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1.
Restriction site variation in the chloroplast genome (cpDNA) was surveyed among 37 taxa or cytotypes (40 accessions) of the genus Hordeum. Seventeen restriction enzymes were employed, and a total of 491 restriction sites were assayed. Of these, 120 were variable among the taxa, including 70 synapomorphies. The level of sequence divergence (p) among species of Hordeum varied from 0.0 to 0.017, indicating that Hordeum possesses an about-average level of cpDNA diversity as compared to most other genera of flowering plants for which data are available. Wagner and polymorphism parsimony phytogenies were constructed from the restriction site data. These analyses divided the genus into several distinct groups; 1) American taxa; 2) diploid H. marinum; 3) Asian taxa; 4) H. vulgare-H. bulbosum; and 5) the H. murinum complex. Bootstrap-based confidence limits provided statistical support for the monophylesis of the latter three groups. The cpDNA data showed remarkably good congruence with previously published isoenzymatic, molecular, cytological, and crossing data.  相似文献   

2.
The pollen morphology of 9 of the 11 genera of the tribe Swartzieae is described together with that of Holocalyx and Cyathostegia, two genera recently removed from the tribe based on macromorphology. The pollen is small, spheroidal to subprolate, primarily tricolporate with a perforate tectum and generally typical of the Leguminosae. Nonetheless, many of the genera have distinctive pollen morphology. Baphiopsis is 6-colporate. The genera Harleyodendron, Lecointea and one species of Exostyles have supratectal spinules. Bocoa viridiflora has striate/rugulate ornamentation very distinct from the other species of the genus Bocoa. The exine stratification is varied but Candolleodendron has a very thick endexine and narrow foot layer. The pollen of African taxa does not differ significantly from that of South American taxa. Pollen morphology does not clarify the taxonomic relationships of the tribe and provides little evidence to assist in positioning Holocalyx and Cyathostegia.  相似文献   

3.
Prokaryotic Nostoc, one of the world's most conspicuous and widespread algal genera (similar to eukaryotic algae, plants, and animals) is known to support a microbiome that influences host ecological roles. Past taxonomic characterizations of surface microbiota (epimicrobiota) of free‐living Nostoc sampled from freshwater systems employed 16S rRNA genes, typically amplicons. We compared taxa identified from 16S, 18S, 23S, and 28S rRNA gene sequences filtered from shotgun metagenomic sequence and used microscopy to illuminate epimicrobiota diversity for Nostoc sampled from a wetland in the northern Chilean Altiplano. Phylogenetic analysis and rRNA gene sequence abundance estimates indicated that the host was related to Nostoc punctiforme PCC 73102. Epimicrobiota were inferred to include 18 epicyanobacterial genera or uncultured taxa, six epieukaryotic algal genera, and 66 anoxygenic bacterial genera, all having average genomic coverage ≥90X. The epicyanobacteria Geitlerinemia, Oscillatoria, Phormidium, and an uncultured taxon were detected only by 16S rRNA gene; Gloeobacter and Pseudanabaena were detected using 16S and 23S; and Phormididesmis, Neosynechococcus, Symphothece, Aphanizomenon, Nodularia, Spirulina, Nodosilinea, Synechococcus, Cyanobium, and Anabaena (the latter corroborated by microscopy), plus two uncultured cyanobacterial taxa (JSC12, O77) were detected only by 23S rRNA gene sequences. Three chlamydomonad and two heterotrophic stramenopiles genera were inferred from 18S; the streptophyte green alga Chaetosphaeridium globosum was detected by microscopy and 28S rRNA genes, but not 18S rRNA genes. Overall, >60% of epimicrobial taxa were detected by markers other than 16S rRNA genes. Some algal taxa observed microscopically were not detected from sequence data. Results indicate that multiple taxonomic markers derived from metagenomic sequence data and microscopy increase epimicrobiota detection.  相似文献   

