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1.
Summary We have studied the reactions between adenosine 5-phosphorimidazolide and 9-(2-amino-2-deoxyxylofuranosyl) adenine (I) or 3-methylamino-3-deoxyadenosine (II), both with and without a poly (U) template. We find that both amino compounds react much more rapidly than does adenosine, in the absence of a template. The rate of reaction is greatly enhanced by a poly (U) template in the case of I, but the enhancement is slight in the case of II.Abbreviations A
adenosine
- xylo ANH2
9-(2-amino-2-deoxy--D-xylofuranosyl) adenine
- ANHMe
3-methylamino-3-deoxyadenosine
- ImpA
adenosine 5-phosphorimidazolide
- A3 pA
adenylyl-[35]-adenosine
- A2 pA
adenylyl-[25]-adenosine
- UNPA
adenylyl-[52]-2-amino-2-deoxyuridine
- xylo ANPA
9-[adenylyl-(52)-2-amino-2-deoxy--D-xylofuranosyl]adenine
- A(NMe)pA
adenylyl-[53]-3-methylamino-3-deoxyadenosine
- pA
adenosine 5phosphate
- AppA
P1, P2-diadenosine 5pyrophosphate
- (pA)n
n = 2, 3 [2-5]-linked oligomers of pA
- A2 pA2 pA
[2-5]-linked trinucleoside diphosphate of A
- poly (U)
polyuridylic acid 相似文献
2.
Summary Soluble lead salts and a number of lead-containing minerals catalyze the formation of oligonucleotides from nucleoside 5-phosphorimidazolides. The effectiveness of lead compounds correlates strongly with their solubility. Under optimal conditions we were able to obtain 18% of pentamer and higher oligomers from ImpA. Reactions involving ImpU gave smaller yields.Abbreviations A
adenosine
-
U
uridine
-
Im
imidazole
-
MeIm
1-methyl-imidazole
-
EDTA
ethylenediaminetetraacetic acid
-
pA
adenosine 5-phosphate
-
pU
uridine 5-phosphate
-
Ap
adenosine cyclic 2:3-phosphate
-
ATP
adenosine 5-triphosphate
-
AppA
P1,P2-diadenosine 5-diphosphate
-
pNp (N = A,U)
nucleotide 2(3), 5-diphosphate
-
ImpA
adenosine 5-phosphoreimidazolide
-
ImpU
uridine 5-phosphorimidazolide
-
A
2pA
adenylyl-[25]-adenosine
-
A
3pA
adenylyl-[35]-adenosine
-
pA
2pA
5-phospho-adenylyl-[25]-adenosine
-
pA
3pA
5-phospho-adenylyl-[35]-adenosine
-
pUpU
5-phospho-uridylyl-uridine
-
pApU
5-phospho-adenylyl-uridine
-
pUpA
5-phospho-uridylyladenine
-
(pA)n (n, 2,3,4,)
oligoadenylates with 5 terminal phosphate
-
ImpApA
5-phosphorimidazolide of adenylyl adenosine
-
(pA)
5+
pentamer and higher oligoadenylates with 5 terminal phosphate
-
(Ap)nA (n = 2,3,4)
oligoadenylates without terminal phosphates
In the following we do not specify the nature of the internucleotide linkageIn the following we do not specify the nature of the internucleotide linkage 相似文献
3.
R. Lohrmann 《Journal of molecular evolution》1977,10(2):137-154
Summary Adenosine 5-phosphoramidates form when solutions containing adenosine 5-polyphosphates pnA (n 3) or P1, P2-diadenosine 5-diphosphate and amines are allowed to dry out. Mg ions catalyze these reactions. We have studied systems containing ammonia, imidazole, glycine, ethylenediamine and histamine. The yields of adenosine 5-phosphoramidates range from 10–50 % based on the nucleotide. The prebiotic significance of the reactions is discussed.Abbreviations Im
imidazole
- hist
histamine
- gly
glycine
- en
ethylenediamine
- CDI
1-ethyl-3-(3-dimethylaminopropyl)-carbodiimide hydrochloride
- EDTA
ethylenediaminetetraacetic acid
- A
adenosine
- Pn (n = 1, 2 )
linear polyphosphate containing n phosphate residues
- pnA
adenosine 5-polyphosphate containing n phosphate residues
- ADP
adenosine 5-diphosphate
- ATP
adenosine 5-triphosphate
- AppA
P1, P2-diadenosine 5-diphosphate
- gly-pA
adenylyl-(5N)-glycine
- ImpA
adenosine 5-phosphorimidazolide
- NH2-pA
adenosine 5-phosphoramidate
- en-pA
adenylyl-(5N)-ethylenediamine
- hist (NH) - pA
adenosine 5-phospho-[2-(4-imidazolyl)-ethylamide]
- hist(Im)-pA
adenosine 5-phospho-[4-(2-aminoethyl)-imidazolide]
- enP1,2
phosphoramidates of ethylenediamine derived from H3PO4 and H4P2O7 相似文献
4.
