Enzyme-linked immunosorbent assays for detecting antibodies to Shiga-like toxin I,Shiga-like toxin II,andEscherichia coli O157:H7 lipopolysaccharide in human serum

Shiga-like toxin-producingEscherichia coli O157:H7 are important causes of bloody diarrhea and hemolytic uremic syndrome. To facilitate the epidemiologic study of these organisms, we developed enzyme-linked immunosorbent assays (ELISAs) for antibodies to Shiga-like toxin I (SLT I), Shiga-like toxin II (SLT II), andE. coli O157 lipopolysaccharide (LPS). We tested serum samples from 83 patients in two outbreaks ofE. coli O157:H7 diarrhea and from 66 well persons. Forty-three patients (52%) had at least one serum sample positive for anti-O157 LPS antibodies; among 26 culture-confirmed patients, 24 (92%) had at least one positive serum sample. Two (3%) of 66 control sera had positive anti-O157 LPS titers. ELISA results for SLT I and II were compared with those of HeLa cell cytotoxicity neutralization assays on both patient and control sera. Neutralization assays detected anti-SLT I antibodies in at least one serum sample from each of 17 (20%) patients and 7 (10.6%) controls, while 16 (19%) patients and 7 controls had positive titers by anti-SLT I ELISA. Although all serum samples, including control sera, showed nonspecific neutralization of SLT II, no antibody titers to SLT II were detected by either neutralization or ELISA. These results indicate that ELISAs for SLT I and SLT II antibodies are comparable to HeLa cell cytotoxicity neutralization assays. Both the ELISAs and neutralization assays are insensitive in detecting infected patients. However, the ELISA for antibodies toE. coli O157 LPS is both sensitive and specific, and may be more useful than assays for antitoxic antibodies in detecting persons withE. coli O157:H7 infection.     

Adherence Patterns and DNA Probe Types of Escherichia coli Isolated from Diarrheal Patients in China

One hundred and seventy-two strains of Escherichia coli isolated from diarrheal patients in Beijing, P. R. China, were analyzed for plasmid DNA profile, HEp-2 cell adherence ability and reactivity to 10 previously described DNA probes. They had not been recognized as pathogenic E. coli in China. Of the 110 strains tested, 76 (69%) contained one or multiple large plasmids. Of the 71 strains with the large plasmids 64 could adhere to HEp-2 cells. Of the 172 strains, 102 (59.3%) were hybridized with at least one of the 10 probes. Of those, seven strains hybridized with enteroaggregative E. coli (EAggEC) probe. Their serotypes were O128 (two strains), O6 (one strain), and O111 (one strain). Three strains were untypable. Six and three strains were hybridized with enteropathogenic E. coli (EPEC) attaching and effacing genes (eae) or EPEC adherence factor (EAF) probe, respectively. Two non-O157: H7 strains hybridized with enterohemorrhagic E. coli (EHEC) probe. Seventy-two strains (41.9%) hybridized with shiga-like toxin 2 or 1 (SLT2 or SLT1) probes. Among the SLT1 or SLT2 probe-positive strains, 54 hybridized with invasive (INV) plasmid probe developed for identification of enteroinvasive E. coli (EIEC) and Shigella species. The INV and SLT probe-positive strains might represent a new variety of verotoxin-producing E. coli (VTEC).     

Comparative feeding strategies of yellowfin tuna around St Helena and adjacent seamounts of the South Atlantic Ocean

Yellowfin tuna are the mainstay of the traditional tuna fisheries in St Helena waters, but there is limited knowledge of their ecology and feeding behaviour in the area. In this study yellowfin tuna stomach contents were used to assess spatio-temporal changes in feeding strategy and consider the role of tuna in the local ecosystem. Comparisons of the feeding spectra of yellowfin tuna between inshore regions of St Helena and oceanic seamounts demonstrated that in both areas the species was largely piscivorous. In inshore waters yellowfin consumed more neritic fauna, including significant numbers of crab megalopa, whereas around seamounts the diet included a greater diversity of epi- and mesopelagic fish and squids. The most important fish prey species in inshore waters was the St Helena butterflyfish Chaetodon sanctahelenae, and around seamounts was the pufferfish Lagocephalus lagocephalus. Results indicate that the diet spectrum of yellowfin tuna in St Helena waters is relatively similar to those of conspecifics living in waters with relatively low productivity, with strategies indicative of food-poor ecosystems. The availability of coastal fauna may make areas around islands and seamounts more attractive for feeding aggregations of yellowfin tuna, compared to the open ocean. The relatively unselective feeding of yellowfin tuna means that stomachs can provide valuable data on the species diversity, particularly in remote areas with limited opportunities for dedicated research expeditions.     