4.
Three members of the red algal family Halymeniaceae (Thamnoclonium dichotomum (J. Ag.) J. Ag., Codiophyllum flabelliforme (Sond.) Schmitz, and C. decipiens (J. Ag.) Schmitz) are investigated. All are endemic to southern and southwestern Australia, possess basal stalks of substantial size and firmness, and are consistently associated with specific sponge taxa. In each case, the sponges are bonded by collagen-like fibrils to the host cuticle without modifying the algal tissue at the ultrastructural level. Secondary cortication and prominent growth rings occur in the stalks of all three species, and in each the pit plugs between cells become wider, more convoluted and less electron dense with increasing distance from the surface. Such pit plugs are apparently a unique attribute of the stalked Halymeniaceae. The three species share pit plug, sponge association and stalk morphological features but are not otherwise closely related, as they actually represent three distinct genera.  相似文献   

5.
Dinoflagellates are the most abundant protists that produce bioluminescence. Currently, there is an incomplete knowledge of the identity of bioluminescent species arising from inter‐ and intraspecific variability in bioluminescence properties. In this study, PCR primers were designed to amplify the dinoflagellate luciferase gene (lcf) from genetically distant bioluminescent species. One of the primer pairs was “universal,” whereas others amplified longer gene sequences from subsets of taxa. The primers were used to study the distribution of lcf and assess bioluminescence potential in dinoflagellate strains representing a wide variety of taxa as well as multiple strains of selected species. Strains of normally bioluminescent species always contained lcf even when they were found not to produce light, thus demonstrating the utility of this methodology as a powerful tool for identifying bioluminescent species. Bioluminescence and lcf were confined to the Gonyaulacales, Noctilucales, and Peridiniales. Considerable variation was observed among genera, or even species within some genera, that contained this gene. Partial sequences of lcf were obtained for the genera Ceratocorys, Ceratium, Fragilidium, and Protoperidinium as well as from previously untested species or gene regions of Alexandrium and Gonyaulax. The sequences revealed high variation among gene copies that obscured the boundaries between species or even genera, some of which could be explained by the presence of two genetic variants within the same species of Alexandrium. Highly divergent sequences within Alexandrium and Ceratium show a more diverse composition of lcf than previously known.  相似文献   

6.
Abstract— A manual cladistic analysis, subsequently expanded with a PAUP computer analysis, was performed on 21 genera of the monophyletic taxon Pandaloidea. Morphological data were obtained from the literature for 146 of the 152 known species-group taxa and from specimens belonging to 11 genera and 15 species—those of Pantomus parvulus extending the known range from the North Western Atlantic to Uruguay. The taxon Physetocaridoidca was synonymized with Pandaloidea, and the genus Pandalopsis with “Pandalus”. I have rejected reversal hypotheses indicated by the computer for four transformation series and chosen a final cladogram of slightly different topology which is six steps longer than the shortest tree. The cladogram for 20 terminal taxa is based on 108 apomorphic characters, resolved into 155 steps (72 synapomorphies and 83 homoplasies and reversals). The following sequenced phylogenctic classification is proposed: Pandaloidea; Pandalidae; Pantominae subfam.n.; Notopandalus [N. magnoculus]; Peripandalus [P. serratus]; Pantomus; P. ajfinis; P. parvulus; Pandalinae; Austropandalini trib.n.; Austropandalus [A. grayi]; Pandalina; P. brevirostris; P. profunda; Pandalini; Dichdopandalus; D. bonnieri; D. leptorerus; Pandalus: “Plcsionikidae” [“Plesionika”]; Heterocarpidae [Heterocarpus]; Heterocarpoididae fam.n. [Heterocarpoides] [H. levicarina]; Dorodoteidae fam.n. [Dorodotes] [D. reflexus]; Thalassocarididae; Chlorotocus; C. crassicornis; C. novaezelandiae; Chlorotocoides [C. spinicauda]; Thalassocaris;, T. obscura; T. crimia; T. lucida; Physetocandidae; Stylopandalus [S. richardi]; Chlorotocella; C. gracilis; C. leptorhjnehus; Physetocaris [P. microphthalma]; Chlorocurtis [C. jactans]; Anachlorocurtis [A, commensalis]; Miropandalus [M. hardingi]. Quotation marks indicate taxa of uncertain systematic status. Square brackets indicate redundant, phylogenetically uninformative, genus and species-level taxa maintained in the classification to comply with the principle of binominal nomenclature.  相似文献   