Summary 2-Amino-2-deoxyuridine reacts efficiently with nucleoside 5-phosphorimidazolides in aqueous solution. The dinucleoside monophosphate analogues were obtained in yields exceeding 80% under conditions in which little reaction occurs with the natural nucleosides.In a similar way, the 5-phosphorimidazolide of 2-amino-2-deoxyuridine undergoes self-condensation in aqueous solution to give a complex mixture of oligomers.The phosphoramidate bond in the dinucleoside monophosphate analogues is stable for several days at room temperature and pH 7. The mechanisms of their hydrolysis under acidic and alkaline conditions are described.Abbreviations A
adenosine
- C
cytidine
- G
guanosine
- U
uridine
- T
thymidine
- UN
3
2-azido-2-deoxyuridine
- UNH
2
2-amino-2-deoxyuridine
- ImpA
adenosine 5-phosphorimidazolide
- ImpU
uridine 5-phosphorimidazolide
- ImpUN
3
2-azido-2-deoxyuridine 5-phosphorimidazolide
- ImpUNH
2
2-amino-2-deoxyuridine 5-phosphorimidazolide
- pA
adenosine 5-phosphate
- pU
uridine 5-phosphate
- pUN
3
2-azido-2-deoxyuridine 5-phosphate
- pUNH
2
2-amino-2-deoxyuridine 5-phosphate
- UpA
uridylyl-[35]-adenosine
- UpU
uridylyl-[35]-uridine
- UNpA
adenylyl-[52]-2-amino-2-deoxy-uridine
- UNpU
uridylyl-[52]-2-amino-2-deoxyuridine (pUN)n n=2,3,4 [25]-linked oligomers of pUNH
2 poly(A) polyadenylic acid
- Im
imidazole
- MeIm
l-methylimidazole 相似文献
5.
Summary We have studied a number of condensation reactions involving ImpU, ImpT, ImpC, ImpA, ImpG, ImpUpG and ImpCpA as activated nucleotide donors and a variety of homo- and hetero-polynucleotides as templates. We did not obtain any evidence of a template effect with ImpU and ImpT, but observed some condensation of ImpC with GpG on appropriate templates. ImpA and ImpG take part in a number of more or less efficient template-directed reactions, as do ImpUpG and ImpCpA.Our results suggest that, on the primitive Earth, pyrimidine nucleotides could most easily have been incorporated into polymers as constituents of short oligomers, which contained one or more purine nucleotide. The linkage of the product depends strongly on the nature of the substrates; the percentage of the natural 3-5-linkage was, in some cases, less than 10% and, in others, as high as 70%. Wobble-pairing was often very effective in promoting condensations, suggesting that transition mutations would have been very frequent in prebiotic polynucleotide replication.Abbreviations and Conventions U
uridine
- T
thymidine
- C
cytidine
- A
adenosine
- G
guanosine
- pN
nucleoside-5-phosphate
- Np
a mixture of 2- and 3-phosphates of a nucleoside
- pNp
a mixture of the 2-5-diphosphate and 3-5-diphosphate of a nucleoside
- N1
2 pN2
a 2-5-linked dinucleoside monophosphate
- N1
3 pN2
a 3-5-linked dinucleoside monophosphate
- N5 ppN
a pyrophosphate derived from a nucleoside-5-phosphate. ImpN and ImpN1pN2 are 5-phosphorimidazolides of nucleosides and 3-5-linked dinucleoside monophosphates, respectively
- poly(N)
a homopolynucleotide
- poly (U1 C2 A4 G3)
a random copolymer derived from a substrate mixture containing U, C, A, G in ratio 1:2:4:3
- ODU
optical density units measured at 260 nm 相似文献
6.
