Birds in Anthropogenic Landscapes: The Responses of Ecological Groups to Forest Loss in the Brazilian Atlantic Forest

Habitat loss is the dominant threat to biodiversity and ecosystem functioning in terrestrial environments. In this study, we used an a priori classification of bird species based on their dependence on native forest habitats (forest-specialist and habitat generalists) and specific food resources (frugivores and insectivores) to evaluate their responses to forest cover reduction in landscapes in the Brazilian Atlantic Forest. From the patch-landscapes approach, we delimited 40 forest sites, and quantified the percentage of native forest within a 2 km radius around the center of each site (from 6 - 85%). At each site, we sampled birds using the point-count method. We used a null model, a generalized linear model and a four-parameter logistic model to evaluate the relationship between richness and abundance of the bird groups and the native forest amount. A piecewise model was then used to determine the threshold value for bird groups that showed nonlinear responses. The richness and abundance of the bird community as a whole were not affected by changes in forest cover in this region. However, a decrease in forest cover had a negative effect on diversity of forest-specialist, frugivorous and insectivorous birds, and a positive effect on generalist birds. The species richness and abundance of all ecological groups were nonlinearly related to forest reduction and showed similar threshold values, i.e., there were abrupt changes in individuals and species numbers when forest amount was less than approximately 50%. Forest sites within landscapes with forest cover that was less than 50% contained a different bird species composition than more extensively forested sites and had fewer forest-specialist species and higher beta-diversity. Our study demonstrated the pervasive effect of forest reduction on bird communities in one of the most important hotspots for bird conservation and shows that many vulnerable species require extensive forest cover to persist.     

Ants of Three Adjacent Habitats of a Transition Region Between the Cerrado and Caatinga Biomes: The Effects of Heterogeneity and Variation in Canopy Cover

Habitat heterogeneity and complexity associated with variations in climatic conditions are important factors determining the structure of ant communities in different terrestrial ecosystems. The objective of this study was to describe the horizontal and vertical distribution patterns of the ant community associated with three adjacent habitats in a transition area between the Cerrado and Caatinga biomes at the Pandeiros River, state of Minas Gerais, Brazil. We tested the following hypotheses: (1) the richness and composition of ant species and functional group structure changes between different habitats and strata; (2) habitats with higher tree species richness and density support higher ant species richness; and (3) habitats with lower variation in canopy cover support higher ant species richness. Sampling was conducted in three adjacent habitats and at three vertical strata. Ant species richness was significantly different among vertical strata. Ant species composition was different among both habitats and vertical strata and functional group structure was divergent among habitats. Partitioning of the diversity revealed that the diversity for the three components was statistically different from the one expected by the null model; α and β ₂ were higher and β ₁ was lower than the values expected by chance. Tree density and variation in canopy cover negatively affected ant species richness. The occurrence of different species and the changing of functional group structures in different habitats and strata suggest an ecological–evolutionary relationship between ants and their habitats and emphasize the need to implement local conservation strategies in the ecotones between biomes.     

Rethinking the relationship between nestedness and beta diversity: a comment on Baselga (2010)

Baselga [Partitioning the turnover and nestedness components of beta diversity. Global Ecology and Biogeography, 19 , 134–143, 2010] proposed pairwise (β_nes) and multiple‐site (β_NES) beta‐diversity measures to account for the nestedness component of beta diversity. We used empirical, randomly created and idealized matrices to show that both measures are only partially related to nestedness and do not fit certain fundamental requirements for consideration as true nestedness‐resultant dissimilarity measures. Both β_nes and β_NES are influenced by matrix size and fill, and increase or decrease even when nestedness remains constant. Additionally, we demonstrate that β_NES can yield high values even for matrices with no nestedness. We conclude that β_nes and β_NES are not true measures of the nestedness‐resultant dissimilarity between sites. Actually, they quantify how differences in species richness that are not due to species replacement contribute to patterns of beta diversity. Finally, because nestedness is a special case of dissimilarity in species composition due to ordered species loss (or gain), the extent to which differences in species composition is due to nestedness can be measured through an index of nestedness.     

