Red tide bloom produced by Lingulodinium polyedrum (Peridiniales, Dinophyceae) in Bahía Culebra, Papagayo Gulf, Costa Rica

This is the first record of the dinoflagellate Lingulodinium polyedrum in a red tide bloom in the North Pacific coast of Costa Rica. The sample was collected on April 2000 at Culebra Bay, Gulf of Papagayo, from a patch of aproximatly 2000 m2, which produced a red discoloration of the water and a peculiar strong odor. This species produces spherical hypnocysts that may remain for decades when dark or anoxic conditions are present; L. polyedrum had been associated with the production of paralyzing toxins such as saxitoxins and yessotoxins. A second smaller patch was observed close Panama beach, into the bay, where we found seven puffer fish (Diodontidae) and two lobsters dead in the sand. It is important to develop a monitoring program to identify seasonal behavior of this species and ameliorate its impact on coastal human communities.     

Bloom of Gymnodinium catenatum in Bahía Santiago and Bahía Manzanillo, Colima, Mexico

Gymnodinium bloom events are of concern, since they produce toxins, which have unfavorable consequences to marine ecosystems, human health and the economy. This report describes the physico-chemical conditions that were present during the algal bloom event on May 2010 in Bahía Manzanillo and Bahía Santiago, Colima, Mexico. For this, seawater nutrient analysis, phytoplankton counts, identification, and toxicity tests were undertaken. Nutrients in seawater were determined using colorimetric techniques, the higher concentrations (8.88 microM DIN, 0.78 microM PO4 and 24.34 microM SiO2) were related with upwelling waters that promoted the algal bloom that began after registering the year lowest sea-surface temperature, favoring the rapid growth of G. catenatum (up to 1.02 x 10(7) cells/L). Phytoplankton counting was carried out using sedimentation chambers and cells enumerated on appropriated area. The bloom persisted in the bays for approximately two weeks and was associated with toxicity (determined with HPLC) in local oysters (1525.8 microg STXeq/100g), and in phytoplankton (10.9 pg STXeq/cells) samples. Strong variations in cell toxicity (1.4 to 10.9pg STXeq/cells), most likely reflected the availability of inorganic nutrients. The toxin profile of the phytoplankton samples consisted of 11 toxins and resembled those recorded for several strains of G. catenatum isolated from other coastal areas of Mexico.     

Do reef fish assemblages benefit from a marine protected area in the north Pacific coast of Costa Rica?

Environmental Biology of Fishes - Reef fish assemblages under fishing pressure generally exhibit a lower fish biomass, abundance, and size structure, which can be counteracted with the creation of...     

Abundance and reproductive patterns of the excavating sponge Cliona vermifera: a threat to Pacific coral reefs?

Cliona vermifera is a common excavating sponge in coral reefs from the East Pacific. Abundance and reproductive patterns of the sponge in a Mexican Pacific coral reef over a 4-year period are herein described. Sponge abundance was estimated along three transects 50 m long which were randomly placed on the reef, and along each one, a piece of coral rubble and a branch of a live coral from the Pocillopora spp. coral colony closest to the transect were collected at random, approximately every 2 m, yielding 25 pieces of each category per transect (and 75 pieces total of each category). A 2-way ANOVA revealed that invasion was significantly higher in living coral colonies (34.8 %) than in rubble (13.7 %). It also indicated that the abundance in both coralline substrates showed a temporal variation without a clear pattern of increase over the years. It was estimated that 60–85 % of sponges in the population reproduced sexually every year. The sponge proved gonochoristic, with a sex ratio strongly departing from parity (1 male: 3 females). Over the 4-year study period, at least two cohorts of oocytes with densities of up to 3.5 oocytes per mm² tissue were observed. Spermatogenesis lasted about a month, but often producing more than a pulse from July to November, coupled with peaks of oocyte maturation. Fertilization occurred internally to produce encapsulated zygotes that were released in one or more spawning events from July to November. In the following months (December to February), which were the periods of lowest temperature (~18.5–20 °C), no gametic activity occurred in the sponges. Because anomalous temperature rises that are detrimental to corals do not appear to negatively affect the reproduction and abundance of C. vermifera, it is likely that the excavating activity of this sponge may be compromising the health of those coral reefs that are recurrently affected by episodes of thermal stress.     

