Genetic structure of the shrub Daphne laureola across the Baetic Ranges, a Mediterranean glacial refugium and biodiversity hotspot

Distribution margins constitute areas particularly prone to random and/or adaptive intraspecific differentiation in plants. This trend may be particularly marked in species discontinuously distributed across mountain ranges, where sharp geographic isolation gradients and habitat boundaries will enhance genetic isolation among populations. In this study, we analysed the level of neutral genetic differentiation among populations of the long-lived shrub Daphne laureola (Thymelaeaceae) across the Baetic Ranges, a glacial refugium and biodiversity hotspot in the western Mediterranean Basin. Within this area, core and marginal populations of D. laureola were compared with regard to their spatial isolation, size, genetic diversity and differentiation. A spatially explicit analysis conducted on the vast majority of the species' known populations in the study area (N = 111) showed that marginal populations (western and eastern) present larger spatial isolation than core populations, but are not smaller. We compared genetic diversity and differentiation between core and marginal populations using a subsample of 15 populations and 225 amplified fragment length polymorphism (AFLP) markers. Core and marginal populations did not differ in genetic diversity, probably because of the occurrence of large populations on the local margins. Western populations were strongly differentiated from the other populations. In addition, spatial and genetic differentiation among populations was larger on the western margin. Eastern populations constituted a genetically homogeneous group closely related to core populations, despite their greater spatial isolation. Results suggest that studies on phenotypic differentiation between core and marginal populations of D. laureola, and presumably other species having discontinuous distributions across the Baetic ranges, should take into account geographical differences in levels of genetic differentiation between the different distribution borders.     

Reproductive patterns in central and marginal populations of a large brown seaweed: drastic changes at the southern range limit

Understanding the factors determining geographic ranges and range shifts of species is a central issue in ecology and evolutionary biology. Research addressing distributional borders from a demographic perspective frequently focused on reproductive traits, finding reproduction reductions or failure at the range margin. However, some of the observed changes in marginal locations could be the result of adaptive adjustments to local, unfavourable conditions, though they have been rarely interpreted from this point of view. In this study we investigated the reproductive patterns of the seaweed Fucus serratus in central and southern marginal locations (SW UK, N Spain) over a 3‐yr period. Our main goals were: 1) to determine the spatial (centre‐margin) and temporal variation in reproductive traits and 2) to test if this variation fits with life‐history predictions for stressful environments. Threshold size for reproduction declined at the range margin, in accordance with life‐history predictions. Nevertheless, we also observed parallel drastic reductions in the percentage of reproductives, reproductive allocation and plant size. The reproductive capacity of marginal locations was thus dramatically reduced in relation to central ones. Furthermore, the decline became more pronounced over the study period. Our results suggests that the viability of marginal populations is at risk. This situation clearly differs from the pattern observed during the last decade. At that time, the species was able to growth and reproduce beyond its distributional boundary at similar rates than inside its range in N Spain. The seaweed was then expanding its distribution and the position of the boundary was set by dispersal limitations. At present, the southern boundary of this species seems to be directly influenced by very unfavourable abiotic conditions, which may be linked to the present scenario of climatic change or to environmental fluctuations acting at shorter‐time scales.     

Climatic adaptation of Drosophila buzzatii populations in southeast Australia

Variation in 19 traits possibly relevant for thermal adaptation was studied in 11 populations of Drosophila buzzatii collected in southeast Australia. Using stepwise multiple regression, the variation was compared to variation in geographic coordinates and to a set of climatic variables estimated for each collection site. For 13 of the traits, a significant part of the variation was explained by climatic variables and/or geographic coordinates, suggesting directional selection for adaptation to the environment in the majority of traits studied. In 10 of the traits, both geographic coordinates and climatic variables explained significant proportions of the variation, with R2 ranging from 0.075 to 0.58. Although larvae, pupae and adults of D. buzzatii share a common habitat, the measured traits were not correlated across life stages and gender. Also, there seemed to be special conditions in marginal populations near species borders, giving rise to nonlinear relations with latitude. Climate apparently does influence the adaptive evolution of the traits studied, but they also are affected by other factors that vary with latitude, longitude and distance to coast. These results highlight the complex challenges imposed by the environment on the adaptive process.     

Overwintering sparrow use of field borders planted as beneficial insect habitat

Field borders are an effective conservation strategy for providing habitat to overwintering sparrows, and may be a venue through which beneficial insect populations are promoted. However, traditional fallow field borders lack sufficient pollen and nectar sources required to sustain beneficial insect populations; therefore, borders planted to a mix of native prairie flowers and grasses may be needed if increases in beneficial insect populations are desired. Although the value of fallow borders to birds has been established, little is known about bird use of beneficial insect habitats. Using single-observer transect surveys, we compared overwintering sparrow densities among 4 field border treatments (planted native warm season grasses and prairie flowers, planted prairie flowers only, fallow, and mowed) replicated around 9 organic crop fields from November to March 2009–2010 and 2010–2011. Sparrow densities were 5–10 times lower in mowed borders than in other border treatments in 2009–2010 and 2010–2011, but did not differ among planted and fallow borders in either year. Planted field borders may be a useful conservation practice for providing habitat for both overwintering sparrows and beneficial insects. © 2012 The Wildlife Society.     