Phylogenetic relationships between tuna species of the genus Thunnus (Scombridae: Teleostei): Inconsistent implications from morphology,nuclear and mitochondrial genomes

In order to infer phylogenetic relationships between tuna species of the genus Thunnus, partial sequences of the mitochondrial cytochrome b and ATPase genes were determined in all eight species. Supplemental restriction analysis on the nuclear rRNA gene was also carried out. Pacific northern bluefin tuna (Thunnus thynnus orientalis) was found to have mtDNA distinct from that of the Atlantic subspecies (T. t. thynnus) but very similar to that from the species albacore (T. alaluga). In contrast, no differentiation in nuclear genome was observed between the Atlantic and Pacific northern bluefin tunas. The Atlantic northern bluefin and southern bluefin tunas possessed mtDNA sequences very similar to species of yellowfin tuna group and not so similar to albacore and bigeye tunas which were morphologically assigned to the bluefin tuna group. The molecular data indicate that (1) mtDNA from albacore has been incorporated into the Pacific population of northern bluefin tuna and has extensively displaced the original mtDNA, and (2) albacore is the earliest offshoot, followed by bigeye tuna in this genus, which is inconsistent with the phylogenetic relationships between these tuna species inferred from morphology. Correspondence to: S. Chow     

Further evidence of spawning of bluefin tuna (Thunnus thynnus L., 1758) and the tuna species (Auxis rochei Ris., 1810, Euthynnus alletteratus Raf., 1810) in the eastern Mediterranean Sea: preliminary results of TUNALEV larval survey in 2004

A tuna larval survey (TUNALEV) in the Northern Levantine Basin (Cilician Basin) was conducted onboard a trawler from 5 to 18 June 2004. To determine the spatial distribution and abundance of tuna larvae, Bongo 60 and Bongo 90 nets were used. Ichtyoplankton samples from 104 stations were taken. In total, 121 bluefin tuna (Thunnus thynnus), 94 bullet tuna (Auxis rochei) and 22 Atlantic black skipjack (Euthynnus alletteratus) larvae were collected. In comparison with the other tuna larvae, the concentration of bluefin tuna larvae was highest in the Bay of Mersin. The collected larvae in this area were composed mainly of 5–9 mm size specimens.     

Food consumption of yellowfin tuna,Thunnus albacares, in Sri Lankan waters

Synopsis A total of 4181 stomachs of yellowfin tuna,Thunnus albacares (22–164 cm FL), mainly caught by gillnets in the period from July 1984 to June 1986 were analyzed. Food consumption of yellowfin tuna in nature was determined using the values of the average stomach content, incorporating laboratory measurements of gastric evacuation rates in a feeding model. The diet of yellowfin tuna around Sri Lanka comprised a variety of macro zooplanktonic and nektonic organisms. Juveniles < 39 cm FL, are planktivores. Tuna > 40 cm FL gradually increase their consumption of fishes with increasing size. Among fish speciesAuxis sp. are the most important. The daily food consumption of juvenile yellowfin tuna (22–59 cm FL) range from 1.8 g to 136.2 g, increasing to about 284.7 g to 551.9 g for the medium size tuna (60–99 cm FL). The adult tuna (100–>130 em FL) consume around 513 g to 538.8 g of prey per day. Daily ration estimates increase from 2.1% to 5.5% of body weight with increasing size up to 70 cm FL, beyond which it decreases. The predatory pressure of yellowfin tuna on commercially important fishes and other species is discussed.     

Expression of tuna growth hormone cDNA in Escherichia coli

Summary In order to produce tuna (Thunnus thynnus) growth hormone (GH), expression plasmid (pUES13S) carrying tuna GH cDNA was constructed using a vector (pKK223-3), in which the replication origin was replaced with that of pUC19. The expression of the tuna GH cDNA was greatly affected by the distance between a Shine-Dalgarno (SD) sequence and the initiation codon (ATG) and was most efficient when the distance was adjusted to 13 base pairs (bp). The amount of tuna GH produced by Escherichia coli JM109 with pUES13S was more than 12.5% of the total cytosolic proteins and the product was immunologically identified to be tuna GH (mol. wt. 21 000) by Western blot analysis using tuna GH specific immunoglobulin G (IgG). Another plasmid (pUES13S-2) containing tandemly polymerized tuna GH cDNA was constructed, to improve the productivity of tuna GH. When E. coli JM109 carrying pUES13S-2 was incubated at 40°C, the amount of tuna GH produced reached about 20% of the total cytosolic proteins.     

