五种缘毛类纤毛虫遗传关系的ISSR研究

应用ISSR分子标记揭示了5种缘毛类纤毛虫(Carchesium polypinum,Epistylis chrysemydis,E.plicatilis,E.urceolata和Vorticella campanula)的遗传关系.从34个引物中筛选到13个多态性高的引物进行研究.得到的遗传距离(0.666 7～1.000 0)显示ISSR技术具有较高的分辨率.依据构建的UPGMA聚类树,V.campanula首先和其他种类分开;C.polypinum和E.chrysemydis聚在了一起;在3种Epistylis纤毛虫中,E.plicatilis和E.urceolata聚在了一起.对比由核糖体小亚基RNA基因序列构建的系统发育树,发现:1)ISSR引物在缘毛类纤毛虫基因组中可以得到多态扩增;2)C.polypinum与Epistylis的关系近于V.campanula,在缘毛类纤毛虫分类中,单生或群居是重要的系统发育特征;3)E.plicatilis和E.urceolata的关系近于E.chrysemydis.在Epistylis属纤毛虫中,柄的中空与否是一个有用的系统发育和分类特征.本研究表明ISSR方法在纤毛虫相近和相似种遗传关系研究中是一种新的有用方法.     

A molecular phylogenetic investigation of zoothamnium (ciliophora, peritrichia, sessilida)

The gene coding for 18S small subunit ribosomal RNA (ssu rRNA) was sequenced in seven free-living, marine species of the sessiline peritrich genus Zoothamnium. These were Zoothamnium niveum, Zoothamnium alternans, Zoothamnium pelagicum, and four unidentified species. The ssu rRNA gene also was sequenced in Vorticella convallaria, Vorticella microstoma, and in an unidentified, freshwater species of Vorticella. Phylogenetic trees were constructed using these new sequences to test a previously published phylogenetic association between Zoothamnium arbuscula, currently in the family Zoothamniidae, and peritrichs in the family Vorticellidae. Trees constructed by means of neighbor-joining, maximum parsimony, maximum likelihood, and Bayesian inference methods all had similar topologies. The seven new sequences of Zoothamnium species grouped into three well-supported clades, each of which contained a diversity of morphological types. The three clades formed a poorly supported, larger clade that was deeply divergent from Z. arbuscula, which remained more closely associated with vorticellid peritrichs. It is apparent that Zoothamnium is a richly diverse genus and that a much more intensive investigation, involving both morphological and molecular data and a wider selection of species, will be necessary to resolve its phylogeny. A greater amount of molecular diversity than is predicted by morphological data exists within all major clades of sessiline peritrichs that have been included in molecular phylogenies, indicating that characteristics of stalk and peristomial structure traditionally used to differentiate taxa at the generic level and above may not be uniformly reliable.     

Morphological and Molecular Characterization of Some Peritrichs (Ciliophora: Peritrichida) from Tank Bromeliads, Including Two New Genera: Orborhabdostyla and Vorticellides

Using standard methods, we studied the morphology and 18S rDNA sequence of some peritrich ciliates from tank bromeliads of Costa Rica, Jamaica, and Ecuador. The new genus Orborhabdostyla differs from Rhabdostyla by the discoidal macronucleus. Two species from the literature and a new species from Ecuadoran tank bromeliads are combined with the new genus: O. previpes (Claparède and Lachmann, 1857) nov. comb., O. kahli (Nenninger, 1948) nov. comb., and O. bromelicola nov. spec. Orborhabdostyla bromelicola is a slender species with stalk-like narrowed posterior half and operculariid/epistylidid oral apparatus. An epistylidid relationship is also suggested by the gene sequence. Vorticella gracilis, described by Dujardin (1841) from French freshwater, belongs to the V. convallaria complex but differs by the yellowish colour and the number of silverlines. The classification as a distinct species is supported by the 18S rDNA, which differs nearly 10% from that of V. convallaria s. str. Based on the new data, especially the very stable yellowish colour, we neotypify V. gracilis with the Austrian population studied by Foissner (1979). Vorticella gracilis forms a strongly supported phyloclade together with V. campanula, V. fusca and V. convallaria, while Vorticellides astyliformis and Vorticella microstoma branch in a separate, fully-supported clade that includes Astylozoon and Opisthonecta. The new genus Vorticellides comprises five small (usually < 60 μm), barrel-shaped species with two epistomial membranes: V. aquadulcis (Stokes, 1887) nov. comb., V. astyliformis (Foissner, 1981) nov. comb., V. platysoma (Stokes, 1887) nov. comb., V. infusionum (Dujardin, 1841) nov. comb., and V. (Spinivorticellides) echini (King, 1931) nov. comb. Two of these species are redescribed in the present study: V. astyliformis and V. aquadulcis, which is neotypified with a Costa Rican population. Pseudovorticella bromelicola nov. spec. differs from the congeners by the location of the two contractile vacuoles and the number of silverlines.     

