Patterns and drivers of fish extirpations in rivers of the American Southwest and Southeast

Effective conservation of freshwater biodiversity requires spatially explicit investigations of how dams and hydroclimatic alterations among climate regions may interact to drive species to extinction. We investigated how dams and hydroclimatic alterations interact with species ecological and life history traits to influence past extirpation probabilities of native freshwater fishes in the Upper and Lower Colorado River (CR), Alabama‐Coosa‐Tallapoosa (ACT), and Apalachicola‐Chattahoochee‐Flint (ACF) basins. Using long‐term discharge data for continuously gaged streams and rivers, we quantified streamflow anomalies (i.e., departure “expected” streamflow) at the sub‐basin scale over the past half‐century. Next, we related extirpation probabilities of native fishes in both regions to streamflow anomalies, river basin characteristics, species traits, and non‐native species richness using binomial logistic regression. Sub‐basin extirpations in the Southwest (n = 95 Upper CR, n = 130 Lower CR) were highest in lowland mainstem rivers impacted by large dams and in desert springs. Dampened flow seasonality, increased longevity (i.e., delayed reproduction), and decreased fish egg sizes (i.e., lower parental care) were related to elevated fish extirpation probability in the Southwest. Sub‐basin extirpations in the Southeast (ACT n = 46, ACF n = 22) were most prevalent in upland rivers, with flow dependency, greater age and length at maturity, isolation by dams, and greater distance upstream. Our results confirm that dams are an overriding driver of native fish species losses, irrespective of basin‐wide differences in native or non‐native species richness. Dams and hydrologic alterations interact with species traits to influence community disassembly, and very high extirpation risks in the Southeast are due to interactions between high dam density and species restricted ranges. Given global surges in dam building and retrofitting, increased extirpation risks should be expected unless management strategies that balance flow regulation with ecological outcomes are widely implemented.     

BIODIVERSITY RESEARCH: Geographical linkages between threats and imperilment in freshwater fish in the Mediterranean Basin

Aim The level of imperilment of mediterranean freshwater fish is among the highest recorded for any group of organisms evaluated to date. Here, we describe the geographical patterns in the incidence of threats affecting mediterranean freshwater fish and test whether the effects of specific threats are spatially related to the degree of imperilment of fish faunas. Location The Mediterranean Basin Biome. Methods From the IUCN Red List, we recorded the six main threats to 232 endemic freshwater fish species. We used data on fish distributions from IUCN to characterize the spatial patterns in the incidence of threats (as percentage of species affected) through multivariate statistics. We studied the relationships between threat incidence and two estimators of imperilment (proportion of species threatened and an index of extinction risk) at two spatial scales (10 × 10 km and basins) using partial least squares regressions (PLSR) that incorporated the effects of species richness and mean range size. Results The main axis of variation in the incidence of threats to freshwater fish split areas mainly affected by invasive species from those areas where species are threatened by pollution and agriculture. Wherever invasive species and water extraction were predominant threats, fish assemblages consistently tended to be more imperilled. Main conclusions As far as we know, this is the first large‐scale analysis on the spatial relationships between the incidence of threats and level of imperilment of any taxonomic group. Our results highlight the primary role of invasive species and water extraction as drivers of native fish declines in the Mediterranean Basin. Large‐scale patterns described here should be generated by local‐scale impacts of both threats on fish biodiversity, widely reported in Mediterranean areas. Because all the species under concern are endemic, control of invasive species and reducing overexploitation of freshwater resources should be conservation priorities for mediterranean freshwater systems.     

