石蒜属植物分支系统学分析

基于37个形态学、解剖学、孢粉学和细胞学性状及解剖学性状之外的28个形态学、孢粉学和细胞学性状,分别对石蒜属进行分支系统学分析,试图建立石蒜属种间的系统发育关系。利用PAUP^*软件分别构建了最大简约树(MP),所得树的拓扑结构是一致的。同时,基于解剖学9个性状,对石蒜、换锦花、忽地笑、江苏石蒜、长筒石蒜、乳白石蒜、夏水仙、红兰石蒜、安徽石蒜、短蕊石蒜、中国石蒜11个种进行系统发育树构建,其结果也是支持上述系统发育树的。系统发育树结构结果表明,石蒜属16种明显聚为两大类:石蒜、玫瑰石蒜、稻草石蒜和江苏石蒜;广西石蒜、红兰石蒜、换锦花、香石蒜、夏水仙、长筒石蒜、安徽石蒜、中国石蒜、忽地笑、乳白石蒜、短蕊石蒜和陕西石蒜。除换锦花、红兰石蒜及江苏石蒜系统发育位置不同之外,大类群的划分与RAPD指纹图谱基本一致。类群一均属于石蒜亚属(Lycoris亚属)。类群二又可以聚为两小类:广西石蒜、红兰石蒜、换锦花、香石蒜、夏水仙归为一类;长筒石蒜、安徽石蒜、中国石蒜、忽地笑、乳白石蒜、短蕊石蒜和陕西石蒜归为一类。前一子类群除广西石蒜外,都属于整齐花亚属(Symman thus亚属)。后一子类群除长筒石蒜与安徽石蒜外,均属于石蒜亚属(Lycoris亚属)。因此,花冠整齐与否是一个重要的分类特征,但作为石蒜属植物亚属的划分依据,没有得到本研究支持。而在本文中,雄蕊与花被片的位置关系可以作为大分类群划分依据,能否依此来对石蒜属植物亚属进行划分,仍需探讨。另外研究表明叶微形态特征在研究种间亲缘关系时,具有一定的作用。而在种间亲缘关系鉴定时,出叶期不应成为重要的依据。同时研究还表明中国石蒜与忽地笑具有非常近的亲缘关系,与形态学研究一致。     

Studies on inoculation of aerial algae. I. Semi-mass culture and quantification of algal color of Klebsormidium flaccidum (Ulotrichales, Chlorophyceae) sprayed on to concrete board

This paper describes methods of semi-mass culture and the quantification of algal color sprayed on a concrete board of the alga Klebsormidium flaccidum (Küitzing) S. Mattox et Blackwell. The alga was cultured in 100 L tanks normally used for hatching brine shrimp, with aeration from the deepest parts of the slanting sides. Initially mean algal density increased rapidly and attained 9.1 times the original density after 4 weeks. Subsequently, increase of the algal density was slow, and the density became 16.1 times the original level after 8 weeks. The alga cultured in this study was sprayed on to a concrete board using an agricultural sprayer. The relationship between the algal density on the board and its color, expressed as L*a*b* color space, was quantified. The chromaticity was maximum as the algal density on the board was about 5 g/m², and the color was most vivid. When the algal density was more than 20 g/m², both the lightness and chromaticity changed slightly, and the color became dark green.     

物种对资源竞争的动力机制及数值模拟

建立了集合种群物种在两个斑块中对资源竞争的数学模型,并进行了数值模拟实验,结果表明：（1）通过R^＊来预测竞争物种的结局,存在几种可能性：一是具有低R^＊值的物种竞争取代高R^＊值的物种;二是具有不同R^＊值的物种,甚至是具有相同R^＊值的物种也存在共存的可能性;三是具有高R^＊值的物种也可以竞争排斥低R^＊值的物种,结论存在不确定性。（2）竞争物种的随机迁移形成了源一汇结构,对物种竞争共存具有促进作用,但弱的资源利用者（较高的R^＊）的迁移率不宜过高。（3）在种群统计率相同的条件下,资源增长率差异越大,越不利于消费者物种的共存;若种群统计率不相同,在资源增长率相同的情况下,物种共存又是不可能的,在自然界中,物种共存需要资源增长率的差异。（4）不同类型的资源增长对竞争物种的稳定性的影响是不同的。     

