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1.
Survival rates have rarely been estimated for pinniped populations due to the constraints of obtaining unbiased sample data. In this paper, we present an approach for estimating survival probabilities from individual recognition data in the form of photographic documentation of pelage patterns. This method was applied to estimate adult (age 2+) survival for harbour seals in the Moray Firth, NE Scotland. An astronomical telescope was used to obtain digital images of individual seals, and high-quality images were used to document the annual presence or absence of individuals at a single haul-out site over a 4-year period. A total of 95 females, 10 males and 57 individuals of unknown sex were photographically documented during the study period. Survival and recapture probabilities were estimated using Jolly–Seber mark–recapture models in a Bayesian statistical framework. Computer-intensive Markov Chain Monte Carlo methods were used to estimate the probability distributions for the survival and recapture probabilities, conveying the full extent of the uncertainty resulting from unavoidably sparse observational data. The deviance information criterion was used to identify a best-fitting model that accounted for variation in the probability of capture between sexes, with constant survival. The model estimated adult survival as 0.98 (95% probability interval of 0.94–1.00) using our photo-identification data alone, and 0.97 (0.92–0.99) with the use of an informative prior distribution based on previously published estimates of harbour seal survival. This paper represents the first survival estimate for harbour seals in the UK, and the first survival estimate using photo-identification data in any species of pinniped.  相似文献   

2.
  总被引:4,自引:1,他引:3  
Out of 52 chub Leuciscus cephalus tagged with internal radio‐transmitters, 46 migrated to spawning grounds in the River Spree, Germany. All chub started their first spawning migration on 21–22 May in both years of study, 1995 and 1996. They arrived at three different spawning grounds within a day and left after 1 to 6 days to return to their original sites. On 17 and 18 June 1995 and 1996 chub started their second spawning migration with the same pattern as the first. About 60% of all migrating chub moved between 1 and 13 km upstream to the nearest spawning ground. Some exceptions were observed: a few chub did not use the nearest spawning ground, some chub used different spawning grounds at first and second spawning or moved downstream to a spawning ground. Spawning grounds were characterized by 0·4 m s−1 current velocity, shallow depth (0·1–0·8 m) and a stony bottom, where most eggs adhered.  相似文献   

3.
    
The present study provides the first detailed early embryonic development of the Shalyni barb, Pethia shalynius (Yazdani & Talukdar, 1975), a vulnerable cyprinid fish occurring in streams and lentic waters of Meghalaya, northeast India. Induced spawning by synthetic hormone injection in May 2019 was conducted to a pair of mature female and male P. shalynius under controlled conditions in a well-aerated aquarium. Fertilized eggs were spherical, 0.75–0.80 mm (approx.) in diameter, transparent, unpigmented and non-adhesive. A total of 22 developmental stages could be categorized under seven broad periods, viz. the zygote, cleavage, blastula, gastrula, segmentation, pharyngula and hatchling. The first cleavage occurred at 15 min post fertilization (mpf), followed by blastulation at 01:23 hr post-fertilization (hpf), gastrulation at 04:20 hpf, initial somite formation at 07:00 hpf, and pharyngula period at 19:20 hpf, respectively. Embryos hatched between 26–27 hpf and the newly-hatched larvae ranged 2.2–2.5 mm in total length. For naturally-declining populations of this vulnerable fish species, inferences drawn from the present study will help provide a baseline data for its conservation and management, and aid the research fields of developmental biology, biotechnology, molecular biology as well as taxonomy of this species.  相似文献   

4.
The objectives of this study were to determine (1) the seasonal timing and diel activity patterns of lacustrine brook charr when migrating to a lake outlet for spawning, and (2) the homing of reproducing individuals. In 1995, 745 individuals were captured while migrating to the spawning ground compared to 1148 in 1996. In both years, the sex ratio was not significantly different from 1:1 but females were significantly longer than males. The spawning migrations lasted about 48d and were more nocturnal (between 20:00 and 8:00h) than diurnal. The migration to the spawning ground began when water temperature decreased to 13°C and peaked when water temperature decreased from 11°C to 7°C. Peaks in migration activity were always preceded by a sudden decrease followed by an increase in temperature. The spawning migration lasted until the third week of October, when water temperature varied between 3°C and 8°C. Males, especially larger ones, arrived on the spawning ground before females in both years. The length of males migrating to the spawning ground decreased during the spawning season while the females' length showed no pattern. Only 9.7% of the 745 fin-clipped individuals from 1995 returned to the lake outlet to spawn in 1996. The results of this study indicate that lacustrine brook charr show similarities to other anadromous and lake-spawning salmonid populations when migrating to spawning grounds.  相似文献   