Community Structure of Wetland Birds During Spring Migration Through the Rainwater Basin

Abstract: Staging areas and migratory stopovers of wetland birds have the potential to function as geographic bottlenecks; entire populations within a flyway may be affected by the quality and quantity of available wetland habitat at stopover sites. Although approximately 90% of playa wetlands in the Rainwater Basin (RWB) region of south-central Nebraska, USA, have been destroyed, the area still provides essential stopover habitat for >10 million waterfowl each spring. We evaluated community patterns and species associations to assess importance of assembly rules in structuring wetland bird communities during migration and to better facilitate multispecies conservation and management strategies. We surveyed 36–40 playas twice weekly in the RWB and observed approximately 2.6 million individual migratory wetland birds representing 72 species during 3 spring migrations 2002–2004. We evaluated spatial and temporal species co-occurrence patterns of geese, dabbling ducks, diving ducks, and shorebirds using null model analysis. Goose species co-occurrence scores did not differ from random in any year of the study, suggesting that goose species frequently use the same habitats during migration. Co-occurrence patterns among dabbling ducks were not different than expected by chance in any year; however, when we evaluated co-occurrence at a weekly scale, dabbling ducks co-occurred less often than expected during weeks of peak migration (high abundance), indicating that dabbling duck species spatially segregated at high densities. Diving duck co-occurrence patterns did not differ from random in any year, suggesting that diving duck species used the same habitats during migration. Shorebird species co-occurred less often than expected in 2002 and 2004, and during weeks of high shorebird abundance, indicating that shorebird communities were distinctly structured during those times. Most association values among lesser snow geese (Chen caerulescens) and dabbling duck species were positive, indicating dabbling ducks did not avoid wetlands with snow geese, a concern for waterfowl managers. However, we frequently observed snow geese and dabbling ducks using different microhabitats within a wetland, which indicate species associations and co-occurrence patterns may have occurred at a finer spatial scale than we measured. This approach of co-occurrence analysis will allow wildlife managers charged with multispecies management at migration stopover sites to make informed conservation and management decisions based on community structure rather than historic single-species approaches.     

Selecting for extinction: nonrandom disease-associated extinction homogenizes amphibian biotas

Studying the patterns in which local extinctions occur is critical to understanding how extinctions affect biodiversity at local, regional and global spatial scales. To understand the importance of patterns of extinction at a regional spatial scale, we use data from extirpations associated with a widespread pathogenic agent of amphibian decline, Batrachochytrium dendrobatidis ( Bd ) as a model system. We apply novel null model analyses to these data to determine whether recent extirpations associated with Bd have resulted in selective extinction and homogenization of diverse tropical American amphibian biotas. We find that Bd -associated extinctions in this region were nonrandom and disproportionately, but not exclusively, affected low-occupancy and endemic species, resulting in homogenization of the remnant amphibian fauna. The pattern of extirpations also resulted in phylogenetic homogenization at the family level and ecological homogenization of reproductive mode and habitat association. Additionally, many more species were extirpated from the region than would be expected if extirpations occurred randomly. Our results indicate that amphibian declines in this region are an extinction filter, reducing regional amphibian biodiversity to highly similar relict assemblages and ultimately causing amplified biodiversity loss at regional and global scales.     

Patterns and correlates of plant diversity differ between common and rare species in a neotropical dry forest

Determining which factors affect species richness is important for conservation theory and practice. However, richness of common and rare species may be affected by different factors. We use an extensive inventory of woody plants from a tropical dry forest landscape in Yucatan, Mexico to assess the unique effects of environmental variables, spatial dependence of sampling sites, forest stand age and the combined effect of all groups of variables on species richness of woody plants with different levels of rarity (common, intermediate, rare, very rare)—according to their abundance, habitat specificity and spatial distribution range in the landscape. Analyzing separately common species and those with different levels of rarity uncovered contrasting patterns and correlates of species richness that were not apparent when focusing on all woody plants. In particular, richness of common and intermediate species was influenced mainly by environmental factors, whereas richness of very rare species was affected mostly by the unique effect of spatial dependence of sampling sites, suggesting a main role of environmental filtering and dispersal limitation, respectively. However, common and very rare species also responded inversely to some landscape metrics, revealing contrasting environmental preferences of these groups of species. These contrasting results suggest different underlying mechanisms and the need for very different conservation strategies. Therefore, basic and applied research on tropical forest biodiversity should consider separately species with different levels of rarity, focusing on which factors control variation in each level, and paying special attention to very rare species, generally the most specious and vulnerable to local extinction.     