云南地区恒河猴MHC部分基因频率及多态性的分析

目的不同种群恒河猴（Macaca mulatta）主要组织相容性复合体（major histocompatibility complex,MHC）基因的差异性,很大程度上影响了用其作为动物模型的实验研究结果的稳定性、可靠性和可重复性。清晰了解云南地区恒河猴种群免疫遗传学背景对于运用该种群开展各项研究非常重要。恒河猴基因Mamu（Macaca mulatta）-A＊01就被公认与猴免疫缺陷病毒（SIV）的感染与延缓病程相联系。Mamu-Ⅱ类等位基因Mamu-DRB1＊0306、0309有研究表明也与SIV感染后的病程发展有关。方法针对目前研究热点的Mamu-A＊01基因及Ⅱ类Mamu-DRB1＊0306、0309基因,采用序列特异性引物-聚合酶链式反应方法（PCR-SSP）,对云南地区的140只恒河猴（其中92只来源于云南景东野外自然繁殖群、48只来源于本灵长类中心自繁群）进行检测。并对阳性样本用部分测序结合单链构象多态性分析（SSCP）的方法加以验证。结果Mamu-A＊01检测结果为阴性。Mamu-DRB1＊0306、0309基因频率分别为32%及45%。结论初步显示云南地区恒河猴种群Mamu-A＊01基因可能缺失或基因频率很低,但存在Mamu-DRB1＊0306、0309基因。初步证明SSCP方法代替大规模测序是可行的,为云南地区恒河猴在AIDS研究中的应用提供了部分依据,一定程度上填补了该种群的遗传背景资料。     

HLA-A*2402-BSP在大肠杆菌中的优化表达及其四聚体的制备和鉴定

HLA-A*2402是中国人群中最常见的等位基因之一,为研究该基因型人群的人巨细胞病毒(HCMV)特异性细胞毒T细胞(CTL)免疫应答,需要制备负载相应抗原肽的HLA-A*2402四聚体。以RT-PCR方法克隆HLA-A*2402重链基因的cDNA,并构建了羧基端融合生物素化酶BirA底物肽(BSP)的HLA-A*2402重链胞外域融合蛋白(HLA-A*2402-BSP)的表达载体,但该载体不能在大肠杆菌(E.coli)中有效表达HLA-A*2402-BSP融合蛋白;通过对氨基端(N端)区域编码区的密码子进行优化,构建了同义突变的HLA-A*2402-BSP表达载体,融合蛋白在E.coli中获得了高效表达。进而制备了负载HLA-A*2402限制性HCMVpp65341-349抗原肽(QYDPVAALF,QYD)的可溶性HLA-A*2402-QYD单体分子和四聚体,获得的四聚体具有与HLA-A24 供者抗原特异性CTL的结合活性,特异性CTL的频率为总CD8 T细胞的0·09%～0·37%。这些结果为进一步研究HLA-A*2402限制性的特异性CTL免疫应答规律奠定基础。     

A组轮状病毒VP5*和VP8*的表达和免疫学性质研究

轮状病毒是引起婴幼儿腹泻的主要病原,VP4是RV重要的抗原蛋白,在早期病毒与细胞黏附过程中发挥重要作用,包括受体结合和细胞渗透。在细胞黏附过程中,VP4易被切割成VP5*和VP8*两个片段并以此增强病毒感染性。为了深入研究VP5*和VP8*的免疫学性质,进一步评价其应用前景,本研究从TB-Chen株RV基因组中编码VP4蛋白基因上克隆了VP5*和VP8*开放读码框核苷酸序列,构建了表达质粒,在原核大肠杆菌系统中重组表达了VP5*和VP8*蛋白,进一步分析了它们的免疫学性质。结果显示,VP5*和VP8*可在E.coli中高效表达,重组蛋白VP5* (rVP5*)和VP8* (rVP8*)可诱导免疫豚鼠产生特异性血清抗体,这些抗体可特异性识别自身蛋白（rVP5*或rVP8*）,可识别来自的TB-Chen株重组VP4蛋白,并可识别SA11和Wa感染的MA104细胞中合成的病毒VP4蛋白。这些结果表明,rVP5*和rVP8*蛋白具有较高的免疫原性,抗rVP5*和抗rVP8*的抗体具有高度特异性和交叉反应性。     