Ignoring ecological demands masks the real effect of urbanization: a case study of ground-dwelling spiders along a rural–urban gradient in a lowland forest in Hungary

We studied ground-dwelling spiders along a rural?Csuburban?Curban forest gradient representing increasing human disturbance using pitfall traps. We tested four known and two novel hypotheses: (1) increasing disturbance hypothesis (species richness is decreasing by disturbance); (2) matrix species hypothesis (the richness of open-habitat species is increasing by disturbance); (3) opportunistic species hypothesis (the richness of generalist species is increasing by disturbance); and (4) habitat specialist hypothesis (the number of the forest specialist species is decreasing by disturbance). As a consequence of urbanization, urban forests become drier and more open; thus, according to the new hypotheses, the number of (5) xerophilous species and (6) light-preferring species are increasing in the urban area. Our result did not support the increasing disturbance hypothesis, as the overall species richness increased from the rural sites to the urban ones. As predicted, the number of both the open-habitat and the generalist species increased towards the urban sites. The number of forest specialist species was higher in the suburban area than in the rural and urban area. Both xerophilous and light-preferring species were the most numerous in the urban area, supporting the xerophilous species and the light-preferring species hypotheses. Canonical correspondence analysis showed that the forest specialist species associated with the rural sites with higher amounts of decaying woods and more herbs or with the suburban sites with higher cover of leaf litter and higher relative humidity. Two generalist species and one open-habitat species were characteristic of urban sites with higher ground surface and air temperature.     

The role of habitat and daily activity patterns in explaining the diversity of mountain Neotropical dung beetle assemblages

The interaction between land use and climate change is expected to strongly affect species distributions along high elevation landscapes. We aimed to test the effect of climatic variables on community metrics among five types of land use in a high elevation landscape. We described dung beetle spatial and temporal taxonomic and functional diversity patterns, and partitioned β‐diversity into turnover and nestedness components. The interaction between land use and daily period of activity mostly drives abundance, functional richness and functional diversity, but not dung beetle species richness. Unlike Neotropical lowlands, species richness and abundance in open environments are similar to those existing in forests. Temperature is an important predictor of abundance and functional divergence. There is a higher spatial component of the taxonomic β‐diversity, which is highly driven by species turnover. The temporal component of the taxonomic β‐diversity was strongly driven by nestedness, where night assemblages are sub‐sets, although not entirely, of diurnal assemblages. For functional diversity, the temporal β‐diversity was much higher than the spatial β‐diversity, but both were similarly represented by functional group turnover and nestedness. The composition of nocturnal and diurnal assemblages is clearly different, even more than the differences observed between habitats. However, taxonomic turnover is the dominant force between sampling sites while nestedness dominates the daily pattern. This means that forest habitats are unlikely to act as shelters for grassland species under a scenario of rising temperature.     

Seasonal beta-diversity of dry grassland vegetation: Divergent peaks of above-ground biomass and species richness

Question

Temperate grasslands are known for their high plant diversity and distinct seasonality. However, their intra-annual community dynamics are still largely overlooked by ecologists. Therefore, we explored the seasonal alpha- and beta-diversity patterns of vascular plants and their relationships to above-ground biomass in a rocky steppe (Festucion valesiacae).

Location

Pavlov Hills, SE Czech Republic.

Methods

For one year, we monitored the plant community of the rocky steppe at monthly intervals in 42 permanent plots of 0.25 m². We examined seasonal changes in above-ground biomass (estimated from the cover and height of living plant parts) and seasonal beta-diversity, which we partitioned into turnover and nestedness components and their quantitative counterparts: balanced changes and abundance gradients.

