AnimalFinder: A semi-automated system for animal detection in time-lapse camera trap images

Although the use of camera traps in wildlife management is well established, technologies to automate image processing have been much slower in development, despite their potential to drastically reduce personnel time and cost required to review photos. We developed AnimalFinder in MATLAB® to identify animal presence in time-lapse camera trap images by comparing individual photos to all images contained within the subset of images (i.e. photos from the same survey and site), with some manual processing required to remove false positives and collect other relevant data (species, sex, etc.). We tested AnimalFinder on a set of camera trap images and compared the presence/absence results with manual-only review with white-tailed deer (Odocoileus virginianus), wild pigs (Sus scrofa), and raccoons (Procyon lotor). We compared abundance estimates, model rankings, and coefficient estimates of detection and abundance for white-tailed deer using N-mixture models. AnimalFinder performance varied depending on a threshold value that affects program sensitivity to frequently occurring pixels in a series of images. Higher threshold values led to fewer false negatives (missed deer images) but increased manual processing time, but even at the highest threshold value, the program reduced the images requiring manual review by ~ 40% and correctly identified > 90% of deer, raccoon, and wild pig images. Estimates of white-tailed deer were similar between AnimalFinder and the manual-only method (~ 1–2 deer difference, depending on the model), as were model rankings and coefficient estimates. Our results show that the program significantly reduced data processing time and may increase efficiency of camera trapping surveys.     

A counting method for the number of Sternolophus rufipes and Hydrochara affinis in a noisy trap image

A quantitative survey of water scavenger beetles Sternolophus rufipes and Hydrochara affinis in paddy fields is essential not only for evaluating the impact of climate change on ecosystems but also for quantifying the stability of paddy fields. Many researchers classify insects in insect traps visually and manually count the number of individuals in each species. This manual survey method is time-consuming, fatiguing, and tedious. In this paper, we present a simple method to classify and count beetles in noisy trap images. The proposed method uses the beetles' body size and spots made by the light reflecting off the backs of beetles. We verify the method using images of beetles attached to the insect trap. The results demonstrate that the number of individuals in each species as counted by the proposed method and the manually counted number are statistically identical, which means that our method is sufficient to replace the existing manual counting method. Additionally, we briefly discuss the limitations of this counting method and ideas that could complement them.     

Can aphid-induced plant signals be transmitted aerially and through the rhizosphere?

Aphids, through their close association with plants, cause systemic release of semiochemicals. These may have negative effects on subsequent aphid colonisation and can also have positive roles with insects that are antagonistic to aphid development, for example parasitoids. One of the semiochemicals involved in host selection by aphids is methyl salicylate, and since this compound was shown to have a role as a plant stress signal, the hypothesis that aphids might facilitate identification of new plant signals was examined. Confirmation was obtained during an investigation of avoidance of unsuitable hosts by the lettuce aphid, Nasonovia ribis-nigri. (Z)-Jasmone was identified as a plant-derived semiochemical acting negatively for a number of aphid species, and positively for insect antagonists such as parasitoids and predators. However, when the compound was employed at 0.1 ppm in air above intact plants, these plants then attracted aphid parasitoids long after the (Z)-jasmone itself was no longer detectable. A specific interaction was proposed, since the (Z)-jasmone appeared to be selectively taken up by the plants. Aerial interactions between intact barley plants from different cultivars, which may be differentially releasing stress associated signals, can also influence acceptability to aphids. Furthermore, it has been shown that exudates from the roots of aphid-infested plants, grown hydroponically or in soil, cause intact plants to become more attractive to parasitoids.     

Environmental information from guano palynology of insectivorous bats of the central part of the United States of America

