Predicting the structure of larval fish assemblages by a hierarchical classification of meteorological and water column forcing factors

The first step in building predictive models of larval fish assemblages is to identify the main environmental parameters which influence their spatial and temporal structure. In this study, multivariate regression trees (MRT) were used to classify hierarchically the effects of large-scale meteorological factors and small-scale water column factors on pre-settlement larval fish assemblages at two sites in the lagoon at New Caledonia, southwest Pacific. The environmental conditions at one site were highly variable spatially and temporally, but varied little at the other. In spite of these differences, MRT models revealed that identical forcing factors influenced the structure of larval fish assemblages at both sites, with a similar hierarchy, but a different statistical efficiency. At a large spatial scale, the seasonal variabilities in sun hours and wind (speed and/or direction) explained 14% and 64% of the structure of larval fish assemblages at the sites of high and low variability, respectively. At a small spatial scale, the seasonal variability in mean surface water temperature, followed by the concentration in Chl a, explained 22% and 62% of the structure of assemblages at the sites of high and low variability, respectively. The Dufrêne–Legendre index matched characteristic families of larvae to each set of environmental conditions, and illustrated the role of sheltered, Chl a enriched, coastal waters in producing a families-rich assemblage of fish larvae, some species of which are targeted by fishing. This study shows that it may be possible to use environmental data, and predictions computed from MRT to design spatially explicit models of larval fish distribution in coral-reef lagoons.     

Temporal variability in the spatial and environmental determinants of functional metacommunity organization – stream fish in a human‐modified landscape

1. Quantifying the relative importance of environmental filtering versus regional spatial structuring has become an intensively studied area in the context of metacommunity ecology. However, most studies have evaluated the role of environmental and spatial processes using taxonomic data sets of single snapshot surveys. 2. Here, we examined temporal changes in patterns and possible processes behind the functional metacommunity organization of stream fishes in a human‐modified landscape. Specifically, we (i) studied general changes in the functional composition of fish assemblages among 40 wadeable stream sites during a 3‐year study period in the catchment area of Lake Balaton, Hungary, (ii) quantified the relative importance of spatial and environmental factors as determinants of metacommunity structure and (iii) examined temporal variability in the relative role of spatial and environmental processes for this metacommunity. 3. Partial triadic analysis showed that assemblages could be effectively ordered along a functional gradient from invertebrate consuming species dominated by the opportunistic life‐history strategy, to assemblages with a diverse array of functional attributes. The analysis also revealed that functional fish assemblage structure was moderately stable among the sites between the sampling periods. 4. Despite moderate stability, variance partitioning using redundancy analyses (RDA) showed considerable temporal variability in the contribution of environmental and spatial factors to this pattern. The analyses also showed that environmental variables were, in general, more important than spatial ones in determining metacommunity structure. Of these, natural environmental variables (e.g. altitude, velocity) proved to be more influential than human‐related effects (e.g. pond area, % inhabited area above the site, nutrient enrichment), even in this landscape with relatively low variation in altitude and stream size. 5. Pond area was, however, the most important human stressor variable that was positively associated with the abundance of non‐native species with diverse functional attributes. The temporal variability in the relative importance of environmental and spatial factors was probably shaped by the release of non‐native fish from fish ponds to the stream system during flood events. 6. To conclude, both spatial processes and environmental control shape the functional metacommunity organization of stream fish assemblages in human‐modified landscapes, but their importance can vary in time. We argue, therefore, that metacommunity studies should better consider temporal variability in the ecological mechanisms (e.g. dispersal limitation, species sorting) that determine the dynamics of landscape‐level community organization.     

Resilience of fishes and invertebrates to prolonged drought in two California streams

Long-term data are needed to assess spatial and temporal variability of communities and their resilience to natural and anthropogenic disturbances, particularly in climatic regions marked by high interannual variability (e.g. mediterranean-climate). A long-term study at four sites on two streams in mediterranean-climate California (annual sampling over 20  yr) allowed us to quantify the influence of a 5-yr prolonged drought on stream invertebrate and fish communities. Invertebrate community composition did not show recovery following drought. The primary environmental factors influencing community composition, identified through principle components and multiple correspondence analyses were precipitation and flow permanence. Invertebrate taxon richness and abundance exhibited few responses (some site specific) and recovered quickly. Native fish abundance was lowest during the drought period and highest during the wet years that occurred at the end of the study period. Importantly, the prolonged drought facilitated the establishment and success of the invasive green sunfish (Centrarchidae: Lepomis cyanellus ) that was then resilient to subsequent large flow events. There was high spatial synchrony in the temporal changes among all four sites, and three distinct periods were identified: early drought, late drought, and post-drought years. However, we still found differences among sites along the flow permanence gradient from temporary to perennial in the response to drought of both invertebrate and fish assemblages likely as a result of changes in substrate, vegetation, and other habitat characteristics. The observed lack of resilience and negative impacts to biodiversity due to prolonged drought associated with long-term habitat changes is important because hydroclimatic extremes are predicted to increase in frequency and magnitude with global climate change.     