Results

We identified a pronounced seasonal pattern of above-ground biomass, species richness and composition. Total above-ground biomass was highest in June (summer), with a peak representing only 60% of total annual production (sum of individual species' maxima). However, the observed peak in species richness occurred in March (early spring), with 80% of the total species number recorded throughout the year. Accordingly, nestedness and abundance gradient patterns differed in the spring months, while seasonal turnover and balanced changes in abundance were generally congruent. Annual, short-lived, and perennial species exhibited different seasonal patterns of species richness and biomass production, although a sharp increase in biomass and a peak in species richness in spring were universal across the community.

Conclusions

Seasonal climatic constraints on plant growth are key determinants of primary production dynamics. Plants adapt to these constraints by adjusting their life cycles in different ways. In dry grasslands, the complexity of plant responses to climatic seasonality can result in seasonal beta-diversity patterns with divergent peaks in biomass and species richness.     

Matrix type and landscape attributes modulate avian taxonomic and functional spillover across habitat boundaries in the Brazilian Atlantic Forest

Land use intensification drives biodiversity loss worldwide. In heterogeneous landscape mosaics, both overall forest area and anthropogenic matrix structure induce changes in biological communities in primary habitat remnants. However, community changes via cross‐habitat spillover processes along forest–matrix interfaces remain poorly understood. Moreover, information on how landscape attributes affect spillover processes across habitat boundaries are embryonic. Here, we quantify avian α‐ and β‐diversity (as proxies of spillover rates) across two dominant types of forest–matrix interfaces (forest–pasture and forest–eucalyptus plantation) within the Atlantic Forest biodiversity hotspot in southeast Brazil. We also assess the effects of anthropogenic matrix type and landscape attributes (forest cover, edge density and land‐use diversity) on bird taxonomic and functional β‐diversity across forest–matrix boundaries. Alpha taxonomic richness was higher in forest edges than within both matrix types, but between matrix types, it was higher in pastures than in eucalyptus plantations. Although significantly higher in forests edges than in the adjacent eucalyptus, bird functional richness did not differ between forest edges and adjacent pastures. Community changes (β‐diversity) related to species and functional replacements (turnover component) were higher across forest–pasture boundaries, whereas changes related to species and functional loss (nested component) were higher across forest–eucalyptus boundaries. Forest edges adjacent to eucalyptus had significant higher species and functional replacements than forest edges adjacent to pastures. Forest cover negatively influenced functional β‐diversity across both forest–pasture and forest–eucalyptus interfaces. We show the importance of matrix type and the structure of surrounding landscapes (mainly forest cover) on rates of bird assemblage spillover across forest‐matrix boundaries, which has profound implications to biological fluxes, ecosystem functioning and land‐use management in human‐modified landscapes.     

The effect of species composition dissimilarity on plant–herbivore network structure is not consistent over time

The structural organization of several antagonistic networks has been demonstrated to be largely conserved through time and space even when species beta-diversity is high. This might occur either because species are replaced by others that fulfill similar network roles or because interaction probabilities are given by species relative abundances rather than by their functional traits. Alternatively, if species-specific traits are important drivers of realized interactions, any change in species composition should promote a certain degree of network structural dissimilarity. Here, we used a spatial-temporal system comprising asteraceous plants and flower head herbivores from remnants of Brazilian Cerrado to investigate whether the relationship between spatial beta-diversity of species and network structural dissimilarity changes over time. We measured species beta-diversity using Sørensen's dissimilarity index (β_sor) and its components of species replacement (β_-3) and richness differences (β_rich). Network structural dissimilarity was estimated using three different metrics: connectance, modularity, and web asymmetry. We show that, in general, the effect of species beta-diversity on network structure was time-dependent: While some periods presented a positive relationship between spatial beta-diversity and network structural dissimilarity, others presented no significant relationship. This indicates that functionally similar species may present different turnover rates at distinct periods, and different non-exclusive processes affect plant–herbivore network organization across time.     