Bat droppings accumulate in caves, and the resultant guano contains a stratigraphic record of the environment analogous to the record from lake sediment and peat. The bats forage at night for insects; they return to the cave during the day to sleep and care for their young. They attach themselves to suitable perches in the cave ceiling, and their excrement accumulates on the floor below. Flying requires a lot of energy, and bats of temperate regions consume large numbers of night-flying insects. In some situations the guano can reach a depth of meters in hundreds to thousands of years, and it has a valuable chronostratigraphy. The bat scats occur as small pellets that represent the non-digestible portion of the animal's diet in the preceding few hours; hence the diet provides information about the time of the year the feeding occurred. Bat guano contains, among other things, insect fragments, hair, pollen, and mineral matter. Night-flying insects do not normally visit flowers for the pollen; many species do not eat during the flying phase of their life cycle, and those that do generally are nectar feeders. Although the insects are not after the pollen, they do fly through a pollen-laden environment, and the pollen and dust adheres to their bodies. The insects essentially act as living traps for airborne debris. The bats also are furry pollen traps; during grooming they ingest pollen and dust enmeshed in their fur, and this also is excreted. The pollen in an individual scat contains a record of the atmospheric pollen during a single day in the past. This kind of detail is rarely available from lake sediment. Chemical analysis of individual bat scats in a time series can chart the changing environment caused by agriculture, industry, volcanic dust, and a host of other details that depend only on the cleverness of the researcher. Careful ¹⁴C analysis can isolate the times when bats did not use the cave, and that may be useful in interpreting past conditions. If the insect types in the guano change over time, that may provide evidence of changing climate. Pollen was analyzed from guano samples taken from Tumbling Creek Cave near Protem, Missouri, USA. The cave contains a maternal colony of the Grey Bat (Myotis grisescens) that occupies the cave for a short time each year. Scats collected from the base of a 70 cm thick cone of guano yielded an AMS ¹⁴C date of 2810 ± 40 yr BP. The fecal material has a crumbly structure below the surface; it was of mahogany color (7.5 YR 2/1 to 3/2) and had no noticeable odor. Guano can be processed like normal sediment, but simple washing in a weak detergent solution followed by acetolysis appears adequate.     

Performance of diapausing parasitoid wasps,Habrobracon hebetor,after cold storage

The ectoparasitoid Habrobracon hebetor (Say) (Hymenoptera: Braconidae) is an important potential biological control agent for lepidopterous pests of stored products. We investigated the effects of long-term cold storage of diapausing and nondiapausing H. hebetor on their performance after cold storage. Mortality during storage increased with increasing storage duration, and the mortality of diapausing females was lower than that of nondiapausing females after 8, 12, and 16 weeks of storage. Longevity, egg laying, number of progeny produced, and time to 50% egg laying were all reduced, as compared with the culture females when parasitoids were reared at conditions that do not induce diapause. But, for females reared at 20 °C at conditions that induce diapause, all of these quality parameters did not differ from those of culture insects when the storage duration was 8 weeks or less. The percentage of female F1 offspring was always lower for cold stored insects than for the culture insects. Presence of a male after cold storage did not impact any of the quality parameters measured. Thus, rearing parasitoids at 20 °C and 10L:14D and then storing them for up to 8 weeks at 5 °C would produce parasitoids that are similar to culture parasitoids, except that the percentage of females is lower than that in the cultures (36% vs. 52%).     

Aggregation of parasitism risk in an aphid-parasitoid system: Effects of plant patch size and aphid density

Few studies have linked density dependence of parasitism and the tritrophic environment within which a parasitoid forages. In the non-crop plant-aphid, Centaurea nigra–Uroleucon jaceae system, mixed patterns of density-dependent parasitism by the parasitoids Aphidius funebris and Trioxys centaureae were observed in a survey of a natural population. Breakdown of density-dependent parasitism revealed that density dependence was inverse in smaller colonies but direct in larger colonies (>20 aphids), suggesting there is a threshold effect in parasitoid response to aphid density. The CV² of searching parasitoids was estimated from parasitism data using a hierarchical generalized linear model, and CV²>1 for A. funebris between plant patches, while for T. centaureae CV²>1 within plant patches. In both cases, density independent heterogeneity was more important than density-dependent heterogeneity in parasitism. Parasitism by T. centaureae increased with increasing plant patch size. Manipulation of aphid colony size and plant patch size revealed that parasitism by A. funebris was directly density dependent at the range of colony sizes tested (50–200 initial aphids), and had a strong positive relationship with plant patch size. The effects of plant patch size detected for both species indicate that the tritrophic environment provides a source of host density independent heterogeneity in parasitism, and can modify density-dependent responses.     

The diversity and fitness effects of infection with facultative endosymbionts in the grain aphid, Sitobion avenae

Mutualisms with facultative, non-essential heritable microorganisms influence the biology of many insects, and they can have major effects on insect host fitness in certain situations. One of the best-known examples is found in aphids where the facultative endosymbiotic bacterium Hamiltonella defensa confers protection against hymenopterous parasitoids. This symbiont is widely distributed in aphids and related insects, yet its defensive properties have only been tested in two aphid species. In a wild population of the grain aphid, Sitobion avenae, we identified several distinct strains of endosymbiotic bacteria, including Hamiltonella. The symbiont had no consistent effect on grain aphid fecundity, though we did find a significant interaction between aphid genotype by symbiont status. In contrast to findings in other aphid species, Hamiltonella did not reduce aphid susceptibility to two species of parasitoids (Aphidius ervi and Ephedrus plagiator), nor did it affect the fitness of wasps that successfully completed development. Despite this, experienced females of both parasitoid species preferentially oviposited into uninfected hosts when given a choice between genetically identical individuals with or without Hamiltonella. Thus, although Hamiltonella does not always increase resistance to parasitism, it may reduce the risk of parasitism in its aphid hosts by making them less attractive to searching parasitoids.     