5.
6.
  总被引:1,自引:0,他引:1  
Adult grayling Thymallus thymallus migrated from 230 to 4980 m up the Aisne stream, Belgium, to spawn between 18 and 29 March, under decreasing floods, increasing temperature and low turbidity. Males ( n =4) arrived on spawning grounds several days earlier than females ( n =2), stayed there longer (10–19 v. 2–3 days), and occupied a single ground each, whereas females moved between several places. After spawning, all grayling homed precisely into the pool-riffle sequences where they were tagged in late February, and remained here until late June. These observations indicate that resident grayling are far less mobile than autumn-spawning salmonids, and that the environmental factors triggering spawning migrations resemble more closely those of spring-spawning cyprinids than of other salmonids. The implications of these restricted mobility patterns are discussed within the scope of population structure, and impact of river management.  相似文献   

7.
    
Cowen L  Schwarz CJ 《Biometrics》2006,62(3):699-705
Tag loss in mark-recapture experiments is a violation of one of the Jolly-Seber model assumptions. It causes bias in parameter estimates and has only been dealt with in an ad hoc manner. We develop methodology to estimate tag retention and abundance in double-tagging mark-recapture experiments. We apply this methodology to walleyes (Stizostedion vitreum) in Mille Lacs, Minnesota.  相似文献   

8.
    
K. Müller  E. Berg 《Hydrobiologia》1982,96(2):161-168
Quantitative estimations of spring migrating fish have been made in the mouth part of the small coastal river Ängerån which flows into the northern Bothnian Sea (63°35N, 19°50E). In 1981 nearly 3 000 fish were counted ascending to the spawning grounds in the lower reaches of the Ängerån. These species, such as pike, perch, roach and ide, adapted to the oligohaline environment in the Bothnian Sea for most of the year, migrate to spawn in the coastal stream. The reason for these migrations can be interpreted to indicate that the Ängerån offers more favourable water temperature conditions at spawning time compared with the Bothnian Sea, which is ice-covered up to the beginning of May. The most important result of the investigation in the Ängerån is that these fish species, in the same way as the salmonids, return to theirhome-stream every year as adults.Andreasson & Petersson (1982) listed 69 species of fish in the oligohaline Gulf of Bothnia (Table 1) where salinity varies from 2 near the mouth of the River Torneäly to 6 in the vicinity of the Åland Islands (Fig. 1). The fish fauna comprises freshwater and marine species, fish migrating between brackish and freshwater rivers and streams, and recently introduced non-endogenous species.Andreasson & Petersson (1982) designated only five species as anadromous migrators, whereas our studies show that 11 species migrate from the sea to spawn in the Ängerån, a small river discharging into the northern Bothnian Sea (Fig. 2). Earlier reports on these migrations have been given by Berglund (1978) and Johnson (1978, 1982) and for another small stream in the area by Berg (1982).The present paper describes the annual spring migrations of pike, perch, roach and ide between the northern Bothnian Sea and the Ängerån, for the year 1981.  相似文献   

9.
    
Members of the genus Cyprinion (Cypriniformes: Cyprinidae) are found in the Indus River basin west to the Arabian Peninsula and the Tigris-Euphrates River drainages (Persian Gulf basin). The taxonomic status of Cyprinion including Cyprinion muscatense is poorly understood when compared to other cyprinid genera. C. muscatense has been considered as a member of the Cyprinion watsoni-microphthalmum group and a valid species endemic to the Arabian Peninsula. Here, we redescribe C. muscatense based on an integrative morphological and molecular approach and freshly sampled material from several localities in the Oman Mountains ecoregion. The results showed that C. muscatense is distinguished from the other Cyprinion species in the Arabian Peninsula by having a short, thin, and slightly serrated last unbranched dorsal fin ray; the lower number of circumpeduncular scales; lateral line scales; and also scales between the lateral line and the dorsal-fin origin. Subterminal mouth, presence of one pair of small barbels at the mouth corner, 3–4 unbranched and 9½–10½ dorsal-fin branched rays, 12–14 pectoral-fin rays, 7–8 pelvic-fin rays, 2–3 unbranched and 6½–7½ branched anal-fin rays, and 37–40 lateral line scales are other morphological characteristics of C. muscatense. C. muscatense is also well distinguished by molecular characters among its congeners. The first molecular phylogenetic analysis of the genus, covering all currently recognized Cyprinion species except for C. watsoni, is also presented. C. muscatense is resolved as the sister species to another endemic fish of the Arabian Peninsula Cyprinion mhalense, with a Kimura-2-Parameter model distance of 5.3%.  相似文献   

10.
    