Determining the relative roles of species replacement and species richness differences in generating beta‐diversity patterns

Aim To determine the relative contribution of species replacement and species richness differences to the emergence of beta‐diversity patterns. Innovation A novel method that disentangles all compositional differences (β_cc, overall beta diversity) in its two components, species replacement (β_‐3) and species richness differences (β_rich) is proposed. The performance of the method was studied with ternary plots, which allow visualization of the influence of the relative proportions of shared and unique species of two sites over each metric. The method was also tested in different hypothetical gradients and with real datasets. The novel method was compared with a previous proposal based on the partitioning of overall compositional differences (β_sor) in replacement (β_sim) and nestedness (β_nes). The linear response of β_cc contrasts with the curvilinear response of β_sor to linear gradients of dissimilarity. When two sites did not share any species, β_sim was always 1 and β_‐3 only reached 1 when the number of exclusive species of both sites was equal. β_‐3 remained constant along gradients of richness differences with constant replacement, while β_sim decreased. β_rich had a linear response to a linear gradient of richness differences with constant species replacement, whereas β_nes exhibited a hump‐shaped response. Moreover, β_sim > β_nes when clearly almost all species of one site were lost, whereas β_‐3 < β_rich in the same circumstances. Main conclusions The behaviour of the partition of β_cc into β_‐3 and β_rich is consistent with the variation of replacement and richness differences. The partitioning of β_sor into β_sim and β_nes overestimates the replacement component and underestimates richness differences. The novel methodology allows the discrimination of different causes of beta‐diversity patterns along latitudinal, biogeographic or ecological gradients, by estimating correctly the relative contributions of replacement and richness differences.     

Habitat amount drives the functional diversity and nestedness of anuran communities in an Atlantic Forest fragmented landscape

Natural environments disturbed by human activities can suffer from species extinctions, but some can still harbor high taxonomic diversity. However, disturbances may have impacts beyond the species level, if the species lost represent unique functions in the ecosystem. In this study, we evaluated to what extent the amount of habitat can determine the functional diversity and nestedness of amphibian communities in an Atlantic Forest fragmented landscape in Brazil, and if there is a threshold of habitat amount beyond which there is severe loss of functional diversity. As species responses may depend on their habitat type, we performed the analyses for three different sets of species: all species, forest‐dependent species, and generalist species. We also evaluated the relative importance of turnover and nestedness components to total functional dissimilarity among sites. Habitat amount affected functional diversity of frogs, especially for forest‐dependent species where a linear reduction was detected. The functional dissimilarity among sites was mostly explained by the nestedness component. The reduction of functional diversity was mediated by an ordered loss of traits, leading to a functionally nested metacommunity. These sensitive traits were closely related to habits and reproductive modes that depend on rivers and streams. The maintenance of functional diversity of frogs in fragmented landscapes must rely on the conservation of both terrestrial and aquatic environments, as some species and their traits can disappear from remnants of native vegetation lacking some specific habitats (e.g. streams). Abstract in Portuguese is available with online material.     

Measuring fractions of beta diversity and their relationships to nestedness: a theoretical and empirical comparison of novel approaches

Beta diversity and nestedness are central concepts of ecology and biogeography and evaluation of their relationships is in the focus of contemporary ecological and conservation research. Beta diversity patterns are originated from two distinct processes: the replacement (or turnover) of species and the loss (or gain) of species leading to richness differences. Nested distributional patterns are generally thought to have a component deriving from beta diversity which is independent of replacement processes. Quantification of these phenomena is often made by calculating a measure of beta diversity, and the resulting value being subsequently partitioned into a contribution by species replacement plus a fraction shared by beta diversity and nestedness. Three methods have been recently proposed for such partitioning, all of them based on pairwise comparisons of sites. In this paper, the performance of these methods was evaluated on theoretical grounds and tested by a simulation study in which different gradients of dissimilarity, with known degrees of species replacement and species loss, were created. Performance was also tested using empirical data addressing land‐use induced changes in endemic arthropod communities of the Terceira Island in the Azores. We found that the partitioning of β_cc (dissimilarity in terms of the Jaccard index) into two additive fractions, β_‐3 (dissimilarity due to species replacement) plus β_rich (dissimilarity due to richness differences) reflects the species replacement and species loss processes across the simulated gradients in an ecologically and mathematically meaningful way, whilst the other two methods lack mathematical consistency and prove conceptually self‐contradictory. Moreover, the first method identified a selective local extinction process for endemic arthropods, triggered by land‐use changes, while the latter two methods overweighted the replacement component and led to false conclusions. Their basic flaw derives from the fact that the proposed replacement and nestedness components (deemed to account for species loss) are not scaled in the same way as the measure that accounts for the total dissimilarity (Sørensen and Jaccard indices). We therefore recommend the use of β_cc=β_‐3+β_rich, since its components are scaled in the same units and their responses are proportional to the replacement and the gain/loss of species.     