Summary Organic pyrophosphates such as UppA and NAD are formed when a solution containing a nucleotide, a nucleoside 5-polyphosphate, Mg2+ and imidazole are allowed to dry out. We suggest that this synthesis may have occured concurrently with oligonucleotide formation.Abbreviations Im
Imidazole
- CDI
1-ethyl-3-(3-dimethylaminopropyl)-carbodiimide hydrochloride
- EDTA
ethylenediaminetetraacetic acid
- A
adenosine
- U
uridine
- pnA
adenosine 5-poly-phosphate containing n phosphate residues
- pU
uridine 5-phosphate
- AppA
P1,P2-diadenosine 5-pyrophosphate
- UppA
P1-(uridine 5)-P2-(adenosine 5)-pyrophosphate
- ImpA
adenosine 5-phosphorimidazolide
- NMN
nicotinamide mononucleotide
- NAD
nicotinamide-adenine dinucleotide 相似文献
7.
R. Lohrmann 《Journal of molecular evolution》1975,6(4):237-252
Summary When solutions of nucleoside 5-phosphates and trimetaphosphate are dried out at room temperature, nucleoside 5-polyphosphates are formed. The Mg++ ion shows a superior catalytic function in this reaction when compared with other divalent metal ions. Starting with nucleoside 5-phosphates, Mg++ and trimetaphosphate, the predominant products in the nucleoside 5-polyphosphate series pnN are p4N, p7N and P10N. Nucleoside 5-diphosphates yield p5N and p8N, nucleoside 5-triphosphates give p6N and p9N. The prebiological relevance of these reactions is discussed.Abbreviations Pn (n = 1,2,3,)
linear polyphosphate containing n phosphate residues
- P3!
trimetaphosphate
- A
adenosine
- U
uridine
- dA
2-dexyadenosine
- T
thymidine
- PnN
nucleoside 5-polyphosphate containing n phosphate residues, e.g. with N = A and n = 4
- p4A
adenosine 5-tetraphosphate 相似文献
8.
Takenori Miyamoto Diego Restrepo Edward J. Cragoe Jr. John H. Teeter 《The Journal of membrane biology》1992,127(3):173-183
Summary Olfactory receptor neurons enzymatically dissociated from channel catfish olfactory epithelium were depolarized transiently following dialysis of IP3 or cAMP (added to the patch pipette) into the cytoplasm. Voltage and current responses to IP3 were blocked by ruthenium red, a blocker of an IP3-gated Ca2+-release channel in sarcoplasmic reticulum. In contrast, the responses to cAMP were not blocked by extracellularly applied ruthenium red, nor by l-cis-diltiazem or amiloride and two of its derivatives. The current elicited by cytoplasmic IP3 in neurons under voltage clamp displayed a voltage dependence different from that of the cAMP response which showed marked outward rectification. A sustained depolarization was caused by increased cytoplasmic IP3 or cAMP when the buffering capacity for Ca2+ of the pipette solution was increased, when extracellular Ca2+ was removed or after addition of 20–200 nm charibdotoxin to the bathing solution, indicating that the repolarization was caused by an increase in [Ca
i
] that opened Ca2+-activated K+ channels. The results suggest that different conductances modulated by either IP3 or cAMP are involved in mediating olfactory transduction in catfish olfactory receptor neurons and that Ca2+-activated K+ channels contribute to the termination of the IP3 and cAMP responses.Abbreviations ATP
adenosine 5-triphosphate
- BAPTA
(bis-(o-aminophenoxy)-ethane-N-N-N-N)-tetraacetic acid
- cAMP
adenosine cyclic 3,5-monophosphate
- cGMP
guanosine cyclic 3,5-monophosphate
- CTX
charybdotoxin
- DCB
3,4-dichlorobenzamil
- EDTA
ethylenediaminetetraacetic acid
- EGTA
ethylenglycol-bis-(b-aminoethyl)-N-N-N-N-tetraacetic acid
- HEPES
N-2-hydroxyethylpiperazine-N-2-ethanesulfonic acid
- IP3
inositol-1,4,5-triphosphate
- NMDG
N-methyl-d-glucamine
We would like to thank the Tanabe Seiyaku Co., Ltd., for their gift of l-cis-diltiazem. This work was supported by National Institutes of Health grants DC00566 and BRSG S07RR05825. 相似文献
9.