The effects of artificial lighting on adult aquatic and terrestrial insects

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Flower model traps reduced thrips infestations on a pepper crop in field

A flower model trap developed by modifying an artificial yellow chrysanthemum flower was more attractive to flower thrips than commercial yellow sticky traps. Installation of these flower model traps (20 traps per 50 m² plot) was reported to reduce seasonal populations of Frankliniella intonsa (Trybom) (Thysanoptera: Thripidae) on strawberry flowers in greenhouses. In this study, we sought to determine if the installation of such flower model traps would reduce thrips populations in a pepper field. The traps were installed at the bottom of the plant canopy at varying densities (0, 5, 10, and 20 traps) in 20 plots (each 3 × 5 m²) using a completely randomized design. Thrips populations on pepper flowers were sampled from 1 to 29 July in 2009. All thrips sampled on the flowers were identified as F. intonsa. A significant effect of treatment and sampling date was found from repeated-measure analysis of variance. The highest density (20 traps per 15 m²) of traps significantly reduced the female and male F. intonsa population compared to the control by 61 and 49%, respectively. However, no difference in immature thrips numbers was found among the treatments. These results indicate that this flower model trap can be a useful tool for the management of flower thrips on field-grown peppers.     

Flight behaviour of vegetable pests and their natural enemies under different ultraviolet‐blocking enclosures

Ultraviolet (UV) radiation, particularly in the UV‐A + B range (280–400 nm) is a fraction of the solar spectrum that regulates almost every aspect of insect behaviour, including orientation towards hosts, alighting, arrestment and feeding behaviour. To study the role of UV radiation on the flight activity of five insect species of agricultural importance (pests Myzus persicae, Bemisia tabaci and Tuta absoluta, and natural enemies Aphidius colemani and Sphaerophoria rueppellii), one‐chamber tunnels were covered with six cladding materials with different light transmittance properties ranging from 2% to 83% UV and 54% to 85% photosynthetically active radiation (PAR). Inside each tunnel, insects were released from tubes placed in a platform suspended from the ceiling. Specific targets varying with insect species were placed at different distances from the platform. Evaluation parameters were designed for each insect and tested separately. The ability of insects to leave the platform was assessed, as well as the number of captures, eggs or mummies in each target, either sticky traps or plants. Our results suggest differences in flight activity among insect species and UV‐blocking nets. The UV‐opaque film drastically prevented aphids, and whiteflies from flying outside the tubes whereas T. absoluta, syrphids and parasitoids were not affected. Aphid flight behaviour was affected by the UV‐opaque film compared to the other nets, especially in the furthest target of the tunnel. Fewer aphids reached distant traps under UV‐absorbing nets, and significantly more aphids could fly to the end of tunnels covered with non‐UV‐blocking materials. Orientation of B. tabaci and T. absoluta was also negatively affected by the UV‐opaque film although in a different trend. Unlike aphids, differences in B. tabaci captures were mainly found in the closest targets. UV transmittance did not have any effects on parasitoids, and S. rueppellii, implying cues other than visual for these insects under our experimental conditions. Further effects of photoselective enclosures on greenhouse pests and their natural enemies are discussed.     

Starving Aphelinus asychis negatively affects host feeding and parasitism on Myzus persicae

Aphelinus asychis (Walker) is an effective biological control agent for many species of aphids found on various crops. To provide strategies for releasing these parasitoids into a crop ecosystem, the effects of a short-duration starvation experiment on A. asychis were measured under laboratory conditions using Myzus persicae (Sulzer) as the host on cabbage and chili pepper plants. The survival rate of starved A. asychis female adults decreased sharply as the starving time increased, and the longevity of the starved parasitoids also decreased significantly. The number of aphids killed by the parasitoids decreased gradually with the extended duration of starvation. In addition, the number of aphids on chili peppers and cabbages killed by starved A. asychis females over their lifespan was significantly lower than that in the control group. Our results indicated that a short period of starvation might not cause significantly negative effects on the parasitoids and may be beneficial for the control of M. persicae at low densities after 1?day; however, starvation for >1?day seriously affected the performance of A. asychis females over their entire lifespan. The parasitoids performed similarly when aphids were fed chili pepper or cabbage plants.     

