稻瘟病菌群体的分子遗传学研究III.——广东省2001年度稻瘟病菌群体的遗传结构分析以及两个假说的提出

利用随机扩增多态性DNA技术(randomamplifiedpolymorphicDNA,RAPD)对广东省2001年度稻瘟病菌群体的遗传结构进行了分析。以相似性系数为0.70阈值时,可将采集于广东省三大生态稻作区、早稻和晚稻生长季节的96个菌株划分为12个遗传宗谱;其中宗谱8和9的菌株数各占总数的25%和18.8%,为优势宗谱。从稻作区来看,宗谱3和8为各个稻作区的共同宗谱;而宗谱1和2,7和11,以及9、10和12则依次是粤北、粤中和粤南稻作区的特异性宗谱。从生长季节来看,来源于早、晚季的菌株完全分属于宗谱图的上、下两个半区,彼此之间不存在共同的宗谱;而且两个优势宗谱都集中于晚季供试亚群体。结合前两次实验的结果,作者提出了如下两个假说来解释广东省稻瘟病菌群体所表现的遗传特性:一个地区或生长季节的病原菌群体,其优势宗谱所占的比例越高,该地区或生长季节病害发生就越严重;在长期的水稻栽培历史中,稻瘟病菌群体可能逐步地形成了早季宗谱(小种)和晚季宗谱(小种)的遗传分化。如何进一步验证上述两个假说是值得我们进一步探讨的重要课题。     

Morphogenesis of blood cell lineages in channel catfish

The morphogenesis of blood cell lineages in channel catfish Ictalurus punctatus , from head and trunk kidney and spleen imprints as well as from blood smears of bled and control fish, showed that early maturation stages resembled those in higher vertebrates. The erythroid lineage consisted of the proerythroblast, erythroblasts (basophilic, polychromatic, orthochromic), young erythrocyte and erythrocyte. The rare bilobed erythrocyte seemed to be a cell in apoptosis while old erythrocytes and erythroplastids represented remnants of this process. Maturation stages of neutrophils and basophils encompassed the granuloblast, young progranulocyte, progranulocyte and metagranulocyte. The basophilic lineage was regularly present in kidneys, rare in spleen and absent from blood. It contained large Sudan Black and PAS-negative, water soluble granules and small PAS-positive ones. Lymphocytes with azurophilic granulation occured regularly in kidneys and spleen. Monoblasts and promonocytes in kidneys preceded monocytes. A phagocytic lineage devouring apoptotic blood cell remnants was present in kidneys and spleen. Its youngest identified stage (promacrophage) resembled more a granuloid cell without granules than a monocytoid one. The larger, young macrophages contained a few to several ingestions and the very large mature macrophages were loaded with them. The latter two stages corresponded to cells in melano-macrophage centres (macrophage aggregates). Precursor stages of the thrombocyte were not identified.     

Evidence suggesting preadaptation to domestication throughout the small Felidae

One obstacle in the development of a coherent theoretical framework for the process of animal domestication is the rarity of domestication events in human history. It is unclear whether: (1) many species are suitable for domestication, the limiting factor being the requirement of people for new domestic animals; or (2) very few species are preadapted for domestication. Comparisons between 16 species and subspecies of small cats (Felidae) kept in zoos indicated that affiliative behaviour towards people, an important preadaptation to domestication, is widely, if patchily, distributed throughout this taxon, and is not concentrated in species closely related to the domestic cat, Felis silvestris catus . The highest proportion of individuals showing affiliative behaviour was found in the ocelot lineage, which is estimated to have diverged from the rest of the Felidae between 5 and 13 Mya. The domestication of F. silvestris alone among felids is therefore likely to have been the result of a specific set of human cultural events and requirements in the Egyptian New Kingdom, rather than the consequence of a unique tendency to tame-ness in this subspecies.© 2002 The Linnean Society of London, Biological Journal of the Linnean Society , 75 , 2002, 361–366.     

On the notion of fitness,or: The selfish ancestor

We introduce a concept of fitness of a lineage as the number of descendents weighted by their degree of relatedness with the ancestor of the lineage and propose this as a scheme for analyzing altruistic behavior.     

The neural crest,A multifaceted structure of the vertebrates

In this review, several features of the cells originating from the lateral borders of the primitive neural anlagen, the neural crest (NC) are considered. Among them, their multipotentiality, which together with their migratory properties, leads them to colonize the developing body and to participate in the development of many tissues and organs. The in vitro analysis of the developmental capacities of single NC cells (NCC) showed that they present several analogies with the hematopoietic cells whose differentiation involves the activity of stem cells endowed with different arrays of developmental potentialities. The permanence of such NC stem cells in the adult organism raises the problem of their role at that stage of life. The NC has appeared during evolution in the vertebrate phylum and is absent in their Protocordates ancestors. The major role of the NCC in the development of the vertebrate head points to a critical role for this structure in the remarkable diversification and radiation of this group of animals. Birth Defects Research (Part C) 102:187–209, 2014. © 2014 Wiley Periodicals, Inc.     