Molecular and morphological evidence for conspecificity of two common Indo-Pacific species of Palythoa (Cnidaria: Anthozoa)

Most studies characterize metacommunities based on a single snapshot of the spatial structure, which may be inadequate for taxa with high migratory behavior (e.g., fish). Here, we applied elements of metacommunity structure to examine variations in the spatial distributions of stream fishes over time and to explore possible structuring mechanisms. Although the major environmental gradients influencing species distributions remained largely the same in time, the best-fit pattern of metacommunity structure varied according to sampling occasion and whether or not we included non-native species in the analyses. Quasi-Clementsian and Clementsian structures were the predominant best-fit structures, indicating the importance of species turnover among sites and the existence of more or less discrete community boundaries. The environmental gradient most correlated with metacommunity structure was defined by altitude, area of artificial ponds in the catchment, and dissolved oxygen content. Our results suggest that the best-fit metacommunity structure of the native species can change in time in this catchment due to seasonal changes in distribution patterns. However, the distribution of non-native species throughout the landscape homogenizes the temporal variability in metacommunity structure of native species. Further studies are necessary from other regions to examine best-fit metacommunity structures of stream fishes within relatively short environmental gradients.     

Importance of temporal variability at different spatial scales for diversity of floodplain aquatic communities

相似文献   

Spatial and temporal variations in nematode assemblages in tropical seagrass sediments

The changes in the community dynamics of infaunal nematodes associated with tropical Australian intertidal seagrasses at 4 estuarine sites were investigated through 3 seasons (autumn, winter and spring). Nematode densities were highest in winter in all but one of the sites, ranging from 1971 to 3084 inds./10 cm², with one site showing a highest density of 3411 inds./10 cm² in spring. Multiple regression revealed significant correlations between nematode density peaks and seasonal changes in temperature, salinity and surface seagrass cover. Non-metric Multi-Dimensional Scaling revealed that the communities were characterised by relatively low within-site spatial variability but relatively high temporal variability through the three seasons. This temporal variability was largely due to significant increases in abundance of epistrate-feeding species in winter and spring. An investigation of the dominant epistrate-feeding nematodes revealed that predominantly infaunal species were responsible for overall winter and spring density increases. This study provides further evidence of the role played by temperature in regulating tropical, intertidal meiobenthic communities but also indirectly provides evidence of micro-scale seagrass canopy effects (micro-algal supply and availability) that may further enhance the impacts of these larger-scale seasonal environmental changes on the infaunal nematode community.     

Temporal variation in phytoplankton beta diversity patterns and metacommunity structures across subtropical reservoirs

相似文献   

Associations between fish assemblages and environmental factors for Mediterranean-type rivers during summer

The structure of summer fish assemblages was examined along longitudinal gradients in 31 Mediterranean-type rivers of the middle Guadiana basin (south-west Iberian Peninsula), using data from 157 sites including small streams to deep rivers. An ordination analysis, based on 16 variables, was applied to species presence, using principal component and canonical correspondence analysis. The results for the habitat data were compared with those for the biological data using a Mantel analysis, and the agreement was highly significant. Spatial structure was considered by partitioning the total variability among the environmental and geographical variables. The fish assemblages showed longitudinal zoning during the summer, with species distributed over gradients of habitat size (depth), water quality (current and physico-chemical variables), and cover (substratum and vegetation), according to their adult size and life history. The size of the habitat that remained available in summer had the greatest biological effect, being the most important factor explaining fish species distribution and assemblage structure during this stressing season. Strictly spatial variation was low, but there was still a high residual variation. Habitat associations and life-history strategies are discussed for native and exotic species.     