Adult aquatic insects: Potential contributors to riparian food webs in Australia's wet–dry tropics

Abstract Changes in the abundance and biomass of aquatic and terrestrial aerial insects with distance (mid‐stream, 0, 10–15 and 160 m) from lowland streams were examined across the dry season landscape in Kakadu National Park, northern Australia. Malaise traps and sticky intercept traps were used to sample the insects at four streams, spaced over an area of 1650 km². Malaise and intercept catches were dominated by Diptera (flies and midges), both numerically and by biomass. Chironomid midges were the most abundant taxon, making up 43.4 and 51.0% of the malaise and intercept trap catches, respectively. However, most chironomids were small (less than 3 mm body length), contributing 34.9% to intercept trap biomass, but only 5.2% in malaise traps. Ceratopogonid midges and caddisflies (Trichoptera) accounted for most of the remaining adult aquatic insects. Major terrestrial components were Diptera and Hymenoptera in malaise traps and Coleoptera and Diptera in intercept traps. The total abundance and biomass of insects were much greater over streams and along the water's edge than in riparian (10–15 m) and savanna (160 m) habitats primarily because of the presence of large numbers of adult aquatic insects. The abundance and biomass of terrestrial insects in malaise traps showed no relationship with distance, but intercept trap catches suggested slightly greater abundances over the water and at the water's edge. The great abundance of aquatic insects relative to terrestrial insects close to streams suggests that they have the potential to be an important component of the diets of riparian insectivores, and predation may be an important pathway by which aquatic nutrients and energy are moved into terrestrial food webs.     

Temperature influences the handling efficiency of an aphid parasitoid through body size-mediated effects

It is well known that increasing the ambient temperature increases the metabolic rate and consequently, the foraging rate of most insects. However, temperature experienced during the immature stages of insects affects their adult size (an inverse relationship). Because body size is generally correlated to foraging success, we hypothesized that temperature indirectly influences the foraging efficiency of adult insects through developmental effects. We first investigated the role of parasitoid: host body size ratio on the handling time of Aphidius colemani (Viereck) (Hymenoptera: Braconidae), then tested the prediction that increasing temperature during immature development increases the handling time of adults. As expected, parasitoids took longer to handle large aphids than small aphids. However, large parasitoids did not have shorter handling times than small parasitoids except when attacking large (adult) aphids. Developmental temperature had the predicted effect on parasitoids: Individuals reared at 25°C were smaller than those insects reared at 15°C. Parasitoids reared at 15°C had similar short handling times for both first instar and adult aphids, whereas parasitoids reared at 25°C took longer to handle adult aphids than first instar aphids. The size-mediated effect of temperature through development on parasitoid efficiency was opposite to the more familiar direct effect of temperature through metabolic rate. We conclude that the net effect of temperature on foraging insects will depend on its relative influence on immature and adult stages.     

A proteomic analysis of the aphid Macrosiphum euphorbiae under heat and radiation stress

Temperature and solar radiation can be important sources of abiotic stress for small herbivorous insects living in close association with plants. We examined the effects of daily fluctuations of heat and UV radiation on the proteome and performance of winged and wingless morphs of the aphid Macrosiphum euphorbiae. A daily regime of 4 h of heat stress at 35 °C had more negative effects on the aphid's fitness than a similar period of UV-B stress (11.6 kJ m^?2 per day), and these effects were most pronounced on wingless aphids. Aphid proteomes as detected on 2-D gels revealed ～470 protein spots, with the fluctuating heat stress leading to many more changes than exposure to UV-B. The reduced performance of aphids under heat stress correlated with lower abundance of several enzymes in central pathways of energy metabolism, including the TCA cycle and the respiratory chain. Several exoskeletal proteins were induced or their abundance was increased under high temperature stress, suggesting that cuticle barrier enhancement at molting in response to heat stress is an aphid adaptation to stressful thermal conditions. The proteome of winged aphids was more broadly modulated under stress than that of wingless aphids. Greater homeostatic capabilities as revealed at the proteomic level could explain the higher tolerance of the alate aphid morph to environmental stress and its more stable performance and fitness.     

Machine vision algorithm for whiteflies (Bemisia tabaci Genn.) scouting under greenhouse environment

One of the main problems in greenhouse crop production is the presence of pests. Detection and classification of insects are priorities in integrated pest management (IPM). This document describes a machine vision system able to detect whiteflies (Bemisia tabaci Genn.) in a greenhouse by sensing their presence using hunting traps. The extracted features corresponding to the eccentricity and area of the whiteflies projections allow to establish differences among pests and other insects on both the trap surfaces and dust generated artefacts. Because of whiteflies geometrical characteristics, it was possible to design an efficient (related to manual counting) machine vision algorithm to scout and count units of this pest within a greenhouse environment. These algorithm results show high correlation indexes for both, sticky screens (R² = 0.97) and plant leaf situations (R² = 1.0). The machine vision algorithm reduces the scouting time and the associated human error for IPM‐related activities.     

