An index of biotic integrity based on fish assemblages for subtropical streams in southern Brazil

Several methods for calculating indices of biological integrity (IBIs) have been developed for different ecogeographic regions of the world. All of them calculate IBI scores by comparing against reference sites or historical data on fish assemblage composition. Because of intensive agriculture and urbanization in our study area, we located no reference sites, and historical information about fish assemblage composition did not exist. Instead, we developed hypothetical reference scores based on seasonal electrofishing surveys at six study sites in adjacent but geomorphologically different watersheds. Our IBI included 10 metrics that varied with degree of degradation. We found that Shannon–Wiener indices varied significantly between seasons, indicating significant changes in species composition. Therefore, we calculated seasonal IBI scores also, but these did not significantly differ from each streams general IBI score, which was calculated on the basis of four samples per site. General stream IBI scores reflected differing levels of anthropogenic disturbance.     

Seasonal variation in reef fish assemblages in the environmentally extreme southern Persian/Arabian Gulf

The southern Persian/Arabian Gulf experiences extreme seasonal temperature variation (> 20 °C) making it among the most hostile reef environments on Earth. Previous anecdotal evidence has suggested that seasonal temperature changes may influence regional reef fish assemblages, but to date research has been limited. To examine the influence of temperature on reef fish abundance and composition, we performed visual surveys in summer and in winter over three years at three reefs in the southern Gulf (Dhabiya, Saadiyat and Ras Ghanada). Overall abundance of fishes was 40% higher in summer than in winter, and multivariate analyses showed strong and significant differences in overall seasonal community structure, consistent at all sites and across all years. Seasonal differences were largely driven by nine of the 30 observed species, which together accounted for 70% of the divergence in community structure between summer and winter. Of these nine species, Lutjanus ehrenbergii, Lutjanus fulviflamma, Plectorhinchus sordidus and Abudefduf vaigiensis were significantly more abundant in summer, Parupeneus margaritatus and Acanthopagrus bifasciatus, were significantly more common on reefs in winter. We discuss these changes in terms of seasonal physiological and ecological constraints, and explore the implications of these changes on the functional ecology of reef fishes in this thermally variable and extreme environment.

     

Diel variation of phytoplankton functional groups in a subtropical reservoir in southern Brazil during an autumnal stratification period

A knowledge of diel variation and the vertical distribution of phytoplankton communities may contribute to a better understanding of the driving factors of key species. Applying functional-group classification provides important information on the causes of species selection in the pelagic community. The diel variation of phytoplankton functional groups was analysed during an autumnal stratification period with the aim of understanding their changes in the vertical position related to light, mixing regime and grazing pressure. Phytoplankton and zooplankton communities were sampled every 4 h during a 24-h period in a vertical profile in a subtropical meso-eutrophic reservoir. Strong stratification during a 24-h cycle and a mixed clear epilimnion with partial atelomixis marked the autumn season in the Faxinal reservoir, southern Brazil. The highest phytoplankton densities and biomass were found during the second part of the day, a general pattern reported in the literature, and may be explained by zooplankton dynamics. During the 24-h cycle, phytoplankton functional groups lacking a self-regulating capacity and those able to regulate their vertical position were vertically segregated in the lake. The diel behaviour of both groups was driven by the mixing regime (including atelomixis), light and zooplankton grazing pressure.     

Diel variation in body carotenoid content and feeding activity in marine zooplankton assemblages

The relationship between diel variation in body carotenoid contentand feeding activity of zooplankton from Los Angeles Harbor.California, was investigated during two time series of 24h and32h, in August 1983 and May 1984. Carotenoid levels varied significantly(t-test. p<0.01) during each time series, with peak levelsoccurring around midnight. Feeding activity also exhibited anight time peak during each experiment. The regression of carotenoidcontent on feeding activity explained 87% and 82% of the variancein either parameter in the August and May experiments respectively.However, the regression equations varied from one experimentto the next. Between-experiment differences in the relationbetween carotenoid content and feeding activity and in the meancarotenoid levels over each time series may be related to differencesin phytoplankton concentration and composition during each experiment.     