Effects of habitat size and isolation on species immigration–extinction dynamics and community nestedness in a desert river system

相似文献   

Geographical expansion and increased prevalence of common species in avian assemblages: implications for large-scale patterns of species richness

Aim The assumption that ecological patterns at large spatial scales originate exclusively from non‐anthropogenic processes is growing more questionable with the increasing domination of the biosphere by humans. Because common and rare species are known to respond differently to anthropogenic activities at local scales these differential responses could, over time, be reflected in distributional patterns of species richness at larger spatial scales. This work tests the hypothesis that modern processes have played a role in shaping these patterns, by examining recent changes in the structure and composition of assemblages of breeding avifauna over a large geographical extent. Location The portion of North America containing the contiguous United States and southern Canada. Methods Changes in the geographical range structure of breeding avifauna in North America from 1968 to 2003 were analysed in regions containing historically moderate levels of anthropogenic activities. Two geographical measures, extent of occurrence and area of occupancy, were used to identify the level of rarity or commonality of individual species and to estimate, based on a vector analysis, patterns of change in geographical range structure for individual species and avian assemblages. Results More species experienced patterns of geographical range expansion (51%) than contraction (28%). The majority of avian assemblages (43%) displayed patterns of geographical range expansion: common species increased in number and proportion (6%) in association with reciprocal losses in rare and moderately rare species, resulting in a constant level of species richness. The minority of avian assemblages (21%) displayed patterns of geographical range contraction: gains occurred for common species as well as for rare and moderately rare species, resulting in substantial increases in species richness and a decline in the proportion of common species (4%). The remaining avian assemblages presented equivocal patterns characterized by gains in the number and proportion (2%) of common species and gains in species richness. Main conclusions Modern processes have played a role in shaping the distribution patterns of species richness at large spatial scales based on the composition of common and rare species. This suggests that anthropogenic activities cannot be ignored as a possible causal factor when considering ecological patterns at large spatial scales.     

Patterns of rare fish and aquatic insects in a southwestern French river catchment in relation to simple physical variables

Most of our current understanding of rarity has come from studies of terrestrial plants and animals, whereas freshwater habitats remain poorly documented under this topic. Here we considered the spatial distribution patterns of rarity at the river catchment scale, for five freshwater taxa (fish, Ephemeroptera, Plecoptera, Trichoptera and Coleoptera) in southwestern France. The data were collected at 554 and 155 sampling sites for fish and aquatic insects, respectively. General Linear Modelling was used to assess the influence of some typological variables (elevation, stream order, distance from source, and reach slope) on local numbers of rare species (restricted range). The relative numbers of rare species per taxa varied from 16% (Plecoptera) to 59% (Trichoptera). GLM chiefly yielded highly significant correlations between rarity and distance from the source and/or elevation for all taxa, showing that numbers of rare stream species increase towards downstream areas within the stream system. The spatial patterns in rarity for the different study taxa were rather concordant, probably as a result of similar responses to environmental conditions. By focusing on integrative variables, we emphasized the influence of river typology on the rarity of aquatic animals. Areas which carry rare species may concentrate an important fraction of the regional biodiversity. If end-users need geographic models (i.e. maps) to design river management frameworks, numerical patterning is needed to provide theoretical backgrounds: by predicting what the rarity should be like in a given area, we can provide explicit spatial schemes that may be useful to target further research, and to implement management options.     

Diet breadth,coexistence and rarity in bumblebees

Factors that determine the relative abundance of bumblebee species remain poorly understood, rendering management of rare and declining species difficult. Studies of bumblebee communities in the Americas suggest that there are strong competitive interactions between species with similar length tongues, and that this competition determines the relative abundance of species. In contrast, in Europe it is common to observe several short-tongued species coexisting with little or no evidence for competition shaping community structure. In this study we examine patterns of abundance and distribution in one of the most diverse bumblebee communities in Europe, found in the mountains of southern Poland. We quantify forage use when collecting nectar and pollen for 23 bumblebee species, and examine patterns of co-occurrence and niche overlap to determine whether there is evidence for inter-specific competition. We also test whether rarity can be explained by diet breadth. Up to 16 species were found coexisting within single sites, with species richness peaking in mountain pasture at ~1,000 m altitude. Results concur with previous studies indicating that the majority of pollen collected by bumblebees is from Fabaceae, but that some bee species (e.g. B. ruderatus) are much more heavily dependent on Fabaceae than others (e.g. B. lucorum). Those species that forage primarily on Fabaceae tended to have long tongues. In common with studies in the UK, diet breadth was correlated with abundance: rarer species tended to visit fewer flower species, after correcting for differences in sample size. No evidence was found for similarity in tongue length or dietary overlap influencing the likelihood of co-occurrence of species. However, the most abundant species (which co-occurred at most sites) occupied distinct dietary niche space. While species with tongues of similar length tended, overall, to have higher dietary niche overlap, among the group of abundant short-tongued species that commonly co-occurred there was marked dietary differentiation which may explain their coexistence.     