The invasive Yellow Crazy Ant and the decline of forest ant diversity in Indonesian cacao agroforests

Throughout the tropics, agroforests are often the only remaining habitat with a considerable tree cover. Agroforestry systems can support high numbers of species and are therefore frequently heralded as the future for tropical biodiversity conservation. However, anthropogenic habitat modification can facilitate species invasions that may suppress native fauna. We compared the ant fauna of lower canopy trees in natural rainforest sites with that of cacao trees in agroforests in Central Sulawesi, Indonesia in order to assess the effects of agroforestry on occurrence of the Yellow Crazy Ant Anoplolepis gracilipes, a common invasive species in the area, and its effects on overall ant richness. The agroforests differed in the type of shade-tree composition, tree density, canopy cover, and distance to the village. On average, 43% of the species in agroforests also occurred in the lower canopy of nearby primary forest and the number of forest ant species that occurred on cacao trees was not related to agroforestry characteristics. However, A. gracilipes was the most common non-forest ant species, and forest ant richness decreased significantly with the presence of this species. Our results indicate that agroforestry may have promoted the occurrence of A. gracilipes, possibly because tree management in agroforests negatively affects ant species that depend on trees for nesting and foraging, whereas A. gracilipes is a generalist when it comes to nesting sites and food preference. Thus, agroforestry management that includes the thinning of tree stands can facilitate ant invasions, thereby threatening the potential of cultivated land for the conservation of tropical ant diversity.     

Bioindicators of edge effects within Atlantic Forest remnants: Conservation implications in a threatened biodiversity hotspot

Aim

Deforestation of the Atlantic Forest of eastern Paraguay has been recent but extensive, resulting in a fragmented landscape highly influenced by forest edges. We examined edge effects on multiple dimensions of small mammalian diversity.

Location

Forest fragments of eastern Paraguayan Atlantic Forest.

Methods

We trapped small mammal species at different distances from the forest edge (DTE) in reserves and estimated multiple dimensions of diversity per site. Similarity analysis identified species clusters that best described the patterns of diversity across reserves. Multivariate ordination and linear mixed models were used to determine the influence of DTE on various dimensions of small mammal diversity.

Results

There was an increase in richness and abundance along a DTE gradient, and remnants with higher edge:area ratios showed higher richness and abundance, independent of remnant size. Species at edges were generalists, open-habitat species or exotic species (spillover effect). We found higher phylogenetic diversity and functional richness and divergence towards forest edges. Spillover of non-forest and invasive species best explained richness, generalist forest species best explained total abundance, abundance of Hylaeamys megacephalus best explained diversity and evenness metrics and the presence of Marmosa paraguayana best explained various phylogenetic diversity models. None of the models that included megafauna or social factors were shown to be important in explaining patterns as a function of DTE.

Main Conclusions

We found strong support for a spillover effect and mixed support for complementary resource use and enhanced habitat resources associated with ecotones. Generalists characterized edge assemblages but not all generalists were equivalent. Edges showed more phylogenetically and functionally distinct assemblages than the interior of remnants. There was a conservation of functional diversity; however, open-habitat species, habitat generalists and exotic species boosted diversity near forest edges. Mechanisms governing diversity along forest edges are complex; disentangling those mechanisms necessitates the use of multiple dimensions of diversity.     