7.
Chromosome counts are reported for 126 taxa representing 122 species and 61 genera of Compositae. First reports include two genera, Stylocline (n = 14) and Chromolepis (n = 19), 17 species, two infraspecific taxa, and one interspecific hybrid. Five additional taxa have chromosome numbers differing from previously published accounts. Carminatia is reinstated to generic status.  相似文献   

8.
Serological techniques of double diffusion (Ouchterlony) and nephelometry (Boyden Procedure) were employed to analyze the serological correspondence of taxa belonging to the Caprifoliaceae with selected taxa belonging to the Rubiaceae and the Cornaceae. Cornus (Cornaceae) exhibited relatively high correspondence with most representatives of the Caprifoliaceae, especially with Sambucus. The correspondence of Viburnum with Cornus was low. The serological correspondence of genera of the Caprifoliaceae with three genera of the Rubiaceae was relatively low indicating that these two families are serologically distinct. The correspondence between the Caprifoliaceae and the Cornaceae suggests a closer relationship between these two families than between the Caprifoliaceae and the tested genera of the Rubiaceae. These limited data suggest that the Rubiaceae and the Caprifoliaceae should not be placed in one taxonomic order. However, the serological variation for additional taxa within the Rubiaceae must be ascertained before more conclusive statements can be made relative to the degree of serological similarity between the two families.  相似文献   

9.
Dinoflagellates are a highly diverse and environmentally important group of protists with relatively poor resolution of phylogenetic relationships, particularly among heterotrophic species. We examined the phylogeny of several dinophysiacean dinoflagellates using samples collected from four Atlantic sites. As a rule, 3.5 kb of sequence including the nuclear ribosomal genes SSU, 5.8S, LSU, plus their internal transcribed spacer (ITS) 1 and 2 regions were determined for 26 individuals, including representatives of two genera for which molecular data were previously unavailable, Ornithocercus F. Stein and Histioneis F. Stein. In addition, a clone library targeting the dinophysiacean ITS2 and LSU sequences was constructed from bulk environmental DNA from three sites. Three phylogenetic trees were inferred from the data, one using data from this study for cells identified to genus or species (3.5 kb, 28 taxa); another containing dinoflagellate SSU submissions from GenBank and the 12 new dinophysiacean sequences (1.9 kb, 56 taxa) from this study; and the third tree combing data from identified taxa, dinophysiacean GenBank submissions, and the clone libraries from this study (2.1 kb, 136 taxa). All trees were congruent and indicated a distinct division between the genera Phalacroma F. Stein and Dinophysis Ehrenb. The cyanobionts containing genera Histioneis and Ornithocercus were also monophyletic. This was the largest molecular phylogeny of dinophysoid taxa performed to date and was consistent with the view that the genus Phalacroma may not be synonymous with Dinophysis.  相似文献   

10.
Abstract Leptophlebiidae is among the largest and most diverse groups of extant mayflies (Ephemeroptera), but little is known of family‐level phylogenetic relationships. Using two nuclear genes (the D2 + D3 region of 28S ribosomal DNA and histone H3) and maximum parsimony (MP), maximum likelihood (ML) and Bayesian inference (BI), we inferred the evolutionary relationships of 69 leptophlebiids sampled from six continents and representing 30 genera plus 11 taxa of uncertain taxonomic rank from Madagascar and Papua New Guinea. Although we did not recover monophyly of the Leptophlebiidae, monophyly of two of the three leptophlebiid subfamilies, Habrophlebiinae and Leptophlebiinae, was recovered with moderate to strong support in most analyses. The Atalophlebiinae was rendered paraphyletic as a result of the inclusion of members of Ephemerellidae or the Leptophlebiinae clade. For the species‐rich Atalophlebiinae, four groups of taxa were recovered with moderate to strong branch support: (i) an endemic Malagasy clade, (ii) a Paleoaustral group, a pan‐continental cluster with members drawn from across the southern hemisphere, (iii) a group, uniting fauna from North America, southeast Asia and Madagascar, which we call the Choroterpes group and (iv) a group uniting three New World genera, Thraulodes, Farrodes and Traverella. Knowledge of the phylogenetic relationships of the leptophlebiids will aid in future studies of morphological evolution and biogeographical patterns in this highly diverse and speciose family of mayflies.  相似文献   