Isolation and characterization of chloroplast microsatellite markers in four mangrove species,Aegiceras corniculatum,Avicennia marina,Acanthus ilicifolius and Lumnitzera racemosa

One, three, seven, and six of polymorphic chloroplast microsatellite (cpSSR) markers were developed from four mangrove species, Acanthus ilicifolius, Aegiceras corniculatum, Avicennia marina, and Lumnitzera racemosa, respectively. Characterization of 229, 509, 369, and 216 individuals of A. ilicifolius, A. corniculatum, A. marina, and L. racemosa, collected from different natural mangrove populations (A. ilicifolius, 6; A. corniculatum, 14; A. marina, 10; L. racemosa, 6) in the southern coastline of China showed that these loci provide cpSSR markers with polymorphisms ranging from two to four alleles per locus and gene diversity between 0.005 and 0.675. Combining the polymorphic cpSSR loci of each species, 3, 5, 11, and 4 of cpSSR haplotypes were separately detected in populations of A. ilicifolius, A. corniculatum, A. marina, and L. racemosa in the southern coastline of China. These cpSSR markers will be useful for analyzing the maternal lineage distributions and population genetic structures of these four species.     

THE INTERFACE BETWEEN PHYLOGENETICS AND POPULATION GENETICS: INVESTIGATING GENE TREES,SPECIES TREES,AND POPULATION DYNAMICS IN THE PHYLLOPHAGA FRATERNA SPECIES GROUP

This study uses traditional and contemporary phylogenetic and population genetic analyses to assess the causes of discordance (i.e., lineage sorting and introgression) among mitochondrial and nuclear gene trees for a clade of eastern North American scarab beetles (fraterna species group, genus Phyllophaga). I estimated gene trees using individual and combined analysis of one mitochondrial and two nuclear loci in MrBayes , and inferred a species tree using a hierarchical coalescent approach based on all loci in the program Best . Because hybridization violates the assumptions of Best , I tested for introgression by comparing species monophyly between the mitochondrial and nuclear gene trees based on the prediction that cytoplasmic genomes introgress more readily than nuclear genomes. Haplotype exclusivity was identified using Bayesian tests of monophyly and the genealogical sorting index. I used the results of the phylogenetic analyses and monophyly tests to develop an explicit hypothesis of introgression that could be tested in the program IMa. Results from these analyses provided evidence for introgression across clades within the fraterna group. The tiered analytical approach used in this study demonstrated how the use of multiple methods can identify when assumptions are violated and methods are prone to yield misleading results.     

The Soldiers in Societies: Defense,Regulation, and Evolution

The presence of reproductively altruistic castes is one of the primary traits of the eusocial societies. Adaptation and regulation of the sterile caste, to a certain extent, drives the evolution of eusociality. Depending on adaptive functions of the first evolved sterile caste, eusocial societies can be categorized into the worker-first and soldier-first lineages, respectively. The former is marked by a worker caste as the first evolved altruistic caste, whose primary function is housekeeping, and the latter is highlighted by a sterile soldier caste as the first evolved altruistic caste, whose task is predominantly colony defense. The apparent functional differences between these two fundamentally important castes suggest worker-first and soldier-first eusociality are potentially driven by a suite of distinctively different factors. Current studies of eusocial evolution have been focused largely on the worker-first Hymenoptera, whereas understanding of soldier-first lineages including termites, eusocial aphids, gall-dwelling thrips, and snapping shrimp, is greatly lacking. In this review, we summarize the current state of knowledge on biology, morphology, adaptive functions, and caste regulation of the soldier caste. In addition, we discuss the biological, ecological and genetic factors that might contribute to the evolution of distinct caste systems within eusocial lineages.     

心脏的起源和细胞谱系

心脏是器官发生过程中最早形成的结构之一.心脏的原基分布图和心脏细胞谱系是心脏起源和形态发生研究的主要方面.总结了近几年来以鸡和小鼠为模型,在心脏发生和心脏前体细胞定位方面的研究情况.     

Expression of myosin heavy chain isoforms in myogenic clones obtained from developing quail breast muscle

Summary Monoclonal antibodies specifically recognizing cardiac and extraocular muscle myosin heavy chains of the quail (Coturnix coturnix japonica) were used to determine the patterns of expression of these isoforms in clonal cultures of embryonic quail myoblasts. Myoblasts prepared from 9 day embryonic pectoralis are virtually homogeneous in their ability to form clones expressing both cardiac and extraocular isoforms. The majority of myoblasts obtained from day 5 embryos also formed clones which co-express the cardiac and extraocular isoforms, but a small percentage of the clones expressed only cardiac isoforms.     

Characterization and cellular localization by monoclonal antibodies of the 60 kDa mannose specific lectin of human promyelocytic cells,HL60

Myelomonocytic lineage cells express anM _r 60 000 mannose specific lectin, MR60 (Pimpaneauet al. (1991),Carbohydr Res 213: 95–108). Under non-reducing conditions, this protein migrates as a 120 000 protein. MR60 does not contain anyN-glycan moiety cleavable by the action ofN-glycanase. MR60 induces a sugar selective aggregation of beads coated with glycosylated albumin: beads bearing -d-mannosyl residues are aggregated while beads bearing -d-glucosyl residues are not. A monoclonal antibody Lec101B, specific for MR60, recognizes a singleM _r 60 000 protein by Western blotting. This monoclonal antibody does not label the cell surface of cells expressing MR60, but decorates intracellular vesicles upon permeabilization of these cells.     