R. Lohrmann 《Journal of molecular evolution》1976,8(3):197-210
Summary Aqueous solutions of linear inorganic polyphosphates incubated in presence of Mg ions depolymerize to give trimetaphosphate. The presence of a nucleoside 5-phosphate has little influence upon the reaction. Drying the products obtained by incubating a linear polyphosphate with Mg ions in the presence of a nucleoside 5-phosphate yields nucleoside 5-polyphos-phates. The prebiological relevance of the reactions is discussed.Abbreviations Pn(n=1,2,3,)
linear polyphosphate containing n phosphate residues
- P3!
trimetaphosphate
- A
adenosine
- pnN
nucleoside 5-polyphosphate containing n phosphate residues, e.g. with N = A, n = 4
- p4N
adenosine 5-tetraphosphate
-
P
*
lpmA
pnA, (n = 1 + m); adenosine 5-polyphosphate containing n phosphate units with33p-label on terminal 1 phosphate groups 相似文献
10.
Ahlert Schmidt 《Archives of microbiology》1977,112(3):263-270
Crude extracts of Rhodospirillum rubrum catalyzed the formation of acid-volatile radioactivity from (35S) sulfate, (35S) adenosine-5-phosphosulfate, and (35S) 3-phosphoadenosine-5-phosphosulfate. An enzyme fraction similar to APS-sulfotransferases from plant sources was purified 228-fold from Rhodospirillum rubrum. It is suggested here that this enzyme is specific for adenosine-5-phosphosulfate, because the purified enzyme fraction metabolized adenosine-5-phosphosulfate, however, only at a rate of 1/10 of that with adenosine-5-phosphosulfate. Further, the reaction with 3-phosphoadenosine-5-phosphosulfate was inhibited with 3-phosphoadenosine-5-phosphate whereas this nucleotide had no effect on the reaction with adenosine-5-phosphosulfate. For this activity with adenosine-5-phosphosulfate the name APS-sulfotransferase is suggested. This APS-sulfotransferase needs thiols for activity; good rates were obtained with either dithioerythritol or reduced glutathione; other thiols like cysteine, 2-3-dimercaptopropanol or mercaptoethanol are less effective. The electron donor methylviologen did not catalyze this reaction. The pH-optimum was about 9.0; the apparent K
m for adenosine-5-phosphosulfate was determined to be 0.05 mM with this so far purified enzyme fraction. Enzyme activity was increased with K2SO4 and Na2SO4 and was inhibited by 5-AMP. These properties are similar to assimilatory APS-sulfotransferases from spinach and Chlorella.Abbreviations APS
adenosine-5-phosphosulfate
- PAPS
3-phosphoadenosine-5-phosphosulfate
- 5-AMP
adenosine-5-monophosphate
- 3-AMP
adenosine-3-monophosphate
- 3-5-ADP
3-phosphoadenosine-5-phosphate (PAP)
- DTE
dithiorythritol
- GSH
reduced glutathione
- BAL
2-3-dimercaptopropanol 相似文献
11.