11.
ABSTRACT

A comparative chemometric study of three taxa of the genus Scabiosa L. s. lato (Dipsacaceae) from Greece, treated so far as separate genera by some authors and as separate sections of a single genus by others, was carried out. The HPLC chemical fingerprint, based on several phenolic compounds (flavonoids and caffeic acid), was investigated in the three a forementioned taxa. The results support the contention that there is a close relationship between S. atropurpurea subsp. maritima and S. tenuis, and that S. argentea seems to be well separated from the other two taxa.  相似文献   

12.
This is the first genus‐level phylogeny of the subfamily Mynogleninae. It is based on 190 morphological characters scored for 44 taxa: 37 mynoglenine taxa (ingroup) representing 15 of the 17 known genera and seven outgroup taxa representing the subfamilies Stemonyphantinae, Linyphiinae (Linyphiini and Micronetini), and Erigoninae, and a representative of the family Pimoidae, the sister‐group to Linyphiidae. No fewer than 147 of the morphological characters used in this study are new and defined for this study, and come mainly from male and female genitalia. Parsimony analysis with equal weights resulted in three most parsimonious trees of length 871. The monophyly of the subfamily Mynogleninae and the genera Novafroneta, Parafroneta, Laminafroneta, Afroneta, Promynoglenes, Metamynoglenes, and Haplinis are supported, whereas Pseudafroneta is paraphyletic. The remaining seven mynoglenine genera are either monotypic or represented by only one taxon. Diagnoses are given for all genera included in the analysis. The evolution of morphological traits is discussed and we summarize the diversity and distribution patterns of the 124 known species of mynoglenines. The preferred topology suggests a single origin of mynoglenines in New Zealand with two dispersal events to Africa, and does not support Gondwana origin.  相似文献   

13.
Phylogenetic relationships among 31 species representing variously Helianthus, Helianthopsis, Heliomeris, Simsia, Viguiera, and Tithonia were assessed by chloroplast DNA restriction site mapping. A total of 147 mutations including 92 informative ones was detected using 16 restriction enzymes, with an estimated sequence divergence within the group of 1.4%. Parsimony analysis produced a single most parsimonious tree with a length of 161 steps and a consistency index of 0.91. Statistically significant clades, as assessed by the bootstrap method, correspond to a number of taxa recognized previously, including Helianthus (3 species), Helianthopsis (5 species), and several groups within Viguiera, including sect. Maculatae (4 species), the Baja California group (6 species), sect. Paradosa (2 species) and V. dentata (3 samples). However, species of Viguiera collectively form a highly paraphyletic group relative to species of other genera. Helianthus and Helianthopsis were separated into different clades, supporting their recent segregation. Placement of H. porteri in Helianthus rather than Heliomeris was confirmed; the single sample of the latter genus was most similar to the Baja California group of Viguiera. An expected relationship between Simsia (2 species) and one member of Viguiera ser. Grammatoglossae was confirmed (although not with two other putatively related members of Viguiera) and an unexpected relationship between Simsia and Tithonia was suggested. The presence of Mexican taxa as the more basal groups in the tree points toward a possible Mexican origin for Viguiera and related genera. A molecular clock hypothesis is rejected in many pairwise comparisons involving woody taxa with herbaceous ones, although it could not be rejected in most pairwise comparisons involving taxa of similar habit.  相似文献   