Taxonomic and functional homogenization of an endemic desert fish fauna

Aim The highly endemic fishes of the arid Southwest USA have been heavily impacted by human activities resulting in one of the most threatened fish faunas in the world. The aim of this study was to examine the patterns and drivers of taxonomic and functional beta diversity of freshwater fish in the Lower Colorado River Basin across the 20th century. Location Lower Colorado River Basin (LCRB). Methods The taxonomic and functional similarities of watersheds were quantified to identify patterns of biotic homogenization or differentiation over the period 1900–1999. Path analysis was used to identify the relative influence of dam density, urban land use, precipitation regimes and non‐native species richness on observed changes in fish faunal composition. Results The fish fauna of the LCRB has become increasingly homogenized, both taxonomically (1.1% based on β_sim index) and functionally (6.2% based on Bray–Curtis index), over the 20th century. The rate of homogenization varied substantially; range declines of native species initially caused taxonomic differentiation (?7.9% in the 1960s), followed by marginal homogenization (observed in the 1990s) in response to an influx of non‐native species introductions. By contrast, functional homogenization of the basin was evident considerably earlier (in the 1950s) because of the widespread introduction of non‐native species sharing similar suites of biological traits. Path analysis revealed that both taxonomic and functional homogenization were positively related to the direct and indirect (facilitation by dams and urbanization) effects of non‐native species richness. Main conclusions Our study simultaneously examines rates of change in multiple dimensions of the homogenization process. For the endemic fish fauna of the LCRB, we found that the processes of taxonomic and functional homogenization are highly dynamic over time, varying both in terms of the magnitude and rate of change over the 20th century.     

Patterns of rare woody species richness: the influence of environment, landscape attributes and spatial structure across different spatial scales

The aim of this study was to evaluate the relative contributions of the environment, landscape patterns, and spatial structure to explaining the variation in richness of rare woody species at three levels of rarity (low, medium, and high) and at different grain sizes and spatial extents. We used herbarium records of 195 rare woody species to quantify species richness—overall and for three levels of rarity—of the Yucatan Peninsula, Mexico. We assessed relationships between rare species richness and different sets of explanatory variables (environmental, landscape patterns, and spatial structure of sampling units) using linear regression and variation partitioning analyses at three grain sizes (625, 400, and 225 km²). We also conducted a principle coordinates of neighbor matrices analysis to allow interpretation of the results in terms of different spatial extents. The percentage of variation in rare species richness explained by the models was highest for the largest grain size and spatial extent. At the larger extents, rare species richness was explained mainly by the environment, whereas landscape patterns played a more prominent role at the local extent. Landscape patterns also contributed more to explaining species richness at low to medium levels of rarity, whereas the richness of extremely rare species was better explained by spatial structure. We conclude that the relative contribution of the factors explaining the variation of rare species richness depends on both grain and extent, as well as on the level of rarity. These results underscore the importance of considering the different components of scale (grain and extent) as well as different levels of species rarity in order to better understand the patterns of distribution of rare species richness and to be able to frame appropriate conservation strategies.     