Phylogenetic relationships of the subclass Peritrichia (Oligohymenophorea, Ciliophora) inferred from small subunit rRNA gene sequences

The phylogenetic relationships among peritrichs remain unresolved. In this study, the complete small subunit rRNA (SSrRNA) gene sequences of seven species (Epistylis galea, Campanella umbellaria, Carchesium polypinum, Zoothamnium arbuscula, Vaginicola crystallina, Ophrydium versatile, and Opercularia microdiscum) were determined. Trees were constructed using distance-matrix, maximum-likelihood and maximum-parsimony methods, all of which strongly supported the monophyly of the subclass Peritrichia. Within the peritrichs, 1) E. galea grouped with Opercularia microdiscum and Campanella umbellaria but not the other Epistylis species, which indicates that the genus Epistylis might not be monophyletic; 2) the topological position of Carchesium and Campanella suggested that Carchesium should be placed in the family Zoothamniidae, or be elevated to a higher taxonomic rank, and that Campanella should be independent of the family Epistylididae, and probably be given a new rank; and 3) Opisthonecta grouped strongly with Astylozoon, which suggested that Opisthonecta species were not the ancestors of the stalked peritrichs.     

景观水体周丛生纤毛虫群落结构及其与环境因子的关系

为了解载玻片法获取的周丛生纤毛虫群落可否用于监测景观水体,于2015年利用载玻片采样法对上海东南角的一处景观水体的周丛生纤毛虫的群落结构进行了周年调查,并对其与环境因子之间的相关性进行了研究。共检出12目51种周丛生纤毛虫。周丛生纤毛虫的年平均密度为127.29个/cm~2,2月密度最低,为24.27个/cm~2,5月密度最高,为248.57个/cm~2;其群落结构应对水体环境的变化呈现显著的季节性变动。多元统计分析表明,总磷浓度和水温(T)均是影响周丛生纤毛虫群落结构的主要环境因子。作为周丛生纤毛虫最主要的类群,缘毛目纤毛虫的密度与透明度(SD)和电导率(Spc)呈显著正相关,与T呈极显著正相关;丁丁目、毛口目和侧口目纤毛虫的密度与SD呈显著负相关,其中丁丁目纤毛虫的密度与T呈极显著负相关;此外,丁丁目纤毛虫的密度与总氮(TN)浓度呈极显著正相关。冗余分析显示,优势种钟形钟虫、钟虫sp.2、聚缩虫sp.1、亨氏累枝虫、沟钟虫和螅状独缩虫的密度与环境因子具有较好相关性。研究表明,载玻片法采集的周丛生纤毛虫能很好的反映水质变化,该方法可以作为景观水体水质监测方法的一个补充。     

Fluctuations in Populations of 3 Vorticella Species from an Activated-Sludge Sewage Plant