Diel variation in diet composition of a riverine fish community

Although diel food habit studies have been undertaken on a number of individual species, few studies have examined diel variation in the diets of fish communities. We examined the diel diet variation and feeding periodicity of a fish community in the Juniata River, Pennsylvania. Nine species, totalling 1,098 fish, were collected at 4-h intervals over a 24-h period in October 1989, in numbers sufficient to describe their diel variation in diet composition. Diel variation in diet composition was evident in all species, as no single prey taxon was dominant in the diet of any species during any 4-h interval. Ephemeropterans were the most important prey taxa for four species of centrarchids, whereas chironomids were the main prey of banded killifish, mimic shiners, and spotfin shiners. Algae was the major component in the diet of spottail shiners, whereas bluntnose minnows contained mostly detritus. Feeding activities of rock bass, redbreast sunfish, and pumpkinseed occurred at low levels throughout the day; peak feeding occurred from 2000 to 0400 hours. Food consumption of smallmouth bass increased throughout the day with peak consumption occurring at 2000 hours. Non-centrarchids fed little during daylight hours and showed peak activity at 2000–2400 h. Construction of a 24-hour diet from six 4-h interval estimates and feeding periodicity data provided a comprehensive representation of the diel feeding ecology of all species collected.     

Correction to: Seasonal variation in reef fish assemblages in the environmentally extreme southern Persian/Arabian Gulf

Coral Reefs - This erratum is published as citation for article in the reference list needs to be read as.     

Diel variation in availability and vulnerability of fish to a survey trawl

The effect diel variation in availability and vulnerability has on the fish capture process of a groundfish survey trawl was examined from data collected during an experiment measuring fish escapement underneath the footgear. The survey trawl was significantly more efficient at night in capturing American plaice, Hippoglossoides platessoides, and yellowtail flounder, Limanda ferruginea, but no difference was found in catches of Atlantic cod, Gadus morhua. This increase in capture efficiency at night is related to an increase in availability and vulnerability associated with diel variation in light intensity. No evidence of diel vertical migration was found and changes in availability were linked to visual dependent gear avoidance by the fish. Regardless of light conditions, the survey trawl had a very low capture efficiency for juveniles of the three species studied. Escapement of this size group was extremely high during both day and night periods due to a fast towing speed, use of large bobbin gear, and possible mesh selection.     

Nutrient limitation and algal blooms in urbanizing tidal creeks

Tidal creeks are commonly found in low energy systems on the East and Gulf Coasts of the United States, and are often subject to intense watershed human development. Many of these creeks are receiving urban and suburban runoff containing nutrients, among other pollutants. During the period 1993-2001, we studied three tidal creeks located in southeastern North Carolina, a rapidly urbanizing area. All three creeks received anthropogenic nutrient loading. Oligohaline to mesohaline stations in upper tidal creek regions had much higher nutrient (especially nitrate-N) concentrations than lower creek areas, and hosted spring and summer phytoplankton blooms that at times exceeded 200 μg chlorophyll a l⁻¹. Phytoplankton biomass during winter was low at all stations in all three creeks. Spring and summer nutrient addition bioassay experiments were conducted to characterize the nutrients limiting phytoplankton growth. Water from high salinity stations in all three creeks always showed significant positive responses to nitrate-N inputs, even at concentrations as low as 50 μg N l⁻¹. Low salinity stations in upper creek areas often showed significant responses to nitrate-N inputs, but on occasion showed sensitivity to phosphorus inputs as well, indicating the influence of anthropogenic nitrate loading. During several experiments, one of the upper stations showed no positive response to nutrient inputs, indicating that these stretches were nutrient replete, and further phytoplankton growth appeared to be light-limited either by phytoplankton self-shading or turbidity. Water from upper creek areas yielded much higher chlorophyll a concentrations in bioassay experiments than did lower creek water. In general, these urbanizing tidal creeks were shown to be very sensitive to nitrogen loading, and provide a physical environment conducive to phytoplankton bloom formation in nutrient-enriched areas. Tidal creeks are important ecological resources in that they are considered to be nursery areas for many species of fish and shellfish. To protect the ecological function of these small, but very abundant estuarine systems, management efforts should recognize their susceptibility to algal blooms and focus on control of nonpoint source nutrient inputs, especially nitrogen.     