Where the rare species are

Prioritizing geographic areas for conservation attention is important – time and money are in short supply but endangered species are not – and difficult. One popular perspective highlights areas with many species found nowhere else ( Myers et al. 2000 ). Another identifies areas that contain species with fewer close relatives elsewhere ( Faith 1992 ). One might characterize the first as focusing on geographic, and the second on phylogenetic, rarity. To the extent that geographically rare species are at greater risk of extinction ( Gaston & Fuller 2009 ), and that phylogenetically rare species contribute disproportionally to overall biodiversity ( Crozier 1997 ), it would seem reasonable to formally integrate the two approaches. In this issue, Rosauer et al. (2009) do just that; their elegant combined metric pinpoints areas missed out when the two types of rarity are looked at in isolation.     

How plant life‐history and ecological traits relate to species rarity and commonness at varying spatial scales

Comparative studies investigating relationships between plant traits and species rarity and commonness were surveyed to establish whether global patterns have emerged that would be of practical use in management strategies aimed at the long‐term conservation of species. Across 54 studies, 94 traits have been examined in relation to abundance, distribution and threatened status at local, regional and geographical spatial scales. Most traits (63) have yet to be the focus of more than one study. Half of the studies involved less than 10 species, and one‐quarter did not replicate rare–common contrasts. Although these features of the literature make it difficult to demonstrate robust generalizations regarding trait relationships with species rarity, some important findings surfaced in relation to traits that have been examined in two or more studies. Species with narrow geographical distributions were found to produce significantly fewer seeds (per unit measurement) than common species (in four of six studies), but did not differ with respect to breeding system (five of five studies). The majority of traits (including seed size, competitive ability, growth form and dispersal mode) were related to rarity in different ways from one study to the next. The highly context‐dependent nature of most trait relationships with rarity implies that application of knowledge concerning rare–common differences and similarities to management plans will vary substantially for different vegetation types and on different continents. A comparative analysis of distribution patterns in relation to several life‐history and ecological traits among 700 Australian eucalypt species was then performed. A significantly dispro­portionate number of tall species and species with long flowering durations had wide geographical ranges. Trait relationships with distribution were explored further through the development of a methodology incorporating multiple spatial scales. Eight theoretical categories were described illustrating variation in distribution patterns (and hence rarity and commonness) across small, intermediate and large spatial scales, based on the spatial structure of species occurrence across the Australian landscape. Each eucalypt species was placed into a category, and trait variation was explored across all species in relation to distribution patterns across multiple spatial scales. This approach yielded important information about trait relationships with distribution among the eucalypts, linking the spatial structure of points‐of‐occurrence with patterns of rarity and commonness. With the pressing need to protect increasing numbers of threatened species and slow rates of extinction, the development and refinement of a broadly usable methodology for rarity studies that encompasses multiple spatial scales, which can be used for any geographical location, will be useful in both conservation and management.     

Drivers and interrelationships among multiple dimensions of rarity for freshwater fishes

Species can be rare or common in three different dimensions: geographic range size, habitat breadth, and local abundance. Understanding drivers of rarity are not only fundamentally interesting; it is also pertinent for their conservation. We addressed this challenge by analyzing the rarity of 291 native freshwater fishes occurring in ca 3500 independent stream reaches that span a broad environmental gradient across continental USA. Using phylogenetic regression and path analysis, we examined the concordance among the three rarity dimensions, and identified possible mechanisms by which species life‐history, habitat affinities, and biogeography drive variation in rarity. Weak double extinction jeopardies were driven by weakly positive correlations between habitat breadth and local abundance, and between habitat breadth and geographic range size. However, a triple extinction jeopardy was averted as local abundance and range size were not positively linked in our study. This is because large‐river and lacustrine habitat use mediated a trade‐off between local abundance and range size. Large rivers and lacustrine habitats represent important dispersal pathways and refugia that enabled fishes to acquire wide ranges; however, species using these habitats are less abundant overall because they are less adapted to small lotic channels, which comprise the majority of stream habitats in the US. Life‐history traits were key in governing the relationship between abundance and range size as large‐river and lacustrine habitat use were driven by body size, egg size, and parental care. Our analysis contributes novel insights into mechanisms that underlie multiple dimensions of rarity in freshwater fish and informs the prioritization of multiply rare species for conservation.     