SYNOPSIS. To evaluate Vorticella populations in an activated sludge sewage-disposal plant as a ) indicators and b ) contributors to purification, population behavior in the plant was compared with behavior in clonaI cultures maintained with mixed sludge microflora. In a 12-month survey of protozoa in the plant, of 37 spp recorded only 9—all ciliates—were indigenous. Ciliate populations fluctuated cyclically. Alternations in dominance of Vorticella convallaria (L.) with V. octava (Stokes) + V. aequitata (Kahl) apparently followed changes in bacterial activity as indicated by changes in reduction of biochemical oxygen demand and suspended solids of the wastes. This correlation of Vorticella and bacterial activities was also investigated with clonal populations of the vorticellas and their accompanying mixed microflora—the bacteria being isolated together with the vorticellas from sludge samples. The mixed microflora which consistently supported healthy vorticellas was predominantly proteolytic. Varying periods of dominance in Vorticella species thus indicated activity of their supporting microflora. Log-phase bacteria activity stimulated V. octava ; stationary and declining phases stimulated V. convallaria. Thus, V. octava appeared predatory and V. convallaria appeared to require bacterial conditioning of the medium. Bacterial activity was stimulated by V. octava predation. Vorticella activity may thus promote purification.     

Phylogenetic relationships of the subclass peritrichia (Oligohymenophorea, Ciliophora) with emphasis on the genus Epistylis, inferred from small subunit rRNA gene sequences

The peritrichs have been recognized as a higher taxon of ciliates since 1968. However, the phylogenetic relationships among them are still unsettled, and their placement within the class Oligohymenophorea has only been supported by the analysis of the small subunit rRNA gene sequence of Opisthonecta henneguyi. DNA was isolated directly from field-sampled species for PCR, and was used to resolve relationships within the genus Epistylis and to confirm the stability of the placement of peritrichs. Small subunit rRNA gene sequences of Epistylis plicatilis, Epistylis urceolata, Epistylis chrysemydis, Epistylis hentscheli, Epistylis wenrichi, and Vorticella campanula were sequenced and analyzed using both distance-matrix and maximum-parsimony methods. In phylogenetic trees, the monophyly of both the genus Episrylis and the subclass Peritrichia was strongly supported, while V. campanula clustered with Vorticella microstoma. The topology in which E. plicatilis and E. hentscheli formed a strongly supported sister clade to E. urceolata, E. chrysemydis, and E. wenrichi was consistent with variations in the thickness of the peristomial lip. We concluded that the peristomial area, especially the peristomial lip, might be the important phylogenetic character within the genus Epistylis.     

两种缘毛类纤毛虫胞质Hsp70基因序列的克隆及其系统发育分析

克隆得到2种缘毛类纤毛虫——钟形钟虫(Vorticella campanula)和螅状独缩虫(Carchesium polypinum)的胞质Hsp70基因部分序列,长度均为438bp,编码146个氨基酸。以细菌为外类群,利用最大似然法和邻接法构建包括其他5种纤毛虫在内的共26个物种的Hsp70基因氨基酸序列系统发育树,其拓扑结构显示：V．campanula和C．polypinum聚在一起,并与另2种寡膜纲的嗜热四膜虫(Tetrahymena thermophila)及草履虫(Paramecium tetraurelia)聚为姊妹枝,提示了缘毛类纤毛虫为单系,且隶属于寡膜纲的系统发育地位。     

Vorticella Linnaeus, 1767 (Ciliophora, Oligohymenophora, Peritrichia) is a grade not a clade: redefinition of Vorticella and the families Vorticellidae and Astylozoidae using molecular characters derived from the gene coding for small subunit ribosomal RNA

Recent phylogenetic analyses of the peritrich genus Vorticella have suggested that it might be paraphyletic, with one Vorticella species - Vorticella microstoma grouping with the swimming peritrichs Astylozoon and Opisthonecta in a distant clade. These results were based on very limited taxon sampling and thus could not be accepted as conclusive evidence for revising the generic classification. We tested paraphyly of the genus Vorticella by making a new analysis with a broad range of samples from three continents that yielded 52 new sequences of the gene coding for small subunit rRNA. Our results, together with the available sequences in Genbank, form a comprehensive set of data for the genus Vorticella. Analyses of these data showed that Vorticella microstoma morphotypes, Astylozoon, and Opisthonecta form a well-supported, monophyletic clade, that is distinct from and basal to the family Vorticellidae containing other species of Vorticella. Paraphyly of the genus Vorticella and family Vorticellidae was strongly confirmed by these results. Furthermore, the two clades of Vorticella identified by the SSU rRNA gene are so genetically diverse whereas the genetic distances within the one containing Vorticella microstoma morphotypes, Astylozoon, and Opisthonecta were so slight, which marked it as a separate family that must be defined by molecular characters in the absence of unifying morphological and morphogenetic characters. An emended characterization and status of the genus Vorticella, the families Vorticellidae and Astylozoidae are presented and discussed.     