Gynandromorph analysis of the thoracic disc primordia inDrosophila melanogaster

Summary Cell lineage relationships observable inDrosophila gynandromorphs have been used to locate the primordia of the individual thoracic disc relative to each other in the embryo. Three observations indicate that the borders of the individual disc primordia lie very close to each other, separated by few if any non-disc cells.First, the frequency of mosaicism within each disc indicates large primordia, of similar magnitude to the distances between the centres of adjacent primordia.Second, very few XX/XO-borders cut between adjacent discs without also cutting into one or the other disc.Third, sturt distances between points on adjacent discs are often much smaller than distances measured within individual discs. The proximity of disc primordia suggests that the individual discs might share common precursor cells in the early embryo.     

Gene and species trees reveal mitochondrial and nuclear discordance in the Drosophila cardini group (Diptera: Drosophilidae)

Abstract. The Drosophila cardini group includes 15 species, which are subdivided into the D. cardini and D. dunni subgroups. Although many phylogenetic hypotheses have been proposed for this group during the last five decades (based on patterns of reproductive isolation, morphology of male genitalia, chromosomal inversions, isozyme variation, or molecular sequence data), these are mostly discordant with each other. We aimed to clarify some of the evolutionary patterns related to the origin of this incongruence, while also attempting to provide a better-supported phylogenetic hypothesis for the D. cardini subgroup. For this purpose, sequences from three mitochondrial and three nuclear loci were gathered for at least eight species, and both individual gene trees and joint species tree estimates were evaluated. Although there was concordance among gene trees within each of the nuclear and mitochondrial sets, considerable incongruence was revealed in the comparisons between these two data sets. The branching position of D. neocardini was the main source of incongruence, and species trees reconstructed using different approaches with and without this species were particularly incongruent. In addition to providing a better approximation of the evolutionary history of the D. cardini group, this study suggests that incomplete lineage sorting or introgression may be biasing previous species tree estimates. More generally, the results also suggest that the use of supermatrix methods can lead to an overestimation of support for the inferred relationships, and highlight the potential effects of different taxon sampling strategies in phylogenetic reconstruction.     

高精度时空转录组揭示小鼠早期胚胎三胚层细胞谱系发生过程

从受精卵发育成具有不同细胞类型个体的过程中,细胞命运受到多个层次的调控。在哺乳动物的早期胚胎发育过程中,原肠运动是外、中、内三个胚层的建立过程,为后续的器官发生和形态建成提供了发育蓝图。然而目前对于三胚层命运建立的分子机制认识并不清晰。该文通过对小鼠早期胚胎的时空转录组分析,从分子层面揭示了外、中、内三胚层谱系发生的整个过程。     

Developmental patterns of the hermaphroditic gonad in dicyemid mesozoans (Phylum Dicyemida)

Abstract. The development of the hermaphroditic gonad, the infusorigen, was studied in fixed specimens of 16 species belonging to four genera ( Conocyema, Dicyema, Dicyemennea , and Pseudicyema ) of dicyemid mesozoans. In addition, the literature on the cell lineages of infusorigens of eight other species was reviewed. After an agamete (axoblast) undergoes an unequal first division, excluding a small cell (the paranucleus), the resulting large cell divides to form the infusorigen. Five infursorigen cell lineage patterns can be identified: type I, both the first oogonium and the first spermatogonium are produced at the third division; type II, the first spermatogonium is produced at the second division and the first oogonium is produced at the third division; type III, the first spermatogonium is produced at the second division and the first oogonium is produced at the fourth division; type IV, the first oogonium is produced at the second division and the first spermatogonium is produced at the third division; and type V, the first oogonium is produced at the second division and the first spermatogonium is produced at the fourth division. Later development is similar in members of all genera. Mature infusorigens are similarly organized in all species examined. Sizes of agametes and infusorigen axial cells, the number of infusorigens, and the type of reproductive strategy were not correlated with infusorigen developmental patterns or cell lineage patterns.     

Morphological character evolution in hepialid moths (Lepidoptera: Hepialidae) from New Zealand

Mapping morphological characters on a molecular-based phytogeny enabled examination of character evolution and an historical perspective into evolutionary processes, both of which are important aspects of systematic research and comparative biology. In this study, 63 morphological characters from hepialid moths in New Zealand were mapped on a phylogenetic tree reconstructed from mitochondrial DNA COI & II sequence data. Morphological characters hypothesized to be synapomorphies for the New Zealand 'Oxycanus' lineages and 'Oxycanus' lineage s.s. were confirmed to be homologous when mapped on the COI & II phytogeny. The direction of character state transformation was determined for five characters, with members of the Aenetus and Aoraia lineages exhibiting hypothesized ancestral states. Male genitalic characters were less homoplasious than other character partitions and covaried significandy with phytogeny.