El Niño 1997-1998 impact on the plankton dynamics in the Gulf of Nicoya, Pacific coast of Costa Rica

The impact of the El Ni?o 1997-1998 phenomenom on plankton dynamics was studied during 1997 at the Punta Morales estuary, Gulf of Nicoya, Pacific coast of Costa Rica. The study covered dry season/transition and the rainy season. Phytoplankton (microphytoplankton > 30 microm and nanophytoplankton) were collected at two depths (50 and 10% light incidence) using a 5 L Niskin bottle, and samples taken to determine chlorophyll a. Temperature, salinity, oxygen, and Secchi depth were measured. Horizontal sub-surface zooplankton hauls were conducted with a conic zooplankton net of 0.49 m diameter and 280 microm mesh width, supplied with a flowmeter. Surface sea water temperature average was 29.9 +/- 0.9 degrees C, with a maximum of 31.5 degrees C in April and a minimun of 28 degrees C in March and October. Chlorophyll a concentration (phytoplankton net) averaged 3.1 +/- 1.7 mg/m3, with higher values during the rainy season and lower values during the transition. Nanophytoplankton chlorophyll a concentration averaged 2.5 +/- 1.2 mg/m3, with a maximum during the transition season. For both fractions there were significant differences between transition and rainy seasons, and for nanophytoplankton between dry and transition seasons (p < 0.05). In the last case, differences were explained by temperature. Herbivorous copepods dominated the abundance and biomass of zooplankton, with a biomass maximun of 167.3 in October and a minimun of 7.1 mg DW/m3 in December. These values are higher than those found some years ago in the same zone and those reported for some places in the Caribbean. The El Ni?o 1997-1998 phenomenon in the plankton dynamics appears to have produced a change in the phytoplankton structure. This is the first attempt to evaluate the possible impact of El Ni?o on the plankton dynamics of the Pacific coast of Central America.     

Presence of Cochlodinium catenatum (Gymnodiniales: Gymnodiniaceae) in red tides of Bahía de Banderas, Mexican Pacific

The evolution of an ichthiotoxic algal bloom caused by the dinoflagellate Cochlodinium catenatum was studied from July to December 2000. The abnormal multiplication of this dinoflagellate occurred in the form of a discoloration spreading between a temperature and salinity interval of 25-32 degrees C and 33-35 ups, respectively. The density of C. catenatum reached 10 841 cells ml(-1). The event was observed in large areas of Banderas Bay affecting 13 fish species, whose massive killing was due to suffocation (gill obstruction and excessive mucus production). The human population around the area did not present respiratory affections or skin irritation. The C. catenatum measurements suggest a hologamic and heterothalic reproduction. Their morphological characteristics suggest that C. polykrikoides, C. heterolobatum and C. catenatum are the same species. It is estimated that the species could be a recent introduction in the Mexican Pacific.     

A new estuarine species, Nereis garwoodi (Polychaeta: Nereididae), from Bahía Chetumal, Mexican Caribbean coast

Nereis garwoodi n. sp. is described on the basis of eight syntype specimens (six atokous and two heteronereis) collected in Bahía Chetumal, Mexican Caribbean coast, and the variability in the paragnath numbers in the pharynx is established using 180 specimens; paragnath numbers are I:10(SD = 1.9); II:30 (SD = 2.6); III:41 (SD = 5.2); IV:29 (SD = 3.5), V:1, VI:4, VII-VIII: > 30. Its eyes are big and its longest tentacular cirri reaches setiger 11. A revised key to species of Nereis recorded from the Grand Caribbean Sea is included.     

Mating pattern and population structure in Escazú, Costa Rica: a study using marriage records

A primary focus of historical demographic research is to understand how a population's mating pattern can affect its genetic structure. By using surnames, researchers can reconstruct gene flow into a population as well as within it: the population structure. Indeed, Lasker (1988a) noted that the distribution of surnames reflects the effect of mate choice on a population's genetic structure. Here, we study the mating pattern of a small, clearly established breeding population in Costa Rica (Escazú) during 1800-1839 and 1850-1899. We found that a large proportion of marriages involved individuals who were members of long-standing or core families. Indeed, 27 families provided 56% of all consorts throughout the period under study. When new surnames appeared in the records (presumably as a result of immigration), they were introduced more frequently by males, indicating that more males than females migrated into the community. The core families did not mate preferentially among themselves but appear to have readily accepted the migrants. Indeed,the greatest preponderance of repeated-surname marriages was that expected by chance. However, nonrandom surname repetition is evident when marriages between nonillegitimate consorts are analyzed. That is, the frequency of repeated-pair surname marriages is statistically significant in marriages involving brides and grooms who carried 2 surnames. Interestingly, significant departures from random repetition of surnames occurred during the decade in which the great cholera epidemic affected Costa Rica and during the decade following it. This departure from panmixia supports the notion that mating patterns were altered as a result of the epidemic, a suggestion we made previously when we reported that inbreeding increased in these same decades (Madrigal and Ware 1997).     