Environmental preferences of bigeye tuna, <Emphasis Type="Italic">Thunnus obesus</Emphasis>, in the Indian Ocean: an application to a longline fishery

A survey of the fishing grounds for bigeye tuna, Thunnus obesus, in the Indian Ocean was carried out for a better understanding of the environmental preferences of bigeye tuna in a longline fishery. Catch rates of bigeye tuna were analyzed with respect to the ranges of depth, temperature, salinity, chlorophyll-a, and dissolved oxygen. The optimum capture depth, water temperature, and dissolved oxygen range of bigeye tuna were identified as 240.0 m to 279.9 m, 12.0°C to 13.9°C, and 2.00 mg·L⁻¹ to 2.99 mg·L⁻¹, respectively, in the study area of Indian Ocean. Neither salinity nor chlorophyll-a had a detectable effect on the vertical distribution of the adult bigeye tuna. The dissolved oxygen is the principal factor limiting the vertical distribution of bigeye tuna.     

Microsatellite DNA markers for population‐genetic studies of Atlantic bluefin tuna (Thunnus thynnus thynnus) and other species of genus Thunnus

Twenty‐five microsatellites from Atlantic bluefin tuna (Thunnus thynnus thynnus) were characterized. All 25 microsatellites were polymorphic; the number of alleles among up to 56 individuals surveyed ranged from two to 23. Atlantic bluefin tuna are highly exploited and major questions remain as to stock structure and abundance in the eastern and western North Atlantic. The microsatellites will be useful in testing stock‐structure hypotheses and in generating estimates of effective population size. The polymerase chain reaction primer sets developed also amplified identifiable alleles in three other species of genus Thunnus: T. albacares (yellowfin tuna), T. alalunga (albacore tuna) and T. obesus (bigeye tuna).     

The catalytic domain of a bacterial lytic transglycosylase defines a novel class of lysozymes

The 70-kDa soluble lytic transglycosylase (SLT70) from Escherichia coli is a bacterial exo-muramidase that cleaves the cell wall peptidoglycan, producing 1,6-anhydro-muropeptides. The X-ray structure of SLT70 showed that one of its domains is structurally related to lysozyme, although there is no obvious similarity in amino acid sequence. To relate discrete structural features to differences in reaction mechanism and substrate/product specificity, we compared the threedimensional structure of the catalytic domain of SLT70 with the structures of three typical representatives of the lysozyme superfamily: chicken-type hen egg-white lysozyme, goosetype swan egg-white lysozyme, and phage-type lysozyme from bacteriophage T4. We find a particularly close relationship between the catalytic domain of SLT70 and goose-type lysozyme, with not only a significant similarity in overall structure, but even a weak homology in amino acid sequence. This finding supports the notion that the goose-type lysozyme takes up a central position in the lysozyme superfamily and that it is structurally closest to the lysozyme ancestors. The saccharide-binding groove is the most conserved part in the four structures, but only two residues are absolutely preserved: the “catalytic” glutamic acid and a structurally required glycine. The “catalytic” aspartate is absent in SLT70, a difference that can be related to a different mechanism of cleavage of the β-1,4-glycosidic bond. The unique composition of amino acids at the catalytic site, and the observation of a number of differences in the arrangements of secondary structure elements, define the catalytic domain of SLT70 as a novel class of lysozymes. Its fold is expected to be exemplary for other bacterial and bacteriophage muramidases with lytic transglycosylase activity. © 1995 Wiley-Liss, Inc.     