Beta‐diversity gradients of butterflies along productivity axes

Aim Several lines of evidence suggest that beta diversity, or dissimilarity in species composition, should increase with productivity: (1) the latitudinal species richness gradient is most closely related to productivity and associated latitudinal beta‐diversity relationships have been described, and (2) the scale dependence of the productivity–diversity relationship implies that there should be a positive productivity–beta‐diversity relationship. However, such a pattern has not yet been demonstrated at broad scales. We test if there is a gradient of increasing beta diversity with productivity. Location Canada. Methods Canada was clustered into regions of similar productivity regimes along three remotely sensed productivity axes (minimum and integrated annual productivity, seasonality of productivity) and elevation. The overall (β_j), turnover (β_sim) and nestedness (β_nes) components of beta diversity within each productivity regime were estimated with pairwise dissimilarity metrics and related to cluster productivity with partial linear regression and with spatial autoregression. Tests were performed for all species, productivity breadth‐based subsets (e.g. species occurring in many and a moderate number of productivity regimes), and pre‐ and post‐1970 butterfly records. Beta diversity between adjacent clusters along the productivity gradients was also evaluated. Results Within‐cluster β_j and β_sim increased with productivity and decreased with seasonality. The converse was true for β_nes. All species subsets responded similarly; however, productivity–beta‐diversity relationships were weaker for the post‐1970 temporal subset and strongest for species of moderate breadth. Between‐cluster beta diversity (β_j) and nestedness (β_nes) declined with productivity. Main conclusions As predicted, beta diversity of communities within productivity regimes was observed to increase with productivity. This pattern was driven largely by a gradient of species turnover. Therefore, beta diversity may make an important contribution to the broad‐scale gradient of species richness with productivity. However, this species richness gradient dominates regional beta diversity between productivity regimes, resulting in decreasing between‐productivity dissimilarity with productivity driven by a concurrent decline in nestedness.     

Nestedness-resultant community disassembly process of extinction debt in a highly fragmented semi-natural grassland

There are two major processes of species disassembly after landscape changes: non-random loss of species resulting in nested assemblages and species replacement resulting in spatial species turnover. Although time-lagged responses of species to landscape change have been widely recognized, few studies have empirically evaluated which of these two processes is more closely related to extinction debt (i.e., postponed species extinction following habitat loss). This study aimed to understand the underlying processes of extinction debt by partitioning β-diversity into components of species nestedness and species turnover. We measured grassland species richness at three spatial extents in a highly fragmented semi-natural grassland landscape in Japan. Dissimilarity-based β-diversity was partitioned into two components (i.e., nestedness-resultant dissimilarity [β_sne] and turnover-resultant dissimilarity [β_sim]), which were further analyzed using principal coordinates analyses (PCoA). The relationships between the variability of PCoA axis 1 scores and the current and past habitat proportions were evaluated. A significant positive relationship between current grassland species richness and past (i.e., the 1910s) grassland proportion was found at the largest spatial extent. The first axis of PCoA based on β_sne showed significant correlation with past habitat proportions, whereas the PCoA axis based on β_sim showed no significant correlation with either the current or past habitat proportions. A non-random loss of grassland species represented by nestedness underlay the extinction debt found at the landscape level. There is a chance of predicting the loss of species from the nested ranks of species which likely reflects the gradient of species vulnerability to historical landscape changes.     

Diversity and phenology of hoverflies (Diptera: Syrphidae) in pine forests (Pinus halepensis Miller) of Algeria