Calcium-binding proteins in the vorticellid spasmoneme

The proteins of the contractile spasmoneme from Vorticella convallaria, Carcheslium polypinum, and Zoothamnium geniculatum have been extracted in the detergent, sodium dodecyl sulfate (SDS), as well as urea and guanidine hydrochloride (GuCl). After SDS extraction, the molecular weight distribution of the proteins was examined by means of SDS-polyacrylamide gel electrophoresis. Significant amounts of material corresponding to the contractile proteins actin and tubulin are not present. The contractile organelles in the three species examined contain a group of closely related proteins of molecular weight near 20,000, which constitute a major part (40-60%) of the dry mass. The 20,000 mol wt proteins in Zoothamnium bind calcium with high affinity (pK congruent to 6) and are termed "spasmins." By means of urea polyacrylamide gel electrophorsis, it is demonstrated that in Carchesium and Zoothamnium certain spasmin components bind calcium even in the presence of 6 M urea. The binding of calcium in 6 M urea suggests a functional relationship between the spasmins and the calcium-binding proteins of striated muscle which behave similarly. The calcium binding in urea also indicates that the spasmins within a single spasmoneme have different calcium affinities, and this difference in calcium-binding properties may be an important factor in the physiological function of the organelle.     

Morphology, biometry and taxonomic position of two peritrich ciliate Protozoa found in activated sludge

The morphology of two sessile peritrich species taken from a plant for the processing of activated sludge is described. One of these species, having a non-contractile, branched peduncle, belongs to the genus, Heteropolaria, and the other having a single, contractile stalk, is a member of the genus Vorticella. A statistical and biometric study is made of their morphological characteristics, and the taxonomic position of both ciliates is discussed.     

A comparative study of the sessile,filter-feeding ciliates of several small streams

Artificial substrates, consisting of strips of nylon cloth, were used to sample sessile, filter-feeding ciliates at eleven stream sites. These ciliates were common (61 % of samples) and frequently abundant (mean = 95 cm^?2). Populations varied widely, even within stream sites, and mean abundance was not related to subjective assessments of the sites. Permanent rural streams and streams below reservoirs, which have relatively stable flow regimes, had a peritrich fauna dominated byVorticella campanula along withCarchesium polypinum andV. striata. Urban and intermittent streams, with less stable flow regimes, showed an increasing number of peritrichs with non-contractile stalks, particularlyEpistylis plicatilis. The commonness and diversity of peritrichs was positively related to aufwuchs stability.     

The Abundance of Different Peritrich Ciliates on Stone Surfaces in Contrasting Lowland Streams Throughout the Year

ABSTRACT. Pentrich ciliates attached to small stones from the beds of two streams, one large with hard water, the other small with soft water, were enumerated throughout an annual cycle. Throughout the year, Platycola was the dominant peritrich in both streams, except for a brief period during the spring when Vorticella and Carchesium predominated. Vorticella reached peak levels of 89 ciliates cm² of stone surface, and up to 102 Platycola per cm² of stone surface were found. Mean volumes of samples of the main species were calculated, and used to estimate the standing stock biomasses. using a standard value of dry weight per unit volume. Published values of the growth rates of representatives of the main genera were used to estimate production values, which totalled about 6.5 g dry weight of peritrich cytoplasm/m² of stream bed per annum in the large stream (mean annual density = 8.3 peritrichs/cm² of stone surface), and 33 g dry weight/m² of stream bed per annum in the small stream (mean annual density = 47 peritrichs/cm² of stone surface). Food supply, temperature and predation were the primary factors determining peritrich abundance     

