. Patterns in seed micromorphology strongly supported the sectional level taxonomy of Nigella. Two of the three sections of the genus were found to be well differentiated in terms of seed characters. Furthermore, seed morphology alone provide good support to Garidella as a distinct genus, but shows less taxonomic value for Komaroffia.     

Comparative floral and vegetative differentiation between two European Aquilegia taxa along a narrow contact zone

As a first step in determining the identity and relative importance of the evolutionary forces promoting the speciation process in two closely related European taxa of Aquilegia, we investigated the levels of morphological variation in floral and vegetative characters over the narrow region where their ranges enter into contact, and evaluate the relative importance of both types of traits in their differentiation. A total of 12 floral and ten vegetative characters were measured on 375 plants belonging to seven A. vulgaris populations and six A. pyrenaica subsp. cazorlensis populations located in southeastern Spain. Floral and vegetative morphological differentiation occur between taxa and among populations within taxa, but only vegetative characters (particularly plant height and leaf petiolule length) contribute significantly to the discrimination between taxa. Differentiation among populations within taxa is mostly explained by variation in floral traits. Consequently, morphological divergence between the two taxa cannot be interpreted as an extension of among-population differences occurring within taxa. Multivariate vegetative, but not floral, similarity between populations could be predicted from geographical distance. Moreover, the key role of certain vegetative traits in the differentiation of A. vulgaris and A. p. cazorlensis could possibly be attributable to the contrasting habitat requirements and stress tolerance strategies of the two taxa. These preliminary findings seem to disagree with the currently established view of the radiation process in the genus Aquilegia in North America, where the differentiation of floral traits seems to have played a more important role.     

A Molecular Study of Euglenoid Phylogeny using Small Subunit rDNA

The euglenoids are an ancient and extremely diverse lineage of eukaryotic flagellates with unclear relationships among taxa. Synapomorphies for the euglenoids include a surface pellicle and a closed mitosis with a series of separate sub-spindles. The taxonomy currently in use is inconsistent with the available data and needs revision. Most euglenoid phylogenies are largely intuitive reconstructions based on a limited number of morphological characters. Therefore, we have added molecular characters from the Small Subunit (SSU) rDNA to generate an overall phylogenetic framework for the euglenoids. SSU rDNA sequences from photosynthetic, osmotrophic, and phagotrophic euglenoids were aligned based on secondary structure. Phylogenetic analysis using the conserved areas of the sequence was performed using parsimony, maximum likelihood, and distance methods. Trees derived using different criteria are in agreement. The euglenoids form a distinct monophyletic clade with phagotrophic members diverging prior to the phototrophic and osmotrophic members. Among photosynthetic members, the biflagellate form diverged prior to the uniflagellate form. Additionally, the genus Euglena appears to be paraphyletic, with osmotrophic taxa, such as Astasia and Khawkinea, diverging independently within the clade containing the photosynthetic genus Euglena.     

Micromorphology of the achene epidermis of Kobresia (Cyperaceae) revealed by SEM and its taxonomic significance

The taxonomy of the genus Kobresia is difficult and based on morphological characters. Achene micromorphology of the genus was studied with scanning electron microscopy (SEM), and its taxonomic significance evaluated. A total of 39 species and subspecies of Kobresia were included. The shape of epidermal cells of achenes is usually polygonal or rectangular. The anticlinal walls of the epidermal cells are mostly straight, rarely sinuous. Generally, a silica platform is formed on the inner periclinal wall of achene epidermal cell, and 1–3 silica bodies protrude from the middle of the platform. Sometimes, satellite silica bodies exist around the central bodies. The silica platform may be solid or perforated by pits. The micromorphological characters of the achene epidermis vary between different taxa. However, some closely related taxa show similarities. Therefore, the micromorphology of the achene epidermis of Kobresia is valuable in understanding the taxonomy at infraspecific, specific and supraspecific levels in the genus.     

Cryptic diversity in the genus <Emphasis Type="Italic">Adineta</Emphasis> Hudson &; Gosse, 1886 (Rotifera: Bdelloidea: Adinetidae): a DNA taxonomy approach

Cryptic species are continuously discovered in rotifers using different methods to delineate these units of diversity. DNA taxonomy is the most effective method taxonomists have to untie potential cryptic taxa. Here, we estimate hidden diversity in a genus of bdelloid rotifers, Adineta. We analyse cryptic diversity using a coalescent approach to infer evolutionarily significant units from a phylogenetic tree obtained from cytochrome oxidase I sequences. Cryptic diversity was measured for eight traditional species and from several additional undetermined populations. Taxonomic inflation of up to 36 taxa was found in A. vaga from DNA taxonomy. As observed in other microscopic organisms, cryptic taxa within each traditional species were not geographically isolated, but had significantly narrower ecological niches than expected by chance alone.     