Hoverflies are good indicators of ecosystem integrity, especially in drylands. However, the key factors explaining hoverfly diversity in North African forest ecosystems are still not addressed. The current study provides data on the diversity, structure and functional trophic groups (FTG) of the hoverfly community in Aleppo pine forests under a semi-arid climate in northeastern Algeria. Using an entomological net, hoverflies were sampled weekly during 2008–2009. Alpha and beta-diversity of hoverflies and functional trophic group (FTG) were analyzed using several parameters and indices (e.g. species composition, richness, occurrence, diversity, estimations, similarity, etc.). In total, 602 individuals of 21 species were collected with a constant species (Eupeodes corollae) and four common species (Episyrphus balteatus, Chrysotoxum intermedium, Eristalis arbustorum and Eristalis tenax). Most species (17) occurred accidentally or very accidentally in samples. The highest diversity was recorded during spring, corresponding to the flowering season of most understory plant species. Seasonal rarefaction and extrapolation curves indicated that the expected species richness would be higher in autumn and spring compared to summer and winter. The spectrum of FTG ranked predators first with 52.4% of species, followed by saprophagous (42.8%) and then phytophagous (4.8%) species. Hoverfly communities showed high taxonomic richness and alpha-diversity all over the year, with peaks during spring that coincides with flowering period of most plant species of the forest understorey and favourable climatic conditions.     

Mesograzers prefer mostly native seaweeds over the invasive brown seaweed <Emphasis Type="Italic">Sargassum muticum</Emphasis>

The destruction of wetlands due to afforestation areas is a common activity in temperate and subtropical regions in Southern America. The expansion of pine (Pinus elliottii Engelm.) in the Coastal Plain of Southern Brazil is critical and its impacts on aquatic biodiversity are little known. We tested the hypotheses that: (1) pine occurrence diminishes the macrophyte richness and changes the macrophyte composition in ponds; (2) beta-diversity between natural and pine ponds is determined mainly by species nestedness (species loss). Sampling was carried out from 2007 to 2009 in five ponds in pine invasion matrix and five ponds in native grassland matrix. In natural ponds, the total richness was 87 species, followed by 51 species in pine ponds. From the total richness, 42 species were shared between natural and pine ponds. The natural ponds were richer than the pine ponds along the entire study, and the composition of macrophyte species was different between natural and pine ponds. Comparing natural ponds with each other and pine ponds with each other, the species turnover (species replacement) was determinant for beta-diversity, however, when we compared natural and pine ponds, we found that nestedness and species turnover were equivalent for beta-diversity. The increase in the nestedness mechanism indicates that the pine occurrence implies in species loss in Southern Brazil ponds. The change of hydroperiod may be one of the causes for the macrophyte species loss. The removal of pine from areas destined to conservation in Southern Brazil is urgent as well as a proper management of pine plantations in order to minimise its expansions and impacts in the aquatic biodiversity, since 90% of its wetlands have been already lost.     

The conservation value of cacao agroforestry for bird functional diversity in tropical agricultural landscapes

Cacao agroforestry have been considered as biodiversity‐friendly farming practices by maintaining habitats for a high diversity of species in tropical landscapes. However, little information is available to evaluate whether this agrosystem can maintain functional diversity, given that agricultural changes can affect the functional components, but not the taxonomic one (e.g., species richness). Thus, considering functional traits improve the understanding of the agricultural impacts on biodiversity. Here, we measured functional diversity (functional richness‐FD, functional evenness‐FEve, and functional divergence‐Rao) and taxonomic diversity (species richness and Simpson index) to evaluate changes of bird diversity in cacao agroforestry in comparison with nearby mature forests (old‐growth forests) in the Brazilian Atlantic Forest. We used data from two landscapes with constraining areas of mature forest (49% Una and 4.8% Ilhéus) and cacao agroforestry cover (6% and 82%, respectively). To remove any bias of species richness and to evaluate assembly processes (functional overdispersion or clustering), all functional indices were adjusted using null models. Our analyses considered the entire community, as well as separately for forest specialists, habitat generalists, and birds that contribute to seed dispersal (frugivores/granivores) or invertebrate removal (insectivores). Our findings showed that small cacao agroforestry in the forested landscape sustains functional diversity (FD and FEve) as diverse as nearby forests when considering the entire community, forest specialist, and habitat generalists. However, we observed declines for frugivores/granivores and insectivores (FD and Rao). These responses of bird communities differed from those observed by taxonomic diversity, suggesting that even species‐rich communities in agroforestry may capture lower functional diversity. Furthermore, communities in both landscapes showed either functional clustering or neutral processes as the main driver of functional assembly. Functional clustering may indicate that local conditions and resources were changed or lost, while neutral assemblies may reveal high functional redundancy at the landscape scale. In Ilhéus, the neutral assembly predominance suggests an effect of functional homogenization between habitats. Thus, the conservation value of cacao agroforestry to harbor species‐rich communities and ecosystem functions relies on smallholder production with reduced farm management in a forested landscape. Finally, we emphasize that seed dispersers and insectivores should be the priority conservation targets in cacao systems.     