Expression systems of human β-defensins: vectors,purification and biological activities

Human beta-defensins are 2–5 kDa, cationic, microbicidal peptides, which represent the first-line host defense against several Gram-negative and Gram-positive bacteria, fungi and viruses. They contain a conserved disulfide-bridge pattern of three pairs of intramolecular cystine bonds. The well-known public health problem related with the growing number of multiresistant bacteria has driven research to look for novel antibiotics, such beta-defensins and a feasible way to produce them. Heterologous expression of beta-defensins could be one way to generate large quantities of beta-defensins for clinical research; however, heterologous expression of beta-defensins has some biochemical problems, such toxicity toward the host cell, peptide degradation by proteolytic cell enzymes, size, folding constrains and low recombinant peptide yields. In this communication, several heterologous systems for producing human beta-defensins are reviewed.     

Airborne pollen in Bahía Blanca,Argentina: seasonal distribution of pollen types

The composition and seasonal distribution of airborne pollen grains in the atmosphere of Bahía Blanca, Argentina, has been studied between June 2001 and December 2003 using the Rotorod sampler (model 40). The results show that the main pollen types during this period were Cupressaceae, Fraxinus, Myrtaceae, Poaceae, Amaranthus/Chenopodiaceae, Pinus, Urticaceae, Ulmus, Olea and Styphnolobium. The highest concentrations occurred from August to December (end of winter and spring), accounting for 80% of the total annual pollen count. The greatest diversity was found in the spring, with the major of pollen coming from short-flowering plant types, such as Populus, Acer, Platanus, Juglans, Tamarix, Ailanthus and Typha. The potential sources of pollen from woody ornamental species are Cupressus sempervirens, Eucalyptus camaldulensis and Fraxinus pennsylvanica. whereas those from herbaceous species are the Chenopodiaceae and Poaceae, which are found within the city and also in the surrounding natural vegetation, and the Urticaceae, which are only present in the city. Marked annual differences were noted during the study period. The increase in 2002 may have been due to the abundant rainfall that occurred prior to the spring season, which would have favored the vegetative stage and flower development of plants. The decrease in pollen concentration in 2003 was mainly due to low rainfall throughout the year.     

Enhanced chemical and biological activities of a newly biosynthesized eugenol glycoconjugate, eugenol α-d-glucopyranoside

Eugenol, the essential component (over 90 %) of clove oil from Eugenia caryophyllata Thunb. (Myrtaceae), is a phenolic compound well known for its versatile pharmacological actions, including analgesic, local anesthetic, anti-inflammatory, antimicrobial, antitumor, and hair-growing effects. However, the application of eugenol is greatly limited mainly because of its unwanted physicochemical properties, such as low solubility, liability to sublimation, and pungent odor. Since glycosylation has been suggested to improve the physicochemical and biological properties of the parental compound, we have previously developed a novel and efficient way to biosynthesize highly purified eugenol α-D-glucopyranoside (α-EG). In light of the widely acknowledged importance of pure eugenol and the potential superiority of the glycosylation, it is crucial to further explore and compare the physicochemical and biological properties of these two phenolic compounds. In this study, we demonstrate that glucosylation is a promising method for modification of phenolic compound, and that α-EG is superior over its parent eugenol, in all of the tested aspects, including physicochemical properties, antioxidation activity, and antimicrobial and antitumor activities. These results strongly suggest that α-EG, as a novel prodrug, may serve as a useful probe and potential therapeutic drug in both fundamental research and clinical application in the coming future.     