14.
Benthic diatoms as indicators of eutrophication in tropical streams   总被引:1,自引:0,他引:1  
Diatoms are frequently used as indicators of eutrophication in temperate systems, but little is known about their application to impacted African tropical systems. Five streams located within Gombe Stream National Park and five streams supporting human settlements draining into Lake Tanganyika, East Africa, were investigated for species composition, richness and diversity of epilithic algae. In addition, a trophic diatom index (TDI) developed for monitoring European rivers was applied to these tropical systems. 54 specific and infraspecific diatom taxa representing 20 genera were identified for all sites with Achnanthes s.l., Gomphonema and Navicula s.l. being the most common genera. Species richness varied between 10 and 21 in disturbed streams and 13 and 19 in undisturbed streams. Nutrients were significantly enriched in streams draining the deforested watersheds but indices of diversity and evenness (Shannon H, J and Simpson–Yule D, E) did not show any significant differences between streams in forested and deforested watersheds. Significant differences were observed between pooled data for the TDI between forested and deforested watersheds. Analysis of percent pollution tolerant diatom taxa indicates that organic pollution of streams in deforested watersheds may be contributing to eutrophication. This study shows that African diatoms, cosmopolitan or resembling well-known North American and European taxa, allows for trophic indices tailored to the autecological preferences of species to be applied to new regions, although intensive studies on these African taxa will lead to more accurate results. Measures of species-richness and diversity, historically used to describe the state of an ecosystem, may not be suitable to evaluate streams which are not grossly polluted. Electronic supplementary material Electronic supplementary material is available for this article at and accessible for authorised users.  相似文献   

15.
Observations were made in North‐East Mato Grosso on eleven species of Cryphalini (Scolytidae) in the genera Cryptocarenus, Hypothenemus and Periocryphalus. Their distribution and host plants are discussed. Most species are probably polyphagous. Species in the genera Cryptocarenus and Periocryphalus are normally shoot borers making biramous longitudinal galleries in the pith of small twigs. C. heveae also attacks fruits. The habits of Hypothenemus species are more varied. H. bolivianus is a shoot borer. H. eruditus was found below bark, but it is known to have very varied habits. H. cylindricus was bred from stems, and H. obscurus was found attacking fruits, but both species are known to breed in either habitat.  相似文献   

16.
We investigated recolonization by insects of a small headwater stream in the southern Appalachian Mountains that was treated along its entire length with an insecticide (methoxychlor). Initial treatment (December 1985) resulted in massive insect drift. Applications continued seasonally for three years, and drift was measured during each treatment. Taxonomic composition of the drift indicated several responses: (1) Some taxa were eliminated. (2) A number of taxa occurred only sporadically following initial treatment. (3) Early instars for some taxa showed seasonal occurrences which closely paralleled known life cycles and flight periods of adults. Groups which provided strong evidence for aerial recolonization included several Ephemeroptera, Plecoptera (Peltoperlidae and Isoperla spp.), and Trichoptera (Parapsyche cardis, Diplectrona modesta, Pycnopsyche spp., and Lepidostoma spp.). (4) Some long-lived taxa survived and exhibited distinct growth through several treatment periods. These include Odonata (Lanthus and Cordulegaster), some Ephemeroptera, and some Diptera (Tipulidae, Ceratopogonidae, and Tanypodinae). (5) Some taxa which were not present at the time of initial treatment appeared during the experiment. Chironomidae dominated the drift in all samples, and the number of genera did not decrease during the three-year treatment period. Of the 27 chironomid genera identified, only Micropsectra decreased in proportional abundance during treatment. In contrast, several genera (Corynoneura, Meropelopia, Parametriocnemus, and Tvetnia) showed little change in relative abundance. Larsia (Tanypodinae) increased in proportional abundance during the treatment period.  相似文献   

17.
Phylogenetic analyses of 33 genera of Rubiaceae were performed using morphological and a few chemical characters. Parsimony analysis based on 29 characters resulted in eight equally parsimonious trees, with a consistency index of 0.40 and a retention index of 0.69. These results were compared to a phylogenetic analysis of the same genera based on chloroplast DNA restriction site data. There are discrepancies between the two analyses, but if we consider groupings reflected in the present classification there is much congruency. With the exception of four genera, all the genera are positioned in the same group of taxa in the two analyses. Clades of taxa representing three of the four subfamilies (~the Antirheoideae, ~the Rubioideae, and the ~Ixoroideae) are monophyletic, while the fourth subfamily Cinchonoideae is shown to be paraphyletic. Both analyses support a widened tribe Chiococceae, including the former subtribe Portlandiinae (Condamineeae). Furthermore, in both analyses the tribe Hamelieae is placed outside the subfamily Rubioideae where it is now housed. In search for the most plausible sister group to the Rubiaceae, the genus Cinchona (Rubiaceae) was analyzed together with 13 genera of the Loganiaceae, Nerium (Apocynaceae), and Exacum (Gentianaceae). Cornus (Comaceae), Olea (Oleaceae), and these two genera together were used as outgroups. The analysis, including 25 characters, 16 taxa, and with Cornus and Olea together as an outgroup, resulted in four equally parsimonious trees, with a consistency index of 0.53 and a retention index of 0.62. The non-Loganiaceae taxa Cinchona (Rubiaceae), Nerium (Apocynaceae), and Exacum (Gentianaceae) were all found to have their closest relatives within the Loganiaceae indicating that the Loganiaceae are paraphyletic and ought to be reclassified. As a result of the morphological data the most plausible sister group to the Rubiaceae is the tribe Gelsemieae of the Loganiaceae.  相似文献   