Phylogeny of the Rumen Ciliates Entodinium, Epidinium and Polyplastron (Litostomatea: Entodiniomorphida) Inferred from Small Subunit Ribosomal RNA Sequences

ABSTRACT. Three complete 18S ribosomal RNA gene sequences from the rumen ciliates, Entodinium coudatum (1,639 bp), Epidinium caudarum (1,638 bp), and Polyplastron multivesiculatum (1,640 bp) were determined and confrimed in the opposite direction. Trees produced using maximum parsimony and distance-matrix methods (lest squares and neighbour-joining). with strong bootstrap support, depict the rumen ciliates as a monophyletic group, Entodinium caudatum is the earliest branching rumen ciliate. However, Entodiniwn simplex does not pair with En. caudatum , but rather with Polyplastron multivesiculatum. Signature sequences for these rumen ciliates reveal that the published SSrRNA gene sequence from En. simplex is in fact a Polyoplastron species. The free-living haptorian ciliates, Loxophyllum, Homalozoon and Spathidium (Subclass Hoptoria), are monophyletic and are the sister group to the rumen cilates. The litostomes (class Litostomatea), consisting of the haptorians and the rumen ciliates, are also a monophyletic group.     

Phylogenetic position of Licnophora,Lechriopyla, and Schizocaryum,three unusual ciliates (phylum Ciliophora) endosymbiotic in echinoderms (phylum Echinodermata)

Various echinoderms are colonized by species from several classes of the Phylum Ciliophora, indicating that the echinoderm "habitat" has been invaded independently on numerous occasions throughout evolutionary history. Two "echinoderm" ciliates whose phylogenetic positions have been problematic are Licnophora macfarlandi Stevens, 1901 and Schizocaryum dogieli Poljansky and Golikova, 1957. Licnophora macfarlandi is an endosymbiont of the respiratory trees of holothuroids, and S. dogieli is found in the esophagus of echinoids. A third species, Lechriopyla mystax Lynch, 1930, is a plagiopylid ciliate found in the intestine of echinoids. Host echinoderms were collected near the Friday Harbor Laboratories, San Juan Island, WA. Specimens of S. dogieli and L. mystax were obtained from the esophagus and intestine, respectively, of the sea urchin Strongylocentrotus pallidus. Specimens of L. macfarlandi were collected from the fluid obtained from the respiratory trees of Parastichopus californicus. Using small subunit ribosomal RNA (SSrRNA) sequences of these three ciliates and a global alignment of SSrRNA sequences of other ciliates, we established the following. 1) Licnophora is a spirotrich ciliate, clearly related to the hypotrichs and stichotrichs; this is corroborated by its possession of macronuclear replication bands. 2) Lechriopyla is the sister genus to Plagiopyla and is a member of the Class Plagiopylea, which was predicted based on its cytology. 3) Schizocaryum clusters in the Class Oligohymenophorea and is most closely related to the scuticociliates; there are currently no morphological features known to relate Schizocaryum to the scuticociliates.     

Effect of Algal Exudates on Substratum Selection by Motile Telotrochs of the Marine Peritrich Ciliate Vorticella marina

SYNOPSIS. Several species of marine peritrichs are found as epiphytes on small strands of filamentous green and red algae affixed to the substratum of marine intertidal rock pools. In pools located along the coast of Narragansett Bay, the motile vorticellid telotrochs appear to show a substratum selection for specific algae. Exudation products by marine algae have distinct differences; some Phaeophyta have particularly high values for dissolved organic matter (DOM), and for phenolic compounds. Algal exudates appear to influence population growth of vorticellids. The mean survival percentage of vorticellid populations increased with exposure to exudates from Cladophora gracilis, Polysiphonia harveyi and Polysiphonia lanosa ; and decreased with exposure to those of Ascophyllum nodosum, Fucus spiralis and Scytosiphon lomentaria. Telotroch settlement of Vorticella marina was enhanced by exudates of Cladophora gracilis, Polysiphonia harveyi and Polysiphonia lanosa , but was reduced by exudates of Ascophyllum nodosum , and was prevented by exudates of Fucus spiralis and Scytosiphon lomentaria .
Algal exudates were obtained by allowing photosynthetic activity of the experimental algae for 6 hr. The exudates were filtered and the concentration of DOM, total phenols and carbohydrates determined. The filtered seawater containing the exudate was placed in a box-type plastic dish on which the vorticellids had colonized. Survival percentages and the percentage of population due to telotroch settlement were calculated. This investigation indicates that algal exudates may exert a significant influence on the selection of substrata by vorticellid telotrochs and suggests that the ecologic stability of a given rock pool may be considerably lessened by a high level of Phaeophtya and the consequent reduction of Aufwuchs species.     