设施农业景观下破碎化麦田麦蚜及寄生蜂种群的最小适生面积

最小适生面积(MASH)指在一定的时空范围内物种能稳定存在的最小生境面积,它是种群生存力分析(PVA)的重要方法之一.本文采用基于种群数量-面积关系原理的MASH模型模拟了银川平原设施农业景观下破碎化麦田麦蚜、初寄生蜂与重寄生蜂种群发生的MASH.研究表明：密度 面积、增长速度-面积关系模型间存在反比例函数关系,不同物种存在的函数关系明显不同,尤其在不同营养级别的物种间,其函数关系差异更为明显.根据密度-面积关系,利用多项式回归模型计算了麦二叉蚜、麦长管蚜、燕麦蚜茧蜂、烟蚜茧蜂与蚜虫宽缘金小蜂的MASH,其营养级间的MASH差异显著.不同物种的MASH与营养级高低、体型大小、生境质量等有关.初寄生蜂最高的寄生率出现在800～1000 m²,可作为利用初寄生蜂自然控制麦蚜的依据,而不同营养级物种MASH差异可用于害虫的种群控制.     

Influence of “protective” symbionts throughout the different steps of an aphid–parasitoid interaction

Microbial associates are widespread in insects, some conferring a protection to their hosts against natural enemies like parasitoids. These protective symbionts may affect the infection success of the parasitoid by modifying behavioral defenses of their hosts, the development success of the parasitoid by conferring a resistance against it or by altering life-history traits of the emerging parasitoids. Here, we assessed the effects of different protective bacterial symbionts on the entire sequence of the host-parasitoid interaction (i.e., from parasitoid attack to offspring emergence) between the pea aphid, Acyrthosiphon pisum, and its main parasitoid, Aphidius ervi and their impacts on the life-history traits of the emerging parasitoids. To test whether symbiont-mediated phenotypes were general or specific to particular aphid–symbiont associations, we considered several aphid lineages, each harboring a different strain of either Hamiltonella defensa or Regiella insecticola, two protective symbionts commonly found in aphids. We found that symbiont species and strains had a weak effect on the ability of aphids to defend themselves against the parasitic wasps during the attack and a strong effect on aphid resistance against parasitoid development. While parasitism resistance was mainly determined by symbionts, their effects on host defensive behaviors varied largely from one aphid–symbiont association to another. Also, the symbiotic status of the aphid individuals had no impact on the attack rate of the parasitic wasps, the parasitoid emergence rate from parasitized aphids nor the life-history traits of the emerging parasitoids. Overall, no correlations between symbiont effects on the different stages of the host–parasitoid interaction was observed, suggesting no trade-offs or positive associations between symbiont-mediated phenotypes. Our study highlights the need to consider various sequences of the host-parasitoid interaction to better assess the outcomes of protective symbioses and understand the ecological and evolutionary dynamics of insect–symbiont associations.     

The Hohenheimer Box – A new way to rear and release Lariophagus distinguendus to control stored product pest insects

To improve the biological control of stored product pests, the present paper reports on the development of a rearing box for parasitoids of pest insects. The box contains breeding substrate and populations of hosts and parasitoids and is placed in storage sites, where parasitoids are released continuously over several months. The box was developed to rear Lariophagus distinguendus (Förster) (Hymenoptera: Pteromalidae) to control the granary weevil Sitophilus granarius (L.) (Coleoptera: Curculionidae). Due to sanitary reasons, the bean weevil Acanthoscelides obtectus Say (Coleoptera: Bruchidae) was chosen as an alternative host. Rearing experiments revealed that the cowpea Vigna unguiculata unguiculata (L.) Walp. is most suitable as host substrate. For the outlet of the rearing device, a wire gauze mesh size of 0.8–1.0 mm was found suitable to release wasps while holding back the bean weevils. The size of the starting populations of hosts and parasitoids was determined experimentally in a storage building. An amount of 5 ml weevils plus 21–60 adult parasitoids on 2 kg of cowpeas produced an average of 56 and 62 wasps per week respectively, from June to September. Wasps reared in the boxes had the same number of offspring on granary weevils as wasps from regular lab-cultures. This study demonstrates the feasibility of a rearing box for parasitoids of stored product pests that releases large numbers of wasps over several months. We consider our study as a guideline for the development of similar rearing boxes also for other parasitoid-pest systems in stored products protection throughout the world.