Bonner SJ  Schwarz CJ 《Biometrics》2006,62(1):142-149
Recent developments in the Cormack-Jolly-Seber (CJS) model for analyzing capture-recapture data have focused on allowing the capture and survival rates to vary between individuals. Several methods have been developed in which capture and survival are functions of auxiliary variables that may be discrete, constant over time, or apply to the population as a whole, but the problem has not been solved for continuous covariates that vary with both time and individual. This article proposes a new method to handle such covariates by modeling changes over time via a diffusion process and using logistic functions to link the variable to the CJS capture and survival rates. Bayesian methods are used to estimate the model parameters. The method is applied to study the effect of body mass on the survival of the North American meadow vole, Microtus pennsylvanicus.  相似文献   

11.
  总被引:2,自引:0,他引:2  
Royle JA 《Biometrics》2008,64(2):364-370
Summary .   In population and evolutionary biology, there exists considerable interest in individual heterogeneity in parameters of demographic models for open populations. However, flexible and practical solutions to the development of such models have proven to be elusive. In this article, I provide a state-space formulation of open population capture–recapture models with individual effects. The state-space formulation provides a generic and flexible framework for modeling and inference in models with individual effects, and it yields a practical means of estimation in these complex problems via contemporary methods of Markov chain Monte Carlo. A straightforward implementation can be achieved in the software package WinBUGS . I provide an analysis of a simple model with constant parameter detection and survival probability parameters. A second example is based on data from a 7-year study of European dippers, in which a model with year and individual effects is fitted.  相似文献   

12.
13.
  总被引:1,自引:0,他引:1  
Link WA  Barker RJ 《Biometrics》2005,61(1):46-54
We present a hierarchical extension of the Cormack-Jolly-Seber (CJS) model for open population capture-recapture data. In addition to recaptures of marked animals, we model first captures of animals and losses on capture. The parameter set includes capture probabilities, survival rates, and birth rates. The survival rates and birth rates are treated as a random sample from a bivariate distribution, thus the model explicitly incorporates correlation in these demographic rates. A key feature of the model is that the likelihood function, which includes a CJS model factor, is expressed entirely in terms of identifiable parameters; losses on capture can be factored out of the model. Since the computational complexity of classical likelihood methods is prohibitive, we use Markov chain Monte Carlo in a Bayesian analysis. We describe an efficient candidate-generation scheme for Metropolis-Hastings sampling of CJS models and extensions. The procedure is illustrated using mark-recapture data for the moth Gonodontis bidentata.  相似文献   

14.
1. Different behavioural responses of planktonic animals to their main predators, fish, have been reported from shallow lakes. In north temperate lakes, large‐bodied zooplankton may seek refuge from predation among macrophytes, whereas in subtropical lakes, avoidance of macrophytes has been observed. The prevalent behaviour probably depends on the characteristics of the fish community, which in Mediterranean lakes is typically dispersed in both the open water zone and in the littoral, as in temperate lakes, and is dominated by small size classes, as in subtropical lakes. 2. We performed ‘habitat choice’ experiments to test the response of Daphnia magna to predation cues at both the horizontal and vertical level by mimicking a ‘shallow littoral’ zone with plants and a ‘deeper pelagic’ zone with sediments. 3. Initial separate response experiments showed that natural plants, artificial plants and predation cues all repelled D. magna in the absence of other stimuli, while sediments alone did not trigger any significant response by D. magna. 4. The habitat choice experiments showed that, in the presence of predation cues and absence of plants, Daphnia moved towards areas with sediment. In the presence of both plants and sediments, Daphnia moved away from the plants towards the sediments under both shallow and deep water treatment conditions. 5. Based on these results, we suggest that Daphnia in Mediterranean shallow lakes avoid submerged macrophytes and instead prefer to hide near the sediment when exposed to predation risk, as also observed in subtropical shallow lakes. This pattern is not likely to change with water level alterations, a common feature of lakes in the region, even if the effectiveness of the refuge may be reduced.  相似文献   

15.
    