Spatial predictability of juvenile fish species richness and abundance in a coral reef environment

Juvenile reef fish communities represent an essential component of coral reef ecosystems in the current focus of fish population dynamics and coral reef resilience. Juvenile fish survival depends on habitat characteristics and is, following settlement, the first determinant of the number of individuals within adult populations. The goal of this study was to provide methods for mapping juvenile fish species richness and abundance into spatial domains suitable for micro and meso-scale analysis and management decisions. Generalized Linear Models predicting juvenile fish species richness and abundance were developed according to spatial and temporal environmental variables measured from 10 m up to 10 km in the southwest lagoon of New Caledonia. The statistical model was further spatially generalized using a 1.5-m resolution, independently created, remotely sensed, habitat map. This procedure revealed that : (1) spatial factors at 10 to 100-m scale explained up to 71% of variability in juvenile species richness, (2) a small improvement (75%) was gained when a combination of environmental variables at different spatial and temporal scales was used and (3) the coupling of remotely sensed data, geographical information system tools and point-based ecological data showed that the highest species richness and abundance were predicted along a narrow margin overlapping the coral reef flat and adjacent seagrass beds. Spatially explicit models of species distribution may be relevant for the management of reef communities when strong relationships exist between faunistic and environmental variables and when models are built at appropriate scales.     

Temporal variability in fish assemblages from disturbed and undisturbed streams

Fish assemblages were sampled by electrofishingover a two- to ten-year period in undisturbedand anthropogenically disturbed South Carolinacoastal plain streams. Jaccard similarity,Bray–Curtis similarity, and Spearman rankcorrelations among samples collected from thesame sites over time were significantly greaterat undisturbed sites than at disturbed sites,suggesting greater fish assemblage persistenceand stability at the undisturbed sites. TheIndex of Biotic Integrity (IBI) also exhibitedsignificantly less variation over time atundisturbed sites than at disturbed sites.Physical habitat structure changed more overtime at disturbed sites than at undisturbedsites, and this variability was directlyrelated to temporal variability in fishassemblage structure. Comparisons betweenmultiple and single pass electrofishing samplessuggested that only a small proportion of thetemporal variability observed at the studysites was caused by inefficient sampling.Assessment of temporal variation in fishassemblage structure can serve as an indicatorof environmental disturbance and facilitate thedistinction of substantive ecological changefrom normal background variation.     

海草生态学研究进展

海草床生态系统是生物圈中最具生产力的水生生态系统之一,具有重要的生态系统服务功能。作者根据海草生态学及相关领域的最新研究进展,对世界范围内海草床的空间分布、海草床的生态系统服务功能以及外界因素对海草床的影响等研究进展进行了综述。海草床生态系统服务功能主要包括净化水质、护堤减灾、提供栖息地和生态系统营养循环等。对海草床影响较大的外界环境因素包括盐度、温度、营养盐、光照、其他动物摄食、人类活动和气候变化等。海草普查、海草生态功能研究,影响海草床的主要环境因素,海草修复研究等将是我国海草研究的主要方向。     

Islands of water in a sea of dry land: hydrological regime predicts genetic diversity and dispersal in a widespread fish from Australia's arid zone, the golden perch (Macquaria ambigua)

Rivers provide an excellent system to study interactions between patterns of biodiversity structure and ecological processes. In these environments, gene flow is restricted by the spatial hierarchy and temporal variation of connectivity within the drainage network. In the Australian arid zone, this variability is high and rivers often exist as isolated waterholes connected during unpredictable floods. These conditions cause boom/bust cycles in the population dynamics of taxa, but their influence on spatial genetic diversity is largely unknown. We used a landscape genetics approach to assess the effect of hydrological variability on gene flow, spatial population structure and genetic diversity in an Australian freshwater fish, Macquaria ambigua. Our analysis is based on microsatellite data of 590 samples from 26 locations across the species range. Despite temporal isolation of populations, the species showed surprisingly high rates of dispersal, with population genetic structure only evident among major drainage basins. Within drainages, hydrological variability was a strong predictor of genetic diversity, being positively correlated with spring-time flow volume. We propose that increases in flow volume during spring stimulate recruitment booms and dispersal, boosting population size and genetic diversity. Although it is uncertain how the hydrological regime in arid Australia may change under future climate scenarios, management strategies for arid-zone fishes should mitigate barriers to dispersal and alterations to the natural flow regime to maintain connectivity and the species' evolutionary potential. This study contributes to our understanding of the influence of spatial and temporal heterogeneity on population and landscape processes.     