Hysteresis of Contraction-Extension Cycle of Glycerinated Vorticella

SYNOPSIS. The helical coiling state of a glycerinated stalk in the family Vorticellidae had been regarded, without any evidence, as a reversible and completely equilibrated mechano-chemical system regulated by the external free Ca²⁺ concentration. Our present detailed observations of many individual stalks of glycerinated Vorticella convallaria revealed that the contraction-extension cycle of the helical stalks caused by increasing and decreasing free Ca²⁺ concentrations in the medium represents a kind of hysteresis. This phenomenon was observed in extensively glycerinated Vorticella in a medium of very low or physiological ionic strength, as well as in briefly glycerinated ciliates. With regard to the configurational change in various parts of a glycerinated stalk during the contraction-extension cycle, it was found that the initial bending of the stalk caused by increasing free Ca²⁺ concentration begins to take place near the zooid (head) while the initial reextension of the stalk with decreasing free Ca²⁺ concentration begins to take place near the zooid (head) while the initial reextension of the stalk with decreasing free Ca²⁺ concentration takes place simultaneously throughout the entire stalk. The Ca²⁺ threshold for complete reextension of the part of the stalk near the rootlet was found to be much higher than that near the zooid.     

Growth and survival of peritrich ciliates in an urban stream

Summary A computerized system was devised to trace the attachment, growth and disappearance of peritrich ciliates in an urban river. By tracing the development of each Carchesium polypinum colony in the river, it was possible to estimate the actual growth rate of this species without considering the effect of immigration. The survival and colonization rates of the colonies and individuals of solitary species could also be estimated. C. polypinum showed high growth rates (r=1.370 day^-1, doubling time 12.14 h). The number of daily colonizers also increased at a high rate, and the combination of growth and colonization caused very high population increase rates at the area level. Because of its low survivorship, the rate of Vorticella microstoma increase was much lower than previously reported. The survival of solitary species and small colonies was lower than with large colonies, and fewer new colonizers survived with the development of the attached microbial community.     

Growth of the peritrich epibiont Zoothamnium intermedium Precht, 1935 (Ciliophora, Peritrichia) estimated from laboratory experiments

Peritrich ciliates are commonly found colonizing living substrates. Although this a well known phenomenon, biological aspects of this relationship need to be studied in more detail. Assessment of growth rates in peritrichs has been the subject of very few studies. Only species in the genera Carchesium Ehrenberg, 1830 and Vorticella Linnaeus, 1767 had their growth rates evaluated in the field and in the laboratory. In the present study, growth, colonization (colonies/host), and proliferation (zooids/colony) rates of the peritrich epibiont Zoothamnium intermedium Precht, 1935 attached to the calanoid copepod Acartia tonsa Dana 1848 were evaluated in the laboratory in two food regimes: bacteria only, and algal based diet. Results showed that growth, colonization, and proliferation rates were similar for both diets. Maximum growth rates obtained for Z. intermedium was 0.85 and 0.83 per day, for bacteria and algae respectively. Maximum colonization rates were 0.5 per day for both diets, and the maximum proliferation rates were 0.44 and 0.42 per day for bacteria and algae respectively. These results demonstrate that Z. intermedium is able to grow at the same rate of other peritrichs on bacterial and algal based diets.