Three numerical approaches to the classification of Chinese species of genus Abelia

In the last 10—20 years there has bee n increasing awareness of the problem concerning the aims and practices of taxonomy. In particular, there has been growing interest in the development of numerical methods in biological taxonomy as an aid to making systematics a quantitative science, a step which comes in time to almost every scientific discipline. Numerical taxonomy is the evaluation by numerical methods of the affinity or similarity between taxonomic units and the employment of these affinities in erecting a hierarchic order of taxa. The present rapid development of these ideas is presumably a result of the development of computer techniques. Numerical taxonomic approach has been applied to the studies of entomology and microbiology in China to some extent since 1975. But so far it hasn’t been commonly used in botany. The present report is a preliminary study on 9 spp. of the genus Abelia. A set of binary data with 54 characters is used for computing association coefficient; and a set of quantitative data with 47 characters for distance coefficient and correlation coefficient. For the mathematical models were chosen the non-metric simple matching association coefficient, the geometrical distance of Riemannian space and correlation coefficient. Computational procedures are stepwise presented in detail and computer programmes are written in the background of Algol-60 language. Cluster analysis is compared with simple linkage, average linkage and multi-correlation. The results of DC and CC for 9 spp. of Abelia agree closely with the traditional taxonomy, because the data we collected mainly come from morphological characters. It would seem that the results of quantita tive data are more appropriate for seed plants. It is, therefore, postulated that our programes are complementary and very useful to a wide range of classification entities, such as microbes, animals and plants in present situation in China. In conclusion, a comparison between the conventional taxonomy and numerical taxonomy has been made, and a brief discussion of three problems, i.e. the monothetic versus polythetic, divisive versus agglomerative, weighting versus unweighting.     

A comparative study using chemometric and numerical taxonomic approaches in the identification and classification of traditional Chinese medicines of the genus Clematis

Abstract

A comparative study was performed to identify and classify traditional Chinese medicines (TCMs) of the genus Clematis by applying chemometric and numerical methodologies. In the analysis, 12 species representing major TCM plants of the genus and belonging to five different sections – Rectae, Clematis, Meclatis, Tubulosae and Viorna – were identified and demarcated on the basis of morphological and phytochemical characters. In the numerical study (NS), out of 53 selected characters, only 27 phylogenetically informative characters were used for data generation; a phenogram was produced with three distinctive clades. The extent of genetic distances ranged from 0.35 to 0.80. The phytochemical analysis (PA) was conducted using a high performance liquid chromatography coupled with a diode array detector (DAD) and ESI‐MS mode. The compound “Huzhangoside D” (HGD) was the most abundant in the analysed species of the genus. The PA of saponins produced a differential matrix based on the presence or absence of chemical characters, which generated a phenogram. The extent of genetic distances ranged from 0.05 to 0.35 in the phytochemical analysis, with three distinctive clades. Clematis intricata had compounds (HGB, HGD) with GD 0.30, and produced a different pattern of clustering than the previous classification system. The species C. henryi and C. heracleifolia appeared as sister clades having congruent genetic similarity with each other; this is an innovative combination. The classification results of PA and NS approaches corroborate each other, but the chemical fingerprinting method proved more authentic, quick and reliable for the identification and classification of these plant taxa.     

The Beothukis/Culmofrons problem and its bearing on Ediacaran macrofossil taxonomy: evidence from an exceptional new fossil locality

The late Ediacaran siliciclastic successions of eastern Newfoundland, Canada, are renowned for their fossils of soft‐bodied macro‐organisms, which may include some of the earliest animals. Despite the potential importance of such fossils for evolutionary understanding, the taxonomic framework within which Ediacaran macrofossils are described is not clearly defined. Rangeomorphs from a newly discovered fossil surface on the Bonavista Peninsula, Newfoundland, require us to reconsider contemporary use of morphological characters to distinguish between genera and species within Ediacaran taxa. The new surface exhibits remarkable preservational fidelity, resolving features smaller than 0.1 mm in dimension in both frondose and non‐frondose taxa. Such preservation permits the recognition of rarely observed fourth‐ and fifth‐order rangeomorph branching, offering unparalleled opportunities to investigate the fine‐scale construction of rangeomorph taxa including Culmofrons plumosa Laflamme et al., 2012. Our observations enable resolution of taxonomic issues relating to rangeomorphs, specifically overlap between the diagnoses of the frondose genera Beothukis Brasier and Antcliffe, 2009 and Culmofrons. We propose a taxonomic framework for all Ediacaran macrofossils whereby gross architecture, the presence/absence of discrete morphological characters and consideration of growth programme are used to distinguish genera, whereas morphometric or continuous characters define taxa at the species level. On the basis of its morphological characters, Culmofrons plumosa is herein synonymized to a species (Beothukis plumosa comb. nov.) within the genus Beothukis. This discussion emphasizes the need to standardize the taxonomic approach used to describe Ediacaran macrofossil taxa at both the genus and species levels, and raises important considerations for future formulation of higher‐level taxonomic groups.     