Length–weight relationships of fish species from Lower Paranapanema River Basin,Upper Paraná River Basin,Brazil

Length–weight relationships were estimated for six fish species occurring in direct tributaries of the Lower Paranapanema River Basin. Data is described for the first time for five species and new measurements are provided for one species in the FishBase database. Studies of fish diversity are critical for species management and conservation, especially in this basin, which has suffered from many anthropical impacts.     

Occurrence of stones, sediment and fish scales in stomach contents of demersal fish of the Rockall Trough

The occurrence of stones, sediment and fish scales was determined among the stomach contents of some 5000 fish. These fish comprised representatives of more than 70 different demersal species, sampled at 250 m bathymetric intervals, from the Rockall Trough, northeastern Atlantic Ocean, at depths ranging from 500 to 2900 m. Stones only occurred in stomachs of fish caught at 500–1000 m depth, their incidence in stomachs with food present being 4.6% at 500m, 1.1% at 750 m and 1.3% at 1000m depth. Sediment occurred in 9%, fish scales in 7%, of stomachs with contents. Sediment and scales co-occurred in the stomachs of primarily benthopelagic feeding fish. The sediment, however, was associated with the less dominant epibenthic components of the diets while the scales occurred with the more common benthopelagic components. The co-occurrence of sediment, scales and benthopelagic prey may arise through the former items having longer residence times in the stomachs than, for example, epibenthic prey. There is no evidence of increased occurrence of sediment (and its associated meiofauna) in the diets of fish on the lower slope at depths of 1500–2900 m in the Rockall Trough.     

Illuminating geographical patterns in species' range shifts

Species' range shifts in response to ongoing climate change have been widely documented, but although complex spatial patterns in species' responses are expected to be common, comprehensive comparisons of species' ranges over time have undergone little investigation. Here, we outline a modeling framework based on historical and current species distribution records for disentangling different drivers (i.e. climatic vs. nonclimatic) and assessing distinct facets (i.e. colonization, extirpation, persistence, and lags) of species' range shifts. We used extensive monitoring data for stream fish assemblages throughout France to assess range shifts for 32 fish species between an initial period (1980–1992) and a contemporary one (2003–2009). Our results provide strong evidence that the responses of individual species varied considerably and exhibited complex mosaics of spatial rearrangements. By dissociating range shifts in climatically suitable and unsuitable habitats, we demonstrated that patterns in climate‐driven colonization and extirpation were less marked than those attributed to nonclimatic drivers, although this situation could rapidly shift in the near future. We also found evidence that range shifts could be related to some species' traits and that the traits involved varied depending on the facet of range shift considered. The persistence of populations in climatically unsuitable areas was greater for short‐lived species, whereas the extent of the lag behind climate change was greater for long‐lived, restricted‐range, and low‐elevation species. We further demonstrated that nonclimatic extirpations were primarily related to the size of the species' range, whereas climate‐driven extirpations were better explained by thermal tolerance. Thus, the proposed framework demonstrated its potential for markedly improving our understanding of the key processes involved in range shifting and also offers a template for informing management decisions. Conservation strategies would greatly benefit from identifying both the geographical patterns and the species' traits associated with complex modifications of species' distributions in response to global changes.     

Habitat fragmentation and extinction rates within freshwater fish communities: a faunal relaxation approach

Aim To estimate population extinction rates within freshwater fish communities since the fragmentation of palaeo‐rivers due to sea level rise at the end of the Pleistocene; to combine this information with rates estimated by other approaches (population surveys, fossil records); and to build an empirical extinction–area relationship. Location Temperate rivers from the Northern Hemisphere, with a special focus on rivers discharging into the English Channel, in north‐western France. Methods (1) French rivers. We used a faunal relaxation approach to estimate extinction rates in coastal rivers after they became isolated by the sea level rise. Tributaries within the Seine were used to build a species–area relationship for a non‐fragmented river system to predict species richness in coastal rivers before their fragmentation. (2) Other rivers. Extinction rates obtained for four other Holarctic river systems fragmented at the end of the Pleistocene, the fragmented populations of one salmonid species (Japan) and the fossil records from the Mississippi Basin were included in the study. Results (1) French rivers. Within strictly freshwater fish species, rare and/or habitat specialist species were the most affected by fragmentation. In contrast, euryhaline species were not affected. A negative relationship between extinction rate and river basin size was observed. (2) Other rivers. Our study established a common scaling relationship for freshwater fish population extinction rates that spans seven orders of magnitude in river basin size. Main conclusions This study strongly suggests that extinctions of fish populations occurred within French coastal rivers after they became isolated 8000 years ago. The patterns observed at regional and inter‐continental scales are consistent with the expectation that large populations are less prone to extinction than small ones, resulting in a strong extinction–area relationship coherent over a large spatio‐temporal scale. Our study is the first multi‐scale quantitative assessment of background extinction patterns for freshwater fishes.     