Theoretical habitat templets, species traits, and species richness: birds in the Upper Rhône River and its floodplain

• 1 To test predictions of the river habitat templet and the patch dynamics concept, twenty species traits and the species richness of eighty-one bird species were examined in the context of the spatial – temporal variability of ninety-one sites at Jons, a section of the Upper Rhône River, France.
• 2 The basic information was obtained either from the literature (for species traits) or by observation, then structured by a fuzzy coding technique, and examined using multivariate analyses.
• 3 The relationships between species traits separated three groups of birds: (i) large species that are long lived, have long breeding cycles, and use open sites to feed, breed, and sing (e.g. Podicipidae, Laridae); (ii) medium-sized species with intermediate longevities and breeding cycles that use less open sites (e.g. Columbidae, Corvidae); and (iii) small species that are short lived, have short breeding cycles, and use closed sites (e.g. Sylviidae).
• 4 The distribution of birds in the floodplain habitats of the river was closely related to the spatial–temporal variability of sites.
• 5 No trends in species traits were observed along a gradient of spatial–temporal variability of the sites.
• 6 Species richness of birds was relatively constant over the gradient of spatial–temporal variability of the ninety-one sites, but decreased at low spatial and high temporal variability because of human activities and vegetation changes that occurred at these sites.
• 7 These observations on species traits and richness were related to the high mobility of birds (which is a scale phenomenon) and the high intercorrelation between parameters used to determine the spatial and temporal variability of the sites (which makes separation of the spatial from the temporal variability impossible).

     

Environmental uncertainty and the global biogeography of cooperative breeding in birds

Understanding why organisms as different as amoebas, ants, and birds cooperate remains an important question in evolutionary biology. Although ecology can influence cooperation and conflict within animal societies and has been implicated in species differences in sociality, the environmental predictors of sociality across broad geographic and taxonomic scales remain poorly understood. In particular, the importance of temporal variation in selection pressure has been underestimated in most evolutionary studies. Environmental uncertainty resulting from climatic variation is likely to be an important driver of temporal variation in selection pressure and therefore is expected to impact the evolution of behavioral, morphological, and physiological traits, including cooperation. Using a data set of over 95% of the world's birds, we examine the global geography and environmental, biotic, and historical biogeographic predictors of avian social behavior. We find dramatic spatial variation in social behavior for which environmental and biotic factors--namely, among-year environmental variability in precipitation--are important predictors. Although the clear global biogeographic structure in avian social behavior carries a strong signal of evolutionary history, environmental uncertainty plays an additional key role in explaining the incidence and distribution of avian cooperative breeding behavior.     

Quantifying the direct and indirect effects of flow‐related disturbance on stream fish assemblages

相似文献   

Designing bryophyte surveys for an optimal coverage of diversity gradients

Knowledge on the distribution and abundance of species is plagued by significant taxonomic and geographic biases that influence the analyses on biodiversity patterns. Due to this, standard, easy-to-use methods are needed to design efficient field campaigns that minimize data deficiencies. We evaluate the applicability, usefulness and effectiveness of a survey design protocol based on the Environmental Diversity (ED) criterion under different scenarios, with examples of varying extent of environmental niche, range of spatial distribution and level of previous knowledge. We planned surveys for epiphytic bryophytes growing in three types of forests at NW Iberian Peninsula (dominated by Quercus ilex, Q. faginea and Q. pyrenaica). Knowledge on the distribution and abundance of epiphytic bryophytes in this region presents large gaps and strong geographic biases. Besides, the three forest types differ in their environmental requirements, spatial distribution and level of previous knowledge, providing three working scenarios to test the response of the protocol under different situations. The protocol was implemented as a set of sequential selection rules, starting by an ED-based criterion aiming at maximizing the coverage of climatic and geographic variability; further criteria include an iterative set of qualitative properties: maximizing forest area, conservation status and accessibility. The protocol performed efficiently at different ranges of spatial distribution levels of environmental variability, and degree of previous knowledge and generated an even distribution of sampling points that efficiently covered the diversity of epiphytic bryophytes. The results show that ED protocols are a proficient and time-saving approach to select sampling sites by objective criteria also for groups with high dispersal ability and fragmented landscapes.     