Diel differences in fish assemblages in nearshore eelgrass and kelp habitats in Prince William Sound,Alaska

The importance of a particular habitat to nearshore fishes can be best assessed by both diurnal and nocturnal sampling. To determine diel differences in fish assemblages in nearshore eelgrass and understory kelp habitats, fishes were sampled diurnally and nocturnally at six locations in western Prince William Sound, Alaska, in summer 2007. Abundance of fish between day and night were similar, but species composition and mean size of some fish changed. Species richness and species diversity were similar in eelgrass during the day and night, whereas in kelp, species richness and species diversity were greater at night than during the day. In eelgrass, saffron cod (Eleginus gracilis) was the most abundant species during the day and night. In kelp, the most abundant species were Pacific herring (Clupea pallasii) during the day and saffron cod at night. Diel differences in fish size varied by species and habitat. Mean length of saffron cod was similar between day and night in eelgrass but was greatest during the day in kelp. Pacific herring were larger at night than during the day in kelp. Diel sampling is important to identity nearshore habitats essential to fish and help manage fish stocks at risk.     

Year-to-year variation in larval fish assemblages of the Southern North Sea

In order to test the temporal stability within and the reproducibility of larval fish assemblages between years, the larval fish assemblage at Helgoland Roads, North Sea (NE Atlantic) was quantitatively sampled almost daily from January 2003 to December 2005. The survey resulted in a total of 462 samples containing 50,632 larval fish of at least 42 taxa. In winter the larval fish assemblage was mainly dominated by larvae emerging from demersal eggs. This changed gradually to larvae hatching from pelagic eggs. Larvae from pelagic eggs dominated the ichthyoplankton assemblage in summer. A remarkably stable seasonality in terms of dominance patterns with recurring, season-specific fish assemblages was observed over the 3 years, despite substantial variation in environmental conditions such as a temperature difference of almost 20°C between summer and winter. The lesser sandeel (Ammodytes marinus), was the only species which showed significant fluctuations in abundance between the years. After removal of this species from the analysis, the dominance patterns of the remaining fish species were almost identical between years.     

Effect of nutrient loading on biogeochemical processes in tropical tidal creeks

The effect of increased nutrient loads on biogeochemical processes in macrotidal, mangrove-lined creeks was studied in tropical Darwin Harbour, Australia. This study uses an integrative approach involving multiple benthic and pelagic processes as measures of ecosystem function, and provides a comparison of these processes in three tidal creeks receiving different loads of treated sewage effluent. There were significant differences in process rates between Buffalo Creek (BC) (hypereutrophic), which receives the largest sewage loads; Myrmidon Creek (MC) (oligotrophic–mesotrophic) which receives smaller sewage inputs; and Reference Creek (RC) (oligotrophic) which is comparatively pristine. Benthic nutrient fluxes and denitrification were more than an order of magnitude higher and lower, respectively, in BC and denitrification efficiency (DE) was <10%. Pelagic primary production rates were also much higher in BC but respiration exceeded primary production resulting in severe drawdown of O₂ concentrations at night. Hypoxic conditions released oxide-bound phosphorus and inhibited coupled nitrification–denitrification, enhancing benthic nitrogen and phosphorus fluxes, leading to a build-up of excess nutrients in the water column. Poor water quality in BC was exacerbated by limited tidal flushing imposed by a narrow meandering channel and sandbar across the mouth. In contrast to BC, the effect of the sewage load in MC was confined to the water column, and the impact was temporary and highly localized. This is attributed to the effective flushing of the sewage plume with each tidal cycle. Denitrification rates in MC and RC were high (up to 6.83 mmol N m^?2 day^?1) and DE was approximately 90%. This study has identified denitrification, benthic nutrient fluxes and pelagic primary production as the biogeochemical processes most affected by nutrient loading in these tidal creek systems. Physical process play a key role and the combined influence of nutrient loading and poor tidal flushing can have serious consequences for ecosystem functioning.     