Longtail tuna,Thunnus tonggol (Bleeker, 1851): a global review of population dynamics,ecology, fisheries,and considerations for future conservation and management

Longtail tuna (Thunnus tonggol) is a neritic species that supports commercial, artisanal and recreational fisheries throughout the Indo-Pacific region. Historically receiving little attention by commercial fisheries, the global annual catch of longtail tuna has steadily risen from around 30,000 t in the early 1980s to exceeding 200,000 t since 2004, reaching a peak of 291,264 t in 2007, and was 281,613 t in 2017. Catches of longtail tuna in the Indian Ocean now exceed catches of principal commercial target species, such as albacore and bigeye tunas. A sequence of stock assessments undertaken throughout the species’ range since the late 1980s persistently indicated that at least three of the four stocks defined in this paper are likely to have been, and most likely are currently, subject to overfishing and overfished as a result of excess fishing effort on this relatively slow-growing and long-lived tuna species. As the spawning biomass of principal tuna target species continue to decline in both the Indian and western and central Pacific Oceans, the increasing catches of longtail tuna, other neritic tunas, and seerfishes is worrisome. Few conservation and management measures (CMMs) are currently in place specifically for longtail tuna, although in recent years some coastal States, Regional Fishery Bodies, and tuna Regional Fisheries Management Organisations have begun to develop initiatives to improve the catch and biological data quality for longtail tuna and sympatric species of neritic tunas and tuna-like species. This paper provides a global review of biological, ecological and fishery information to provide researchers, fishery managers and policy makers with the most current information from which to begin to guide future stock assessment and the development of CMMs for longtail tuna.

     

Rapid temperature compensation of volitional swimming speeds and lethal temperatures in tropical tunas (Scombridae)

Synopsis Observations on continuously swimming tunas were used to determine effects of temperature upon volitional locomotory activity and to determine upper and lower lethal temperatures. Experimental subjects were 10 skipjack tuna, Katsuwonus pelamis, 9 kawakawa, Euthynnus affinis, and 3 yellowfin tuna, Thunnus albacares.Our results: lower and upper lethal temperatures for the euthynnids (K. pelamis and E. affinis) were 15° and 33° C, respectively. Swimming speed for the euthynnids did not decrease with temperature within most of the zone of thermal tolerance; we observed either temperature independence or increases in speed as the temperature decreased. Yellowfin tuna swam slower as the water temperature decreased, but swimming speed changes lagged behind the water temperature changes. This effect was most certainly due to the large thermal inertia that is a property of tunas. The lag between swim speed and water temperature was eliminated by utilizing an estimate of red muscle temperature, rather than water temperature, as a covariate. Yellowfin tuna swim speed was best correlated with red muscle temperature rather than ambient water or brain temperatures.     

Extended jurisdiction and the management of Pacific highly migratory species

Abstract

The Pacific region is the most important producer of tropical tuna in the world. Three subregions account for the production: Pacific Latin America, the Pacific Islands region, and Southeast Asia. Prior to the UN Third Conference on the Law of the Sea, the Tuna Fisheries in the subregions were the preserve of developed distant water fishing nations. The situation has now been entirely reversed, with coastal state jurisdiction and control being realized in all three subregions. It is argued that American opposition to coastal state jurisdiction over tuna resources acted as a goad to the coastal states in Pacific Latin America and the Pacific Islands region in their quest for greater control over tuna resources. There are prospects of cooperation developing among the three Pacific subregional tuna producers. It is argued further that American action may have inadvertently accelerated the progress toward cooperation.     

Aluminum-sensitive mutants of Saccharomyces cerevisiae

We are developing budding yeast, Saccharomyces cerevisiae, as a genetic system for the study of tolerance to the trivalent aluminum cation (Al³⁺). We have isolated eight mutants that are more sensitive to Al³⁺ than the wild type. Each mutant represented a different complementation group. A number of the mutants were pleiotropic, and showed defects in other stress responses, changes in tolerance to other metal cations, or abnormal morphology. Two mutants also showed increased dependence on supplemental Mg²⁺ and Ca²⁺. One mutant with a relatively specific sensitivity to Al³⁺ was chosen for molecular complementation. Normal Al³⁺ tolerance was restored by expression of the MAP kinase gene SLT2. Strains carrying deletions of the SLT2 gene, or of the gene for the corresponding MAP kinase–kinase SLK1, showed sensitivity to Al³⁺. These results indicate that the SLT2 MAP kinase signal transduction pathway is required for yeast to sense and respond to Al³⁺ stress. Received: 17 April 1996 / Accepted: 21 October 1996     

Near reef abundance and on–offshore distribution of tuna larvae around Minicoy Island in Lakshadweep Sea,India