The contribution of geographically common and rare species to the spatial distribution of biodiversity

Motivation and aim

Mapping the spatial distribution of biodiversity is critical for understanding its fundamental drivers (e.g. speciation, environmental filtering) as well as for conservation assessment. An important dimension of this topic is how the distributions of subsets of species contribute to the overall distribution of biodiversity. Although studies have previously investigated the role of geographically common and rare species in determining these patterns, their respective contributions appear to vary between studies. Knowing which species contribute disproportionately to the spatial distribution of biodiversity enables the identification of key indicator species for biodiversity assessments across large areas and is important for prioritising areas for conservation actions. An extensive review of the literature was carried out to synthesise research on how geographic rarity contributes to spatial patterns of biodiversity. We identify potential explanations for the discrepancies in findings between studies and identify opportunities for further research.

Results

Many studies on the contribution of geographic commonness and rarity to the spatial distribution of biodiversity focus on species richness. A prevalent view is that common (widespread) species contribute disproportionately, although this is not ubiquitous across studies due to factors such as the geographic extent from which relative rarity is quantified. We identify research pathways that will further improve our knowledge of how geographically common and rare species shape the spatial distribution of biodiversity including the impact of spatial scale on species contributions and the incorporation of biodiversity components beyond taxonomic alpha diversity, that is functional and phylogenetic diversity.

Main conclusions

Future research should incorporate multiple biodiversity components and model scale dependency. This will further our knowledge on the underlying processes that shape the spatial variation of biodiversity across the planet and help inform biological surveys and conservation activities.     

怒江流域鱼类多样性及空间分布格局

怒江是我国西南地区重要的国际河流, 也是全球生物多样性热点区域之一。受地理位置和地形条件限制, 目前尚缺乏怒江流域鱼类物种多样性及其分布格局的系统研究。本研究利用近5年的全流域实地采样数据, 结合文献资料, 系统整理了怒江流域鱼类物种组成信息; 利用聚类和排序方法分析了怒江流域鱼类空间分布格局。结果表明, 怒江流域共有土著鱼类85种, 隶属于5目12科47属; 外来鱼类18种, 隶属于3目8科16属, 另外实地调查发现新记录外来种2种。怒江流域鱼类多样性从上游至下游呈明显的递增趋势。根据土著鱼类组成的聚类和排序分析结果, 可以将怒江25个亚流域分为3个部分: (1)西藏自治区内的上游河段, 分布有鱼类15种, 组成以裂腹鱼类、高原鳅类为主, 具有明显青藏高原冷水性鱼类区系特征。(2)贡山至泸水的中游河段, 分布有鱼类36种, 组成兼有上游冷水性鱼类和下游喜温的鲃亚科、野鲮亚科鱼类。(3)泸水以下的下游河段, 分布有鱼类74种。下游河段干流广泛分布有喜温的鲃亚科、野鲮亚科和 亚科鱼类, 支流则分布有数量众多的南鳅属(Schistura)、纹胸鮡属(Glyptothorax)鱼类, 鱼类组成以适应流水、激流环境的热带亚热带鱼类为主。2017-2021年的多次调查仅发现土著鱼类43种(占历史记录的50.6%), 土著鱼类资源衰退明显。过度捕捞、支流小水电开发、外来鱼类入侵等是主要威胁因素。随着人类活动的急剧增多, 怒江流域鱼类将面临更大的威胁, 亟需从流域层面开展系统的鱼类资源管理和保护规划。