The annual migration pattern of round sardinella Sardinella aurita up and down the north-western African coast between 12° N (Senegal) and 22° N (western Sahara) was shown to be associated with spawning activity and a distinct seasonality in fish condition, based on monthly sampling from commercial catches (2000–2003). Some S. aurita were found to spawn throughout the entire year, but a peak in spawning existed during the summer (June to September). The spawning cycle is apparent from seasonality in maturity stages, but is also demonstrated by the increase in gonad mass and fat content of the fish in springtime, the period preceding spawning. During the months after spawning, although feeding is maintained, the physical condition of the fish collapses, and fat content rapidly declines.  相似文献   

16.
    
Dupuis JA  Schwarz CJ 《Biometrics》2007,63(4):1015-1022
This article considers a Bayesian approach to the multistate extension of the Jolly-Seber model commonly used to estimate population abundance in capture-recapture studies. It extends the work of George and Robert (1992, Biometrika79, 677-683), which dealt with the Bayesian estimation of a closed population with only a single state for all animals. A super-population is introduced to model new entrants in the population. Bayesian estimates of abundance are obtained by implementing a Gibbs sampling algorithm based on data augmentation of the missing data in the capture histories when the state of the animal is unknown. Moreover, a partitioning of the missing data is adopted to ensure the convergence of the Gibbs sampling algorithm even in the presence of impossible transitions between some states. Lastly, we apply our methodology to a population of fish to estimate abundance and movement.  相似文献   

17.
    
Scanning electron microscopy (SEM) has been widely used to describe interspecific differences in egg quality of teleost freshwater fish, but potential intraspecific differences are poorly studied. Eggs of many rheophilic cyprinids are covered with adhesive structures such as attaching villi facilitating egg attachment at substrates of spawning grounds with high currents. Recent findings indicate that the egg quality of the rheophilic cyprinid common nase (Chondrostoma nasus L.), a target species of conservation, differs in the adhesiveness between spawning populations, potentially explaining differences in recruitment success. In this study, a SEM image-based standardized protocol was established to assess egg surface quality of Chondrostoma nasus eggs. Multivariate statistics detected significant differences of egg surface properties among individual females and among three different populations. These differences were mainly attributed to length variability and merging of adhesive villi as well as to coating and filament-like connections of these structures. The findings of this study highlight the need for further investigations to better understand the relationship of egg surface properties, egg stickiness and hatching success to understand the recruitment ecology and performance of early life stages in freshwater fish.  相似文献   

18.
Koed  A.  Balleby  K.  Mejlhede  P. 《Hydrobiologia》2002,483(1-3):175-184
The behaviour of radio-tagged adult pikeperch (Stizostedion lucioperca (L.)) from two areas in the Danish River Gudenaa were recorded prior to, and during the spawning period. Eight of 13 tagged fish in the lower reaches of the river were located throughout the whole study. Five of these fish moved upstream to various sites in the river prior to spawning, which occurred from late April to June. The three remaining fish moved to the fjord. These movements were interpreted as a spawning migration, and it is suggested that the lower reaches of the River Gudenaa constitute an over-wintering area for pikeperch, which use different spawning areas. Ten pikeperch caught just downstream of an impassable hydropower plant were radio-tagged and translocated upstream of the dam to a reservoir. Within a week, half of the fish moved to a lake situated more than 30 km upstream the reservoir. This behaviour is hypothesised to be a homing response. The study reveals that the pikeperch is a highly mobile species with a complicated migration pattern, even in relatively small river systems.  相似文献   

19.
20.
    
Genetic variation of brown trout inhabiting six connected lakes (Krokavatn, Skavatn, Kollsvatn, Litlosvatn, Kvennsjøen and Øvre Krokavatn) of the Hardangervidda mountain plateau was analysed by 11 microsatellites covering a period of 24–35 years. Temporal changes were found and are deemed to be mostly related to stocking in the headwater lakes Krokavatn and Skavatn. A pronounced change was evident in one population (Kollsvatn) and was the result of downstream migration of stocked fish from these headwater lakes. This indirect stocking accounted for up to 50% in the STRUCTURE analysis of Kollsvatn fish and was less pronounced in the other downstream populations of Litlosvatn ( c. 28%), Kvennsjøen ( c. 17%) and Øvre Krokavatn ( c. 13%). Since significant downstream migration of stocked fish affecting native populations occurs, nature management efforts must respond accordingly.  相似文献   

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