Integrative taxonomy and conservation of cryptic beetles in the Mediterranean region (Hydrophilidae)

Arribas, P., Andújar, C., Sánchez‐Fernández, D., Abellán, P. & Millán, A. (2012). Integrative taxonomy and conservation of cryptic beetles in the Mediterranean region (Hydrophilidae). —Zoologica Scripta, 00, 000–000. Because biodiversity inventory forms the basis for the effective conservation of species and habitats, there is an imperative need to discover and describe new species. A significant part of presently unknown biodiversity is constituted by cryptic species complexes, where traditional taxonomy usually fails due to a lack of clear taxonomic characters in the external structures of specimens. Integrative taxonomy offers a powerful tool to shed light on this part of encrypted biodiversity, combining multiple operational criteria in an evolutionary context in order to delineate species boundaries. The present study used an integrative approach to explore the species boundaries in a water beetle complex (Enochrus falcarius species complex) inhabiting saline streams, a rare and threatened habitat across the Mediterranean region. First, hypotheses about the candidate species on the basis of phylogenetic analyses and biogeographical information were proposed. Second, lineage divergence was evaluated between candidate species using (i) molecular cluster delimitation, (ii) morphometry (both linear body morphometrics and pronotum outlines) and (iii) ecological niche similarity estimates. We found divergence between candidate species on the basis of molecular, biogeographical and niche information, and consequently, four species were delimited within the E. falcarius complex (i.e. Enochrus jesusarribasi sp. n., Enochrus blazquezae sp. n., Enochrus risii sp. n. and Enochrus falcarius), despite the fact that they showed high morphological similarity. Enochrus falcarius, as previously considered, had not been proposed to be of conservational concern, because until now, it had been regarded as a single broadly distributed species in the Mediterranean region. However, the four entities here delimited within this species complex displayed characteristics that categorised them as vulnerable taxa. Hence, these results show how applying integrative taxonomy approaches and rapid vulnerability assessments to lineages from threatened habitats with the potential to comprise cryptic diversity could become a fundamental tool for biodiversity conservation, driving the discovery of cryptic species and consequently the modification of previous, inadequately evaluated vulnerability categorisations.     

新疆胡颓子属植物花部性状的变异及其分类学价值

新疆胡颓子属植物栽培历史久、变异丰富、种下变异类型多、分类较为困难,因此有必要进一步发掘该属落叶组植物的分类学特征,尤其是对相对保守的繁殖器官的性状进行筛选。该研究以形态较为稳定的繁殖器官为切入点,分析花部性状的变异特点,筛选稳定性状,以期为解决该属的分类难题提供依据。先采用定株采集和同花标记的方法,对比分析了柱头形态、花盘先端有毛无毛、花柱与雄蕊的长短比、花被裂片程度四个性状的稳定性。结果表明:花盘先端有毛无毛、花柱与雄蕊的长短比、花被裂片程度三个性状较稳定,可以作为分类依据;柱头形态在单花中表现稳定,但在单株中出现极大的变异,不具有分类价值;然后采取新疆南、北疆地区的胡颓子属落叶组的尖果沙枣、大果沙枣和沙枣这三种来验证花部性状的稳定性,证明了上述结论的正确性,同时也是对该属分类研究实践的应用。该结果可为胡颓子属的经典分类学和形态学研究以及植物的开发和利用等提供参考依据。     

New insights into and limitations of the molecular phylogeny in the taxon-rich land snail genus Montenegrina (Mollusca: Gastropoda: Clausiliidae)