18.
Abstract : The mechanisms regulating the compartmentation of acetylcholine (ACh) and the relationship between transmitter release and ACh stores are not fully understood. In the present experiments, we investigated whether the inhibitors of serine/threonine phosphatases 1 and 2A, calyculin A and okadaic acid, alter subcellular distribution and the release of ACh in rat hippocampal slices. Calyculin A and okadaic acid significantly (p < 0.05) depleted the occluded ACh of the vesicular P3 fraction, but cytoplasmic ACh contained in the S3 fraction was not significantly affected. The P3 fraction is known to be heterogeneous ; calyculin A and okadaic acid reduced significantly (p < 0.05) the amount of ACh recovered with a monodispersed fraction (D) of synaptic vesicles, but the other nerve terminal bound pools (E-F and G-H) were not so affected. K+-evoked ACh release decreased significantly (p < 0.01) in the presence of calyculin A and okadaic acid, suggesting that fraction D's vesicular store of ACh contributes to transmitter release. The loss of ACh from synaptic vesicle fractions prepared from tissue exposed to phosphatase inhibitors appeared not to result from a reduced ability to take up ACh. Thus, when tissue was allowed to synthesize [3H]ACh from [3H]choline, the ratio of [3H]ACh in the S3 to P3 fractions was not much changed by exposure of tissue to calyculin A or okadaic acid ; furthermore, the specific activity of ACh recovered from the D fraction was not reduced disproportionately to that of cytosolic ACh. The changes are considered to reflect reduced synthesis of ACh by tissue treated with the phosphatase inhibitors, rather than an effect on vesicle uptake mechanisms. Thus, exposure of tissue to calyculin A or okadaic acid appears to produce selective depletion of tissue ACh content in a subpopulation of synaptic vesicles, suggesting that phosphatases play a role in ACh compartmentation.  相似文献   

19.
The putative ectomycorrhizal fungal species registered from sporocarps associated with ponderosa pine and Douglas-fir forests in their natural range distribution (i.e., western Canada, USA, and Mexico) and from plantations in south Argentina and other parts of the world are listed. One hundred and fifty seven taxa are reported for native ponderosa pine forests and 514 taxa for native Douglas-fir forests based on available literature and databases. A small group of genera comprises a high proportion of the species richness for native Douglas-fir (i.e., Cortinarius, Inocybe, and Russula), whereas in native ponderosa pine, the species richness is more evenly distributed among several genera. The comparison between ectomycorrhizal species richness associated with both trees in native forests and in Patagonia (Argentina) shows far fewer species in the latter, with 18 taxa for the ponderosa pine and 15 for the Douglas-fir. Epigeous species richness is clearly dominant in native Douglas-fir, whereas a more balanced relation epigeous/hypogeous richness is observed for native ponderosa pine; a similar trend was observed for Patagonian plantations. Most fungi in Patagonian Douglas-fir plantations have not been recorded in plantations elsewhere, except Suillus lakei and Thelephora terrestris, and only 56% of the fungal taxa recorded in Douglas-fir plantations around the world are known from native forests, the other taxa being new associations for this host, suggesting that new tree + ectomycorrhizal fungal taxa associations are favored in artificial situations as plantations.  相似文献   

20.
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