The mangrove and others vegetation associations in de Gandoca lagoon, Limón, Costa Rica

Six plant associations were identified at Gandoca Lagoon by photointerpretation and field verification: a) mangroves, b) palm trees swamp, and palm trees with Acrostichum aureum and A. danaefolium, c) mixed palm trees, d) very humid tropical rain forest, and e) tropical beach vegetation. The mangroves cover 12.5 ha surrounding the lagoon and extend 2 km up the Gandoca River. Rhizophora mangle (red mangrove) was the dominant species, with Avicennia germinans (black mangrove), Laguncularia racemosa (white mangrove) and Conocarpus erectus (buttonwood) also present. Moving inland the mangroves grade into a tropical rain forest. Gandoca, the largest and best preserved mangrove of Caribbean Costa Rica, tripled its area from 1976 to 2000. Possible causes include sedimentation and the Limón earthquake, which may have subside the lagoon area.     

Photophysical and biological aspects of α, β-unsaturated ketones: Experimental and in silico approach

In this work, four fluorinated α, β-unsaturated ketones named as 3-(3-bromophenyl)−1-(3-(trifluoromethyl)phenyl)prop-2-en-1-one (1), 3-(4-methoxyphenyl)−1-(3-(trifluoromethyl)phenyl) prop-2-en-1-one (2), 3-(3-bromo-5-chloro-2-hydroxyphenyl)-1-(3-(trifluoromethyl)phenyl) prop-2-en-1-one (3) and 3-(2-hydroxy-5-methylphenyl)-1-(3-(trifluoromethyl)phenyl)prop-2-en-1-one (4) were synthesized by Claisen–Schmidt reaction. The synthesized molecules were then characterized through ultraviolet-visible spectroscopy (UV-Vis), Fourier transform infrared (FTIR), ¹H-NMR, ¹³C-NMR, and mass spectrometry. The antioxidant potential, Urease inhibition, and interaction of compounds 1 – 4 with Salmon sperm DNA were experimentally explored and supported by molecular docking studies. The synthesized compounds strongly interact with SS-DNA through intercalative mode. It was noticed that compound 1 served as potent Urease inhibitor while compound 4 as better antioxidant among synthesized compounds. Moreover, frontier molecular orbitals, nonlinear optical (NLO) properties, natural bond orbitals, molecular electrostatic potential, natural population analysis, and photophysical properties of synthesized compounds were accomplished through density functional theory and time-dependent density functional theory. The band gap of all the compounds have been worked out using Taucs method. In addition to that, a precise comparative account of UV and IR data obtained from theoretical and experimental findings showed good agreement between theoretical and experimental data. The findings of our studies reflected that compounds  1 – 4 possess better NLO properties than Urea standard and the band gap data also reflected their prospective use towards optoelectronic materials. The better NLO behavior of compounds was attributed to the noncentrosymmetric structure of synthesized compounds.     

Lignans of sesame: Purification methods,biological activities and biosynthesis – A review

Lignans are a group of compounds consisting of dimers of phenyl propane units. They are found in diverse forms distributed in a variety of plants. Sesame lignans in particular are obtained from Sesamum indicum, a highly prized oilseed crop cultivated widely in many countries in the east. The plant is the main source of clinically important antioxidant lignans such as sesamin, sesamolin, sesaminol and sesamol. These lignans exhibit antihypertensive, anticancerous and hypocholesterolemic activities as well especially in humans due to which they have become compounds of tremendous research interest in recent times. Sesamin is synthesized from shikimic acid through phenylpropanoid pathway and metabolised into enterolignans which play a pivotal role in protection against several hormone related diseases. In this paper we present an overview of current status of research on sesame lignans with respect to the analytical methods employed, the biological activities and biosynthesis of sesame lignans.     

Discordant coral–symbiont structuring: factors shaping geographical variation of Symbiodinium communities in a facultative zooxanthellate coral genus,Oculina

Understanding the factors that help shape the association between corals and their algal symbionts, zooxanthellae (Symbiodinium), is necessary to better understand the functional diversity and acclimatization potential of the coral host. However, most studies focus on tropical zooxanthellate corals and their obligate algal symbionts, thus limiting our full comprehension of coral–algal symbiont associations. Here, we examine algal associations in a facultative zooxanthellate coral. We survey the Symbiodinium communities associated with Oculina corals in the western North Atlantic and the Mediterranean using one clade-level marker (psbA coding region) and three fine-scale markers (cp23S–rDNA, b7sym15 flanking region, and b2sym17). We ask whether Oculina spp. harbor geographically different Symbiodinium communities across their geographic range and, if so, whether the host’s genetics or habitat differences are correlated with this geographical variation. We found that Oculina corals harbor different Symbiodinium communities across their geographical range. Of the habitat differences (including chlorophyll a concentration and depth), sea surface temperature is better correlated with this geographical variation than the host’s genetics, a pattern most evident in the Mediterranean. Our results suggest that although facultative zooxanthellate corals may be less dependent on their algal partners compared to obligate zooxanthellate corals, the Symbiodinium communities that they harbor may nevertheless reflect acclimatization to environmental variation among habitats.