Crude extracts or supernatants of broken cells of Clostridium formicoaceticum reduce unbranched, branched, saturated and unsaturated carboxylates at the expense of carbon monoxide to the corresponding alcohols. The presence of viologens with redox potentials varying from E
0=-295 to-650 mV decreased the rate of propionate reduction. The more the propionate reduction was diminished the more formate was formed from carbon monoxide. The lowest propionate reduction and highest formate formation was observed with methylviologen. The carbon-carbon double bond of E-2-methyl-butenoate was only hydrogenated when a viologen was present. Formate as electron donor led only in the presence of viologens to the formation of propanol from propionate. The reduction of propionate at the expense of a reduced viologen can be followed in cuvettes. With respect to propionate Michaelis Menten behavior was observed. Experiments are described which lead to the assumption that the carboxylates are reduced in a non-activated form. That would be new type of biological reduction.Non-standard abbreviations glc
Gas liquid chromatography
- HPLC
high performance liquid chromatography
- RP
reverse phase; Mediators (the figures in parenthesis of the mediators are redox potentials E
0 in mV)
- CAV2+
carbamoylmethylviologen, 1,1-carbamoyl-4,4-dipyridinium dication (E
0=-296 mV)
- BV2+
benzylviologen, 1,1-dibenzyl-4,4-dipyridinium dication (E
0=-360 mV)
- MV
methylviologen, 1,1-dimethyl-4,4-dipyridinium-dication (E
0=-444 mV)
- DMDQ2+
dimethyldiquat, 4,4-dimethyl-2,2-dipyridino-1,1-ethylendication (E
0=-514 mV)
- TMV2+
tetramethylviologen, 1,1,4,4-tetramethyl-4,4-dipyridinium dication (E
0=-550 mV)
- PDQ2+
propyldiquat, 2,2-dipyridino-1,1-propenyl dication (E
0=-550 mV)
- DMPDQ2+
dimethylpropyldiquat, 4,4-dimethyl-2,2-dipyridino-1,1-propenyl dication (E
0=-656 mV)
- PN
productivity number=mmol product (obtained by the uptake of one pair of electrons) x (biocatalyst (dry weight) kg)-1×h-1 相似文献
12.
K. Joseph Prabahar James P. Ferris 《Origins of life and evolution of the biosphere》1997,27(5-6):513-523
The oligomerization of adenosine 5-phosphoro-4-(dimethylamino)pyridinium (4-(CH3)2-NpypA) and diadenosine 5,5-pyrophosphate (A5ppA) (9:1) on Na+-montmorillonite was studied. The oligomers were isolated and analyzed by selective enzymatic hydrolyses and the oligomeric composition and the percent of 3,5-phosphodiester linkages present in each fraction was determined. The longest oligomers formed (11-mers) are slightly shorter than those produced in the absence of A5ppA (12-mers). Smaller amounts of A5ppA are incorporated into the oligomers than in the ImpA/A5ppA reaction. The regioselectivity of 3,5-phosphodiester bond formation is comparable to that of the oligomerization of 4-(CH3)2NpypA alone. An explanation of these data is proposed and the possible effect of dinucleoside pyrophosphate on prebiotic RNA formation is discussed. 相似文献
13.
Hiroaki Sawai 《Journal of molecular evolution》1981,17(1):48-51
Summary Oligouridylates with more than eight chain units can serve as a template for the template-directed condensation of ImpA catalyzed by Pb2+ ion. The templates and the Pb2+ ion catalyst facilitate the formation of longer oligoadenylates with five or more units. The ratio of 3–5 linked oligomers to the 2–5 isomers increases with increasing chain length of the oligouridylate template. Short oligouridylates up to a hexamer tend to decrease the yield of oligoadenylates, and do not affect the selectivity of internucleotide linkage.Abbreviations EDTA
ethylenediaminetetracetic acid
- Tris
tris(hydroxymethyl)aminomethane
- A
adenosine
- ImpA
adenosine 5-phosphorimidazolide
- pA
adenosine 5-phosphate
- Ap
adenosine 2(3)-phosphate
- poly A
polyadenylic acid
- AppA
P1,P2-diadenosine 5-diphosphate
- pAp
adenosine 2(3),5-diphosphate
- ApA
adenylyl adenosine
- (pA)n (n = 2,3,)
oligomers of pA
- ImpApA
5-phosphorimidazolide of ApA
- U
uridine
- pU
uridine 5-phosphate
- Up
uridine 2(3)-phosphate
- poly U
polyuridylic acid
- pUp
uridine 2(3),5-diphosphate
- (pU)n (n = 2,3,)
oligomers of pU
- (pU)n – (pA)m
cooligomers composed of (pU)n and (pA)m units
- AppUpUpUpUp
pyrophosphate derived from pA and (pU)4
- AppUp
P1-(adenosine 5)-P2-(uridine 2(3)-phosphate 5) -pyrophosphate
- BAP
bacterial alkaline phosphatase
- VPD
venom phosphodiesterase
- N.P1
nuclease P1
- RNase A
pancreatic ribonuclease
- A*
radioactive adenosine 相似文献
14.