Annual trend of fish assemblages associated with FADs in the southern Tyrrhenian Sea

A study on fish assemblage associated with fish aggregating devices (FADs) in Sicily was carried out between January 2000 and January 2001. With a fortnightly periodicity, 156 experimental hauls were carried out by means of a purse seine in a FAD‐containing marine section banned to commercial fishing. A total of 14 229 fish specimens belonging to six families and 10 species was found. These species were Balistes carolinensis, Caranx crysos, Naucrates ductor, Seriola dumerili, Seriola fasciata, Tachurus picturatus, Coryphaena hippurus, Schedophilus ovalis, Thunnus thynnus, Polyprion americanus and showed all young‐of‐the‐year undergoing a rapid growth. The applied ordination technique highlighted the existence of four assemblage periods describing the annual trend. The results confirm that fish assemblages associated with FADs are related to season, following a fish colonization tied to natural recruitment. Comparison of the ecological indices across the four periods showed that the assemblages in the periods from summer to winter were more structured than those in spring. The quantity of individuals also showed a strong variation peaking in the summer period. The results of this study reveal that FADs represent a particular nursery area for the associated species that could influence their survival.     

Riparian ecotones and spatial variation of fish assemblages in Portuguese lowland streams

The first results of a long-term study on the role of riparian ecotones on the population and community dynamics of Iberian stream fish are presented and discussed. Riparian and macrophyte cover, bank slope and depth were among the most important variables affecting fish distribution. In general small fish favoured shallow areas with high macrophyte cover, whereas large fish dominated in deep areas with a high riparian cover. Slight spatial changes in terrestrial prey use were found suggesting a minor role for this resource during autumn. Finally, no significant spatial differences were found for linear growth, although some differences were obtained for the condition factor.     

Functional convergence of fish assemblages in urban streams of Brazil and the United States

The aim of this study was describe functional faunal assemblages occurring in streams with high influence of urbanization in USA and Brazil to answer the question whether similar biological traits of fish assemblages would be found between streams with high influence of urbanization in USA and Brazil. We compiled data on the structure and composition of freshwater fishes in 46 urban streams in the USA and 10 urban streams in Brazil. Data on functional traits was established in accordance with ordinal data on abundance. Cluster analysis was conducted to examine relationships among species composition across all sites sampled and to uncover patterns in functional traits of the fish assemblages by nonmetric multidimensional scaling (NMS). The cluster analysis separated the biogeographic regions in relation to the fish fauna composition. However, the ordination analysis (NMS) did not reveal differences between functional traits in Brazil and USA urban fish assemblages, suggesting functional similarity of very disparate zoogeographic assemblages.     

Spatial and temporal variation in species composition of dung beetle assemblages in southern Ireland

Abstract. 1. This study attempts to identify the main community characteristics that contribute to variability in dung beetle assemblage composition and structure across a range of spatial and temporal scales.
2. Dung beetle assemblages ( Aphodius , Sphaeridium, and Geotrupes species) were monitored by dung-baited pitfall trapping at 10-day intervals during the seasonally active period at eleven sites in southern Ireland. Three of the sites were monitored over at least 2 years between 1991 and 1996.
3. Although the species composition of the above taxonomic groups was comparable among sites and years, relative abundances of component species varied considerably. Detrended correspondence analysis ordinations indicated a similar level of variability in dung beetle assemblage structure among years, and among sites ≈1–180 km apart.
4. Processes that may contribute to spatio-temporal variability in dung beetle assemblages are discussed, and strategies for future research are suggested.     