     

Diversity of ammonia-oxidizing archaea and bacteria in the sediments of a hypernutrified subtropical estuary: Bahía del Tóbari, Mexico

Nitrification within estuarine sediments plays an important role in the nitrogen cycle, both at the global scale and in individual estuaries. Although bacteria were once thought to be solely responsible for catalyzing the first and rate-limiting step of this process, several recent studies have suggested that mesophilic Crenarchaeota are capable of performing ammonia oxidation. Here we examine the diversity (richness and community composition) of ammonia-oxidizing archaea (AOA) and bacteria (AOB) within sediments of Bahía del Tóbari, a hypernutrified estuary receiving substantial amounts of ammonium in agricultural runoff. Using PCR primers designed to specifically target the archaeal ammonia monooxygenase alpha-subunit (amoA) gene, we found AOA to be present at five sampling sites within this estuary and at two sampling time points (January and October 2004). In contrast, the bacterial amoA gene was PCR amplifiable from only 40% of samples. Bacterial amoA libraries were dominated by a few widely distributed Nitrosomonas-like sequence types, whereas AOA diversity showed significant variation in both richness and community composition. AOA communities nevertheless exhibited consistent spatial structuring, with two distinct end member assemblages recovered from the interior and the mouths of the estuary and a mixed assemblage from an intermediate site. These findings represent the first detailed examination of archaeal amoA diversity in estuarine sediments and demonstrate that diverse communities of Crenarchaeota capable of ammonia oxidation are present within estuaries, where they may be actively involved in nitrification.     

Spatial ecology and conservation of two sloth species in a cacao landscape in limón,Costa Rica

The spatial ecology of sloths was studied in an agricultural landscape in Limón Province, Costa Rica. Two sloth species, the three-toed sloth (Bradypus variegatus) and the two-toed sloth (Choloepus hoffmanni), actively used and traveled through a cacao agroforest and its contiguous living fence rows and riparian forests. This agroecosystem was embedded in an agricultural landscape dominated by banana and pineapple plantations and pastures with dispersed trees. The two-toed sloth (C. hoffmanni) was found in 101 tree species and used 34 for food; the three-toed sloth (B. variegatus) was found in 71 tree species and used 15 for food. Choice of preferred species differed between the two sloth species. Trees commonly used by sloths for food and/or refuge in the cacao agroforest included Erythrina poeppigiana, Cecropia obtusifolia, Leucaena leucocephala; in the living fence rows, Cordia alliodora, Erythrina poeppigiana, Ocotea sinuata and Trophis racemosa; in the riparian forests, Coussapoa villosa, Cecropia obtusifolia, Hura crepitans, Pterocarpus officinalis and Spondias mombin; and in the pastures with dispersed trees, Cordia alliodora, Coussapoa villosa, Erythrina poeppigiana, Ocotea sinuata and Hura crepitans. This study demonstrates the importance of the cacao agroforest as well as arboreal elements in other land uses in providing resources for sloth conservation in a larger agricultural landscape.     

ABO and Rh blood groups and serum proteins in an Amerindian population of Matambú, Costa Rica

Genetic structure of the population of Matambú, Costa Rica, was investigated using 6 genetic markers: ABO and Rh blood groups, and 4 serum proteins: albumin, ceruloplasmin, haptoglobin and transferrin. All the individuals were Rh+ and the I degrees allele had a high frequency (0.89). There are 4 polymorphic alleles in ceruloplasmin, including a possible new variant (3.8%). Transferrin Dchi had a remarkably high frequency (0.11). These results indicate that this group is of Amerindian origin although there are Caucasic and Negroid genes present. The genetic constitution of Matambú differs from that of the other Amerindian groups such as the Guaymí, from Chibcha stock, which supports the hypothesis of a Mesoamerican origin.