Summary The self-condensation of 2(3)-O-glycyl esters of adenosine, adenosine-5-(O-methylphosphate) and P1, P2-diadenosine-5-pyrophosphate in 6.2 mM solutions at pH 8.0 and -5°C in the presence of 12.5 mM poly(U) yields approximately 3 times as much diketopiperazine as reactions without poly(U). As the concentration of 2(3)-O-(glycyl)-P1, P2-diadenosine-5-pyrophosphate is decreased from 6.2 mM to 1.5 mM the yield of diketopiperazine in the presence of poly(U) decreases slightly from 6.6% to 5.2%, whereas, in the absence of poly(U) the yield of diketopiperazine decreases substantially from 2.4% to 0.75%. The enhanced yield of diketopiperazine that is attributed to the template action of poly(U) is temperature dependent and is observed only at temperatures below 10°C (5°C to -5°C) for 6.2 mM 2(3)-O-(glycyl)-adenosine-5-(O-methylphosphate) and below 23°C (15°C to -5°C) for 6.2 mM 2(3)-O-(glycyl)-P1, P2-diadenosine-5-pyrophosphate. The absence of a template effect at high temperatures is attributed to the melting of the organized helices. The hydrolysis half-lives at pH 8.0 and -5°C of 2(3)-O-(glycyl)-adenosine, 2(3)-O-(glycyl)-adenosine-5-(O-methylphosphate), 2(3)-O-(glycyl)-P1, P2-diadenosine-5-pyrophosphate, and 5-O-(glycyl)-adenosine in the presence of poly(U) are substantially larger than their half-lives in the absence of poly(U). The condensation of 2(3)-O-(glycyl)-adenosine yields 5% of 5-O-(glycyl)-adenosine in the presence of poly(U) compared to 0.7% in the absence of poly(U).Abbreviations DKP
diketopiperazine
- (gly)2
glycylglycine
- (gly)3
glycylglycylglycine
- AppA-gly
2(3)-O-(glycyl)-P1, P2-diadenosine-5-pyrophosphate
- MepA-gly
2(3)-O-(glycyl)-adenosine-5-(O-methylphosphate)
- Ado-2(3)-gly
2(3)-O-(glycyl)-adenosine
- Ado-5-gly
5-O-(glycyl)-adenosine
- Boc-gly
N-tert-butyloxycarbonylglycine
- AppA
P1, P2-diadenosine-5-pyrophosphate
- MepA
adenosine-5-(O-methylphosphate)
- AppA-Boc-gly
2(3)-O-(Boc-glycyl)-P1, P2-diadenosine-5-pyrophosphate
- Ado-5-Boc-gly
5-O-(Boc-glycyl)-adenosine
- Ado-2(3)-Boc-gly
2(3)-O-(Boc-glycyl)-adenosine 相似文献
15.
Summary Imidazolides of dinucleotides such as ImpApA can be formed from the corresponding dinucleotides in a two-stage process, which gives up to 15% yields under potentially prebiotic conditions. First a solution of the dinucleotide and sodium trimetaphosphate is dried out at constant temperature and humidity. This produces polyphosphates such as pnApA in excellent yield (80%). The products are dissolved in water, imidazole is added, and the solution is dried out again. This yields the 5-phosphorimidazolides.Abbreviations P3!
trimetaphosphate
- A
adenosine
- U
uridine
- EDTA
ethylenediaminetetraacetic acid
- Ap
adenosine 2(3)-phosphate
- Ap!
adenosine cyclic 2:3-phosphate
- pA
adenosine 5-phosphate
- pA2p
adenosine 2, 5-diphosphate
- pA3p
adenosine 3, 5-diphosphate
- pAp!
5-phospho-adenosine cyclic 2:3-phosphate
- ATP
adenosine 5-triphosphate
- ImpA
adenosine 5-phosphorimidazolide
- A2pA
adenylyl-[25]-adenosine
- A3pA
adenylyl-[35]-adenosine
- A2pU
adenylyl-[25]-uridine
- A3pU
adenylyl-[35]-uridine
- pA2pA
5-phosphoadenylyl-[25]-adenosine
- pA3pA
5-phospho-adenylyl-[35]-adenosine
- pA2pU
5-phospho-adenylyl-[25]-uridine
- pA3pU
5-phospho-adenylyl-[35]-uridine
- pApN (N= A, U)
5-phosphate of a dinucleoside phosphate
- pnApN (N = A, U; n = 2, 3, 4.)