Developmental variability and the limits of adaptation: Interactions with stress

1. Little evolutionary change may occur at species borders since the cost of accommodating environmental stresses is high. Extreme examples of such stasis include cave animals in stable stressed environments and ‘living fossils’ in widely fluctuating stressed environments. 2. Variability from the molecular to the organismic level tends to be high under extreme stress. At the developmental level, the fitness of such variants may be low. This means that much developmental variability in natural populations may have little evolutionary significance. 3. Rapid evolutionary change of morphological traits is most likely to be based upon genes acting late in a developmental pathway under conditions which are ecologically and energetically permissive. 4. Although some increases in resistance to temperature extremes have been recorded in laboratory selection experiments, major extensions of extremes in natural populations appear difficult to achieve. The energetic costs of surviving extremes at species borders implies that the evolution of major developmental and morphological shifts is more likely to be a feature of populations of more equable habitats.     

Wild O chromosomes of Drosophila subobscura from different geographic regions have different effects on viability

By means of the marker strain Va/Ba wild chromosomes O of Drosophila subobscura were extracted from eight natural populations situated on a north-south gradient from Sweden or Scotland to Tunesia. Lethal frequencies and viability effects of the wild chromosomes O were studied in homozygous and random heterozygous combinations. In accordance with results from other Drosophila species random heterozygotes were always more viable than homozygotes. The viability-determining polygene system proved, however, dominant to some degree. Geographic differences became apparent especially with respect to three different characteristics: (1) The lethal frequencies for chromosomes O from central populations are higher than for those from northern and southern marginal populations; (2) Mean viabilities of non-lethal homozygotes and random heterozygotes are lower for central than for marginal populations; (3) The increase of viability through heterozygosity is more pronounced in the northern populations than in the others. The differences are thought to be mainly due to differences in the adaptation strategy of marginal and central populations. The viability fitness components seem of more importance for the marginal populations while fertility components may be of greater weight under central conditions. The geographic variability of the viability polygene system is finally compared with that of other genetic traits in D. subobscura.     

Local adaptations to frost in marginal and central populations of the dominant forest tree Fagus sylvatica L. as affected by temperature and extreme drought in common garden experiments

Local adaptations to environmental conditions are of high ecological importance as they determine distribution ranges and likely affect species responses to climate change. Increased environmental stress (warming, extreme drought) due to climate change in combination with decreased genetic mixing due to isolation may lead to stronger local adaptations of geographically marginal than central populations. We experimentally observed local adaptations of three marginal and four central populations of Fagus sylvatica L., the dominant native forest tree, to frost over winter and in spring (late frost). We determined frost hardiness of buds and roots by the relative electrolyte leakage in two common garden experiments. The experiment at the cold site included a continuous warming treatment; the experiment at the warm site included a preceding summer drought manipulation. In both experiments, we found evidence for local adaptation to frost, with stronger signs of local adaptation in marginal populations. Winter frost killed many of the potted individuals at the cold site, with higher survival in the warming treatment and in those populations originating from colder environments. However, we found no difference in winter frost tolerance of buds among populations, implying that bud survival was not the main cue for mortality. Bud late frost tolerance in April differed between populations at the warm site, mainly because of phenological differences in bud break. Increased spring frost tolerance of plants which had experienced drought stress in the preceding summer could also be explained by shifts in phenology. Stronger local adaptations to climate in geographically marginal than central populations imply the potential for adaptation to climate at range edges. In times of climate change, however, it needs to be tested whether locally adapted populations at range margins can successfully adapt further to changing conditions.     

Living on the edge: do central and marginal populations of plants differ in habitat suitability?

The performance of populations at the edge of specie’s distribution range may differ substantially from central populations. Here, we develop a modelling framework to estimate ecological niches (i.e. climatic) of four locally endangered plant species and measure the distance of marginal (geographically) populations to the species’ niche centroid in order to analyse whether marginal populations are outside of the optimal ecological niche of each species. Our results show that for three of the four studied species, which have their populations located at the margins of their distribution ranges, are also at the margins of their climate gradients. These results would support the hypothesis that marginality within the set of habitable conditions (i.e. ecological niche) may represent an important determinant on performance of some plant populations, as well as a plausible explanation to the degree of stagnancy or regression experienced by species in those regions where their populations are at the margin of their ecological niche and/or they are restricted to microrefugia with ecological conditions very different from those around them. Finally, this study aims to be a theoretical base from which to advance on, including other types of factors (e.g. biotic interactions, topography, human influence and population fluctuations through time), which will allow for a better understanding of the complex network of factors that occur in marginal plant populations.     

MORPHOLOGICAL AND GENETIC VARIATION IN ECOLOGICALLY CENTRAL AND MARGINAL POPULATIONS OF RUMEX ACETOSELLA L. (POLYGONACEAE)

Six ecologically central (old field) and marginal (strip mine) populations of the hexaploid Rumex acetosella were collected, grown under uniform conditions, and examined for genetic and morphological variation. Extensive electrophoretic variation was found in alcohol dehydrogenase and phosphoglucose isomerase, while other enzymes surveyed showed little or no variation. Hedrick's genotypic measure of identity revealed mean values of 0.506 for central populations, 0.836 for marginal populations, and 0.633 for comparisons of central with marginal populations. Alcohol dehydrogenase phenotypes had significantly fewer electromorphs per individual in marginal populations. Clones of individuals from both environments were subjected to different watering regimes. No significant differences in root/shoot ratio, leaf number, total leaf area, or relative growth rate were found between strip mine and old-field individuals within each watering treatment, although significant differences were found between watering treatments. There are small, but significant amounts of isozyme differentiation between central and marginal populations, while there was no such differentation for morphological characters.     

Genetic Divergence and Signatures of Natural Selection in Marginal