Parasite histories and novel phylogenetic tools: alternative approaches to inferring parasite evolution from molecular markers

Parasitological research is often contingent on the knowledge of the phylogeny/genealogy of the studied group. Although molecular phylogenetics has proved to be a powerful tool in such investigations, its application in the traditional fashion, based on a tree inference from the primary nucleotide sequences may, in many cases, be insufficient or even improper. These limitations are due to a number of factors, such as a scarcity/ambiguity of phylogenetic information in the sequences, an intricacy of gene relationships at low phylogenetic levels, or a lack of criteria when deciding among several competing coevolutionary scenarios. With respect to the importance of a precise and reliable phylogenetic background in many biological studies, attempts are being made to extend molecular phylogenetics with a variety of new data sources and methodologies. In this review, selected approaches potentially applicable to parasitological research are presented and their advantages as well as drawbacks are discussed. These issues include the usage of idiosyncratic markers (unique features with presumably low probability of homoplasy), such as insertion of mobile elements, gene rearrangements and secondary structure features; the problem of ancestral polymorphism and reticulate relationships at low phylogenetic levels; and the utility of a molecular clock to facilitate discrimination among alternative scenarios in host-parasite coevolution.     

基部藓类分子系统学研究

基部藓类是稳定地处于藓类系统发育树基部的类群.它包括7纲,2亚纲,10目,10科,34属,637种.基部藓类虽然只占藓类种类的5％,但由于其内部各类群孢子体形态极为丰富,因此对于理解整个藓类植物的系统发育具有重要意义.通过对48个种(36个藓类、4个维管植物、2个角苔、4个苔类和2个藻类)的9个DNA片段(NU:26S,18S; MT:nad5,cox1; CP:rbcL,rps4,cp-LSU,cp-SSU,atpB)进行分子系统学分析,综合最大似然法(maximum likelihood)、最大简约法(most parsimony)和贝叶斯分析(Bayesian inference)方法的建树结果,理清了前人研究中存在冲突的类群之间的关系并为已确定的关系提供了更高的支持率.研究结果如下:(1)藻苔纲和泥炭藓纲互为姐妹类群,处于整个藓类的最基部;(2)黑藓纲与黑真藓纲互为姐妹类群(3)长台藓纲和具齿藓类组成单系;(4)四齿藓纲是所有具齿藓类的基部类群;(5)烟杆藓亚纲处于真藓纲的最基部,其次是短颈藓亚纲.以上结论在分子系统树上得到了很高的支持率.     

Higher-level classification of the Archaea: evolution of methanogenesis and methanogens

We used a phylogenetic approach to analyze the evolution of methanogenesis and methanogens. We show that 23 vertically transmitted ribosomal proteins do not support the monophyly of methanogens, and propose instead that there are two distantly related groups of extant archaea that produce methane, which we have named Class I and Class II. Based on this finding, we subsequently investigated the uniqueness of the origin of methanogenesis by studying both the enzymes of methanogenesis and the proteins that synthesize its specific coenzymes. We conclude that hydrogenotrophic methanogenesis appeared only once during evolution. Genes involved in the seven central steps of the methanogenic reduction of carbon dioxide (CO(2)) are ubiquitous in methanogens and share a common history. This suggests that, although extant methanogens produce methane from various substrates (CO(2), formate, acetate, methylated C-1 compounds), these archaea have a core of conserved enzymes that have undergone little evolutionary change. Furthermore, this core of methanogenesis enzymes seems to originate (as a whole) from the last ancestor of all methanogens and does not appear to have been horizontally transmitted to other organisms or between members of Class I and Class II. The observation of a unique and ancestral form of methanogenesis suggests that it was preserved in two independent lineages, with some instances of specialization or added metabolic flexibility. It was likely lost in the Halobacteriales, Thermoplasmatales and Archaeoglobales. Given that fossil evidence for methanogenesis dates back 2.8 billion years, a unique origin of this process makes the methanogenic archaea a very ancient taxon.     