Forest–farm edge effects on communities of ground beetles (Coleoptera: Carabidae) under different landscape structures

In fragmented landscapes, ecological processes may be significantly influenced by edge effects, but few data are available for edge effects across forest–farmland edges. We investigated patterns of species richness, abundance, and species composition in ground beetles across forest–farm edges in two different agro-forest landscapes in Korea. Nine and five sites were selected from Hwaseong, a fragmented landscape, in 2011 and 2012, respectively, while eight sites were selected from Hoengseong, a relatively well-protected landscape, in 2012. Ground beetles were collected by pitfall trapping. Species richness was higher in the surrounding habitat than in the forest interior or edge in both Hwaseong and Hoengseong. However, in Hwaseong, species richness of the forest edge was similar to that of the forest interior, while in Hoengseong forest edge species richness was intermediate between that of the forest interior and surrounding areas. In addition, non-metric multidimensional scaling based on the combined data of both locations showed that the species composition of ground beetles in the forest edge was more similar to that of the forest interior than the surrounding areas, although some open-habitat species occurred at the forest edges. Three characteristic groups (forest specialists, edge-associated species, and open-habitat species) of ground beetle species were detected by indicator value analysis. In our study, ground beetle assemblages differed in the forest edges of two agro-forest landscapes, suggesting that the edge effect on biota can be influenced by landscape structure.     

Extinction thresholds and negative responses of Afrotropical ant-following birds to forest cover loss in oil palm and agroforestry landscapes

Afrotropical ant-following birds are vulnerable to forest loss and disturbance, but critical habitat thresholds regarding their abundance and species richness in human-dominated landscapes, including industrial oil palm plantations, have never been assessed. We measured forest cover through Landsat imagery and recorded species richness and relative abundance of 20 ant-following birds in 48 plots of 1-km², covering three landscapes of Southwest Cameroon: Korup National Park, smallholder agroforestry areas (with farms embedded in forest), and an industrial oil palm plantation. We evaluated differences in encounter frequency and species richness among landscapes, and the presence of critical thresholds through enhanced adaptive regression through hinges. All species were detected in Korup National Park and the agroforestry landscape, which had similar forest cover (>85%). Only nine species were found in the oil palm plantation (forest cover = 10.3 ± 3.3%). At the 1-km² scale, the number of species and bird encounters were comparable in agroforests and the protected area: mean species richness ranged from 12.2 ± 0.6 in the park and 12.2 ± 0.6 in the agroforestry matrix to 1.0 ± 0.4 in the industrial oil palm plantation; whereas encounters decreased from 34.4 ± 3.2 to 26.1 ± 2.9 and 1.3 ± 0.4, respectively. Bird encounters decreased linearly with decreasing forest cover, down to an extinction threshold identified at 24% forest cover. Species richness declined linearly by ca. one species per 7.4% forest cover lost. We identified an extinction threshold at 52% forest cover for the most sensitive species (Criniger chloronotus, Dicrurus atripennis, and Neocossyphus poensis). Our results show that substantial proportions of forests are required to sustain complete ant-following bird assemblages in Afrotropical landscapes and confirm the high sensitivity of this bird guild to deforestation after industrial oil palm development. Securing both forest biodiversity and food production in an Afrotropical production landscape may be best attained through a combination of protected areas and wildlife-friendly agroforestry.