5-polyphosphate of a dinucleoside phosphate
- ImpA2pA
imidazolide of pA2pA
- ImpA3pA
imidazolide of pA3pA
- ImpA2pU
imidazolide of pA2pU
- ImpA3pU
imidazolide of pA3pU
- ImpApN
imidazolide of pApN 相似文献
16.
S. Biagionia G. Scarsella L. Settimi M. E. Traina 《Molecular and cellular biochemistry》1982,43(3):183-190
Summary Inhibition of growth of PY815 mouse mastocytoma cells in vitro by N6, O2-dibutyryladenosine 3,5 cyclic monophosphate (DB cyclic AMP) was accompanied by increases in intracellular cyclic AMP and histamine and minor changes in cytosolic cyclic AMP-dependent histone kinase activity. However, DEAE-cellulose chromatography revealed substantial changes in the relative proportions of the principal cyclic AMP-dependent protein kinases and in free cyclic AMP-binding protein after DB cyclic AMP treatment. The activity of cytosolic cyclic AMP-dependent protein kinase type I (PKI) decreased relative to cyclic AMP-dependent protein kinase type II (PKII) and there was an increase in a cytosol cyclic AMP-binding protein with little associated protein kinase activity. The relative changes in activity of PKI, PKII and cyclic AMP binding protein after DB cyclic AMP treatment may reflect events important in the regulation of growth and differentiation of mast cells.Abbreviations DB cyclic AMP
N6,O2-dibutyryladenosine-3, 5-cyclic monophosphate
- cyclic AMP
adenosine 3,5-cyclic monophosphate
- PKI
type I cyclic AMP-dependent protein kinase
- PKII
type II cyclic AMP-dependent protein kinase 相似文献
17.
The role of de novo synthesis in the regulation of adenosine 5-phosphosulfate sulfotransferase activity by H2S inLemna minor L. was investigate using density labeling with15N applied as15NO
3
–
in the culture medium. While adenosine 5-phosphosulfate sulfotransferase activity was rapidly reduced by H2S and rapidly recovered upon removal of H2S, O-acetyl-L-serine sulfhydrylase (EC 4.2.99.8) did not show changes in extractable activity in response to H2S and could therefore be used as an internal marker enzyme for density labeling. The incorporation of15N into adenosine 5-phosphosulfate sulfotransferase was strongly reduced upon transfer of plants into a H2S-containing atmosphere. Half-maximal labeling was reached only after 70–80 h compared to 40–50 h in the control. After removal of H2S, adenosine 5-phosphosulfate sulfotransferase activity increased to the initial level within 20 h, and the enzyme reached halfmaximal labeling after only 15 h. The time course of the density increase of O-acetyl-L-serine sulfhydrylase was not affected very significantly by H2S. These results provide evidence that de novo synthesis of enzyme protein is involved in the regulation of adenosine 5-phosphosulfate sulfotransferase activity by H2S.Abbreviations APS
adenosine 5-phosphosulfate
- APSSTase
adenosine 5-phosphosulfate sulfotransferase
- BSA
Bovine serum albumine
- DTE
dithioerythritol
- OAS
O-acetyl-L-serine
- OASSase
O-acetyl-L-serine sulfhydrylase
- POPOP
1,4-bis-(5-phenyl-2-oxazolyl)-benzene
- PPO
2,5-diphenyloxazole
This is no. 9 in the series Regulation of Sulfate Assimilation in Plants 相似文献
18.