Analysis of HLA DR2&;DQ6 (DRB1*1501, DQA1*0102, DQB1*0602) Haplotypes in Iranian Patients with Multiple Sclerosis

Multiple sclerosis (MS) is prototype of inflammatory demyelinating disease of the central nervous system .The etiology of MS remains unclear, but according to current data the disease develops in genetically susceptible individuals and may require additional environmental triggers. The human leukocyte antigen (HLA) class II alleles (DRB1*1501, DQA1*0102, DQB1*0602) may have the strongest genetic effect in MS. In this study, the role of these alleles were investigated in 183 Iranian patients with multiple sclerosis and compared with 100 healthy individuals. HLA typing for DRB1*1501, DQA1*0102, DQB1*0602 was performed by polymerase chain reaction (PCR) amplification with sequence-specific primers (PCR-SSP) method. The results show that, HLA DR B1*1501 was significantly more frequent among MS patients (46% vs. 20%, PV = 0.0006) but DQA1*0102 haplotype was negatively associated with MS (30% vs. 50%, PV = 0.0049) and no significant association was found with DQB1*0602 and MS patients in comparison with control group (24% and 30%, PV = 0.43). No significant correlation was observed among these alleles with sex, type of disease; initial symptoms, expanded disability status scale (EDSS), as well as age at onset and familial MS. This study therefore indicates that there is no association of above HLA haplotypes with clinical presentation, disease duration, and disability in Iranian patients with MS which is in line with other previous studies in different ethnic groups.     

蜘蛛的精子发生

通过研究蜘蛛的精子形态和精子发生来探讨蜘蛛目的的系统发生,目前已越来越受到各国学者的重视。本文介绍国外近二十年来在这一领域的研究进展和成果,希望有助于在我国加速开展这方面的研究,深化对蜘蛛目的系统进化研究工作。     

Phylogenetic relationships among the lepidopteran and trichopteran suborders (Insecta) from the embryological standpoint1

Adopting the cladistic method in comparative embryology, 27 embryonic characters were analyzed to reconstruct the phylogenetic relationships among the lepidopteran and trichopteran suborders, viz., Annulipalpia, Integripalpia, Zeugloptera, Dacnonypha, Exoporia, Monotrysia, and Ditrysia. The resultant cladogram is basically coincident with that proposed by Kristensen . The order Trichoptera and Lepidoptera constitute a monophyletic group on the basis of one synapomorphy, the presence of well developed silk glands in embryos. The Trichoptera are separable from the Lepidoptera by the states of four characters. The Trichoptera, as a whole, are quite homogenous, and embryological data provide no rational ground for the separation of this order into the Annulipalpia and Integripalpia at a subordinal level. On the contrary, the embryonic development of the Lepidoptera becomes divergent from the most primitive condition to a specialized one according to suborders. The Zeugloptera are the sister group of all other Lepidoptera, because they share two apomorphies with the latter. The Dacnonypha are the most primitive next to the Zeugloptera, and have a sister-group relationship with the Exoporia + (Monotrysia + Ditrysia), being held together with the latter by five synapomorphies. Although the Exoporia retain almost as many plesiomorphic characters as the Dacnonypha, they have a sister-group relationship with the Monotrysia + Ditrysia, as inferred on the basis of two synapomorphies. The Monotrysia and Ditrysia have a sistergroup relationship, and are the most advanced groups in the Lepidoptera judging from their shared acquisition of many apomorphic characters.