Monitoring temporal changes in the biology of acid waters

1. Assemblages of epilithic diatoms, macrophytes, benthic macroinvertebrates and fish were monitored over a 5-year period (1988–92) in ten lakes and nine streams in the U.K., as part of the U.K. Acid Waters Monitoring Network. All organisms were categorized according to their functional or morphological characteristics and integrated to describe the food web at each site. In general, the flora and fauna of all sites were typical of oligotrophic, softwater systems subject to various degrees of acidification. 2. Salmonids were the only fish caught at any site and brown trout were the dominant species. With only 5 years of data it was not possible to test for directional changes in fish populations at each site. Among sites, fish density was positively associated with pH, and this did not vary between lake outflows and streams or between fish of different age class (0 +, 1 +). Condition factor, reflecting fish health, was not associated with pH among sites, but was negatively associated with fish density and, on average, was higher for fish in streams than those in lake outflows. 3. Variability in the diatom, macrophyte and invertebrate data sets were quantified in three ways using multivariate techniques: species turnover or replacement (temporal variation due to directional change), persistence (the reciprocal of between-year variability) and within-year variability (heterogeneity between sample replicates). For all groups, turnover was relatively low and persistence was high. The least persistent macrophyte assemblages occurred in stream sites and this may reflect high inter-annual variation in the cover of filamentous algae which are prone to scouring. Within-year variability was higher than turnover or between-year variability for the diatoms and invertebrates, and highest values were recorded for lake invertebrates. 4. Redundancy analysis, RDA, was used to test the diatom, macrophyte, invertebrate and food web data for evidence of directional changes over time and its significance was assessed using Monte Carlo permutation tests. These tests appeared robust to temporal and spatial variability in the data set. Significant trends could be identified in some data sets despite considerable between-replicate and non-linear between-year variability. 5. Significant linear trends in at least one biological group were found at eight lake and seven stream sites. Only one lake and one stream had significant trends in all four groups. These trends represent changes in the flora and/or fauna, but they can be interpreted in several different ways. Only six sites showed trends that were consistent with our knowledge of species’ responses to water chemistry: three indicated increased acidity and three indicated decreased acidity. At only one site were the biological results consistent with observed chemical changes and there was disagreement at the other five. Of the other nine sites that showed biological changes, two appeared to reflect known physical habitat disturbances; the other seven remain unexplained.     

Responses of algal communities to gradients in herbivore biomass and water quality in Marovo Lagoon, Solomon Islands

Settlement tiles were used to characterise and quantify coral reef associated algal communities along water quality and herbivory gradients from terrestrial influenced near shore sites to oceanic passage sites in Marovo Lagoon, the Solomon Islands. After 6 months, settlement tile communities from inshore reefs were dominated by high biomass algal turfs (filamentous algae and cyanobacteria) whereas tiles located on offshore reefs were characterised by a mixed low biomass community of calcareous crustose algae, fleshy crustose algae and bare tile. The exclusion of macrograzers, via caging of tiles, on the outer reef sites resulted in the development of an algal turf community similar to that observed on inshore reefs. Caging on the inshore reef tiles had a limited impact on community composition or biomass. Water quality and herbivorous fish biomass were quantified at each site to elucidate factors that might influence algal community structure across the lagoon. Herbivore biomass was the dominant driver of algal community structure. Algal biomass on the other hand was controlled by both herbivory and water quality (particularly dissolved nutrients). This study demonstrates that algal communities on settlement tiles are an indicator capable of integrating the impacts of water quality and herbivory over a small spatial scale (kilometres) and short temporal scale (months), where other environmental drivers (current, light, regional variability) are constant.     

Diel variability in counts of reef fishes and its implications for monitoring

Studies of reef fish assemblages in space rarely consider the effects of temporal variability on spatial comparisons, and when they do, usually examine timescales of months to years. The nature of fish monitoring surveys is such that particular locations may be surveyed at one time of day, and surveys designed to establish the degree of spatial variability in assemblages may be confounded if the order of sampling within treatments is not randomised with respect to time of day. In this study, we tested the degree of temporal variability in temperate reef fish counts at the same sites in New Zealand and Italy, within and between days. Repeated counts separated by months returned quite different assemblages, whereas counts separated by days did not. Although overall assemblage structure did not generally differ significantly with time of day, at some locations there was evidence of changes in the relative density of certain species in the afternoon relative to the morning. Care must be taken not to introduce systematic bias to spatial comparisons due to behavioural variability in fishes at differing times of day.