Karyotype diversity and fish conservation of southern field from South Brazil

Six hundred and twenty-seven specimens of neotropical fishes belonging to thirteen species/populations from southern field (Paraná, State, Brazil) were karyotypicaly analyzed between 2000 and 2006. The study biogeographic region is characterized as a divisor of waters presenting tributaries and headboards of the hydrographic basins of the rivers Tibagi, Iguaçu, Ivaí, and Paranapanema (Upper Paraná Basin) and Ribeira river (East Basin). Two patterns of karyotypic diversification were verified, being one more conserved in the karyotypic macrostructure and the other more diversified. The understanding at of this variability with views to the citotaxonomy and biological conservation was interpreted at the light of (1) the historical biogeography, (2) of the evolutionary time, and (3) of the biology of the species, indicating the study area as highly relevant for the selection of evolutionary potential.     

Spatiotemporal variability of demersal fish larvae assemblages in the southern region of the California Current

An analysis was conducted of the community structure variability of demersal fish larvae and its relationship with environmental forcing on the west coast of the Baja California Peninsula (25–31°N). The information comes from two data sets of oceanographic cruises in 1997–2000 and 2006–2010. From a total of 190 identified taxa, a high number of species (71) was shared throughout the peninsula. The spatiotemporal contrast in the community structure suggests the separation of two groups (northern and southern) whose boundary is located around Punta Eugenia. The northern group showed an alternate dominance of species with a subarctic-transitional faunistic affinity during the winter and spring and species of a subtropical affinity during summer–autumn. In contrast, the dominant taxa in the southern group have a tropical–subtropical affinity throughout the year, although some taxa of subarctic-transitional affinity also occur during winter–spring. In the spatiotemporal scale, these results suggest that the major cause that modulates the extension and structure of the assemblages is the seasonal oceanic dynamics. Moreover, the intensity of warming or cooling events (El Niño and La Niña) influences the structure of the community on an interannual scale by displacing the zonal boundaries of the groups’ distribution.     

Species assemblages of pelagic fish embryos in the southern North Sea between 1984 and 2000

The occurrence and abundance of the pelagic eggs of southern North Sea spring-spawning fish were analysed between 1984 and 2000. Species number varied between six (1986) and 14 (1999) and was positively correlated with sea surface temperature. With one exception, dab eggs were always the most abundant and usually highly dominant. Ranking of species depended on temperature, but no significant differences in ranking between years was discernible. Although with the increase in temperature in the 1990s a change in species assemblage was evident [species belonging to the boreal-Mediterranean (Lusitanian) group became more apparent in the species assemblage] this did not lead to an increased species diversity (Shannon Index) or a change in other community parameters. It appears that the recent developments regarding spawning stock biomass of commercial North Sea fish is reflected in the declining egg abundance of the respective commercial and larger species (i.e. cod, flounder, plaice) and an increase in abundance of the eggs of small species (i.e. long rough dab, rockling) over the years. Received in revised form: 5 November 2001 Electronic Publication     

Diel variation in feeding and vertical distribution of ten co-occurring fish species: consequences for resource partitioning

The diel variations in feeding behaviour and vertical distribution were determined for ten species of a tropical fish community in a shallow SE Sri Lankan reservoir. The fish community consisted of two introduced exotic tilapias and eight indigenous riverine species including five cyprinids, one clarid, one hemiramphid and one gobid. Multi-mesh gillnets dividing the water column in six depth strata were set with a six-hour interval throughout four 24-hour periods. The study of the diel variation in feeding behaviour was based on analysis of catch data, gut contents and gut fullness per setting time. The diel variation in vertical distribution was determined per species for each of the six depth-strata. Feeding behaviour and vertical distribution differed significantly among species and for most species throughout the 24-hour period. Feeding behaviour and vertical distribution were correlated. The status of whether or not a fish is feeding determines if the trophic and spatial resource dimensions are interrelated. Resource partitioning along the spatial dimension may reduce exploitative competition at the time of feeding, whereas it may limit interference competition or predation during non-feeding periods. This revised version was published online in July 2006 with corrections to the Cover Date.