ABSTRACT

Near reef abundance and coast–offshore distribution of tuna larvae around Minicoy Island were studied based on three cruises carried out on board FORV Sagar Sampada during 2014–15. The samples were collected by oblique tows using bongo twin nets (300 micron) for three seasons (Fall inter-monsoon (FIM), Spring inter-monsoon (SIM) and Summer monsoon (SM)) in six on–offshore stations ranging from 1 to 20?km off-shore of the Minicoy. Results indicated that the tuna larvae aggregate in the near reef waters and total tuna larvae abundance (all the species combined) shows a decreasing trend towards off-shore. Tuna larvae are found to be more abundant during SM and FIM. Comparison of the species-wise variation in tuna larvae for one season (SM) indicated that the larvae of Euthunnus affinis (32.5%) dominated among the tuna species, followed by Auxis spp. (31.6%), Thunnus spp. (3.9%) and Katsuwonus pelamis (2.7%). A pattern of highest larvae abundance in the near reef areas was observed except for Thunnus larvae. GAM indicated that mean seawater temperature and mean seawater salinity are the major environmental factors that significantly influence the larvae abundance, particularly for Thunnus followed by Katsuwonus pelamis, E. affinis and Auxis spp. The study confirms that the environmental parameters show high variation between stations and among transects as a result of the complex oceanographic characteristics around the islands. Further studies with better understanding of the larvae dynamics and their association with the environmental parameters including physical processes are essential to elucidate these relationships more clearly.     

The role of discounting and dynamics in determining the economic efficiency of time-area closures for managing fishery bycatch

Time-area closures are commonly used to manage fisheries bycatch and involve temporarily closing an area of the ocean to particular fishing gears. We examine conditions in which implementing a time-area closure would increase the economic value of fisheries, focusing on a case study application in the Gulf of Mexico. Pelagic longline fishermen catch the highly valued Atlantic bluefin tuna (Thunnus thynnus, Scombridae) on their Gulf of Mexico spawning grounds while fishing for Atlantic yellowfin tuna (Thunnus albacares). We analyze a multispecies, multifishery bioeconomic model that includes information on migratory patterns from electronic tagged bluefin tuna. We use dynamic optimization to identify management strategies that would maximize the net present value of tuna fisheries, allowing for discounting of future benefits and costs relative to the present. If past fishing mortality rates continue in Atlantic bluefin tuna fisheries, implementing a time-area closure in the Gulf of Mexico incurs economic costs. However, the net present value of the fisheries is increased by implementing a time-area closure as part of a broader commitment to rebuild the heavily depleted bluefin population, provided the discount rate and the costs of such a closure in forgone fishing opportunities are not too large. The increase in economic value offered by a time-area closure is small relative to the overall economic value of rebuilding itself and it may be economically optimal only to implement a closure once sufficient rebuilding has already taken place.     

Size related variability in the summer diet of the blackfin tuna (Thunnus atlanticus Lesson, 1831) from Tobago,the Lesser Antilles

Blackfin tuna (Thunnus atlanticus) is a small epipelagic oceanic species known only from the western Atlantic. In Tobago, the Lesser Antilles, blackfin tuna is caught by the artisanal fishery. The diet of this species was examined during the summer of 2004 for fish landed at the Charlotteville fish market in Tobago. T. atlanticus ranged from 32 to 91 cm FL (0.7–12.4 kg). Overall numerical abundance of prey items comprised fish (48%), crustaceans (46%) and cephalopods (6%). Prey species included small pelagics such as anchovies (ranked as most important prey overall), juveniles of larger pelagics such as jacks, juveniles of fish found in coral reef communities as adults, e.g. squirrelfishes, and some mesopelagic species. The importance of major diet categories differed significantly with predator size, with fishes becoming more important and crustaceans less important with increasing size of the blackfin tuna. This study has improved our scant knowledge of the blackfin tuna diet in the Lesser Antilles.     

Estimation of overall fishing intensity of tuna longline fishery-yellowfin tuna (Thunnus albacares) fishery in the indian ocean as a case study

According to the FAO catch statistics, the total catch of yellowfin tuna (Thunnus albacares) from the Indian Ocean is characterised by decline in the longline fishery and rapid increase in the surface fishery. In the present communication, an attempt has been made to estimate the overall effective fishing intensity of longline fishery for yellowfin tuna by the Japanese longliners during the years 1973–1975. The results on areas and seasons of effective effort expended are presented, along with estimates of tuna availability, effective fishing intensity and the relative gear efficiency.