James P. Ferris Gözen Ertem Vipin Agarwal 《Origins of life and evolution of the biosphere》1989,19(2):165-178
The reaction of the 5-AMP with water soluble carbodiimide (EDAC) in the presence of Na+-montmorillonite 22A results in the formation of 2,5-(pA)2 (18.9%), 3,5-(pA)2 (11%), and AppA (4.8%). When poly(U) is used in place of the clay the product yields are 2,5-(pA)2 (15.5%), 3,5-(pA)2 (3.7%) and AppA (14.9%). The 3,5-cyclic dinucleotide, 3,5-c(pA)2, is also formed when poly(U) is used. AppA is the principal reaction product when neither clay nor poly(U) is present in the reaction mixture. Products which contain the phophodiester bond are formed at different ionic strengths, pH and temperatures using Na+-montmorillonite. Phosphodiester bond formation was not observed when Cu2+-montmorillonite was used or when DISN was used in the place of EDAC. The extent catalysis of phophodiester bond formation varied with the particular clay mineral used. Those Na+-clays which bind 5-AMP more strongly are better catalysts. Cu2+-montmorillonite, which binds 5-AMP strongly, exhibits no catalytic activity. 相似文献
19.
During chloroplast development in the primary leaves of Phaseolus vulgaris, the extractable activity of adenosine 5-phosphosulfate sulfotransferase increased ten-fold. When chloroplast development took place in air enriched with 3.5 l H2S·l-1 there was a decrease in adenosine 5-phosphosulfate sulfotransferase activity. Cyst(e)ine in concentrations up to 1 mM (in the external medium) did not affect the increase in adenosine 5-phosphosulfate sulfotransferase activity in intact plants. In plants with excised roots, 0.75 mM cyst(e)ine inhibited this increase. In green primary leaves, H2S or cyst(e)ine treatment resulted in a decrease of extractable adenosine 5-phosphosulfate sulfotransferase activity. In intact plants, this effect of cyst(e)ine was observed at a concentration of 1 mM, and in plants with excised roots, 0.25 mM had a comparable effect.In developing plants, the extractable activities of O-acetyl-L-serine sulfhydrylase (EC 4.2.99.9) and ribulosebisphosphate carboxylase (EC 4.1.1.39.) were not affected by H2S or cyst(e)ine.Abbreviations APS
adenosine 5-phosphosulfate
- APSSTase
adenosine 5phosphosulfate sulfotransferase
- BSA
bovine serum albumin
- DTE
dithioerythritol
- EDTA
ethylenediaminetetra-acetic acid
- OASSase
O-acetyl-L-serine sulfhydrylase
- PAPS
adenosine 3-phosphate 5-phosphosulfate
- POPOP
1,4 Di 2-(5-phenyloxazolyl)-benzene
- PPO
2,5-diphenyloxazol
- RubP
ribulose-bisphosphate
- RubPCase
ribulosebiphosphate carboxylase
This is no. 8 in the series Regulation of Sulfate Assimilation in Plants. The term cysteine is used when it is clear that cystine is not involved; cyst(e)ine is used for an undefined mixture of cysteine and cystine. The concentrations are expressed in all cases relative to cysteine 相似文献
20.
Kojima C Kawashima E Sekine T Ishido Y Ono A Kainosho M Kyogoku Y 《Journal of biomolecular NMR》2001,19(1):19-31
The sugar conformation of a DNA decamer was studied with proton-proton 3J coupling constants. Two samples, one comprising stereospecifically labeled 2-R-2H for all residues and the other 2-S-2H, were prepared by the method of Kawashima et al. [J. Org. Chem. (1995) 60, 6980–6986; Nucleosides Nucleotides (1995) 14, 333–336], the deuterium labeling being highly stereospecific 99% for all 2-2H, 98% for 2-2H of A, C, and T, and 93% for 2-2H of G). The 3J values of all H1-H2 and H1-H2 pairs, and several H2-H3 and H2-H3 pairs were determined by line fitting of 1D spectra with 0.1–0.2 Hz precision. The observed J coupling constants were explained by the rigid sugar conformation model, and the sugar conformations were found to be between C3-exo and C2-endo with m values of 26° to 44°, except for the second and 3 terminal residues C2 and C10. For the C2 and C10 residues, the lower fraction of S-type conformation was estimated from JH1H2 and JH1H2 values. For C10, the N–S two-site jump model or Gaussian distribution of the torsion angle model could explain the observed J values, and 68% S-type conformation or C1-exo conformation with 27° distribution was obtained, respectively. The differences between these two motional models are discussed based on a simple simulation of J-coupling constants. 相似文献