Rock-dwelling gastropods are usually patchily distributed in limestone habitats, presumably have low active and passive dispersal ability and often represent narrow-ranged endemic taxa. Their current taxonomy is predominantly shell morphology based, and it remains unknown whether the morphologically differentiated and geographically separated populations represent phylogenetic clades. In this study, we analysed the hyperdiverse, terrestrial door snail genus Montenegrina. Based on the current taxonomy defined by shell morphology, it contains 29 species and 106 subspecies distributed in the Balkan region. The constructed phylogenetic tree using three mitochondrial markers was used to test whether it agrees with the current taxonomy. In this comprehensive tree, about half of the species and subspecies are monophyletic. Some of the paraphylies could be reasonably resolved by taxonomic changes; that is, some subspecies should be reassigned or raised to species level. Other incongruencies probably arose due to introgression even between distant clades. The histone genes turned out to be unsuitable for elucidating the phylogeny of Montenegrina. In the species-delimitation tests, considerably more molecular operational taxonomic units were delimited than the number of presently described species. The present data indicate that (a) shell morphology-based taxonomy and taxon recognition can be problematic in such a large and morphologically highly variable genus; (b) the potential error due to incomplete sampling presents a problem in a genus as variable as Montenegrina; (c) multi-locus analyses should be conducted to arrive at a better basis for species delimitation; and (d) integrative approaches including genetic as well as morphological/anatomical data from a comprehensive geographic sample are necessary.     

Cladistic tests of monophyly and relationships of biostratigraphically significant conodonts using multielement skeletal data –Lochriea homopunctatus and the genus Lochriea

Abstract: Since the 1960s, huge progress has been made in reconstructing the multielement skeletons of conodont species and developing a biologically defensible taxonomy. Nevertheless, a widespread prejudice remains that certain parts of the conodont skeleton, particularly the P₁ elements, are more informative than others with regard to taxonomy and evolutionary relationships. Here, we test these views. A new partial multielement reconstruction of the skeleton of the biostratigraphically significant conodont originally described as Gnathodus commutatus homopunctatus allows us to conduct a cladistic test of the alternative hypotheses of phylogenetic placement of this species. Our analysis also provides the first test of the hypothesis that Lochriea– species of which are markers for global correlation – is monophyletic and tests hypotheses concerning the origins of the genus. Our results demonstrate that homopunctatus is a species of Lochriea and that the genus is monophyletic. The widely held view that Lochriea arose from a species of Bispathodus is not supported. Our results show that it is difficult to predict a priori which parts of the conodont skeleton carry phylogenetic signal, and provide strong support for the hypothesis that similarity in the morphology of conodont P₁ elements alone is not a reliable guide to relationships and taxonomic groupings of conodont species. This is because P₁ elements with similar morphologies are convergently acquired in multiple conodont clades, because reliance on the characters of only one of the six or seven morphologically distinct elements of the conodont skeleton ignores phylogenetically significant data and because P₁ elements can lack characters that might seem to be diagnostic of a genus. Conodonts are no different to other organisms: ignoring data that have the potential to be phylogenetically informative is unlikely to produce the most reliable hypotheses of evolutionary relationships. We suggest that other biostratigraphically significant hypotheses of relationship between conodont taxa that are based on P₁ elements alone should be subject to cladistic testing.     

Morphology,phylogeny and taxonomy of the genus Sectonema (Nematoda,Aporcelaimidae)

This contribution provides new insights in the phylogeny and taxonomy of the nematode genus Sectonema with an integrative approach. A brief historical outline of the matter is presented. Then, the morphological pattern of the genus is revised and illustrated, the nature of its stomatal protruding structure, either a reduced odontostyle or a mural tooth, being its most relevant diagnostic feature. The existence of cilia‐ or seta‐like structures in the perioral area and/or at the anterior part of cheilostom of some species is evidenced by SEM observations for the first time. Available molecular data (D2–D3 LSU‐rRNA gene) are analysed, including two new sequences of S. septentrionale from Spain. The monophyly of the genus is confirmed, and two species groups with geographical projection are tentatively identified. A close relationship with Metaporcelaimus is also demonstrated as both taxa constitute a highly supported clade. A likely polyphyly of the family Aporcelaimidae is once more demonstrated. Finally, an updated taxonomy of the genus is proposed, including revised diagnosis, list of species, identification key and a compendium of their main morphometrics.     

野牡丹族数量分类的初步研究

用ＵＰＧＭＡ聚合法对野牡丹族的４２个性状进行Ｒ分析和对该族华南及台湾地区１５个分类群进行Ｑ分析．Ｒ分析的结果反映了性状之间相关进化及性状与分类群之间相关进化的规律性．Ｑ分析对这些分类群的分类系统做了初步的定量研究．其结论与经典分类基本吻合．Ｑ分析的结果还支持将台湾产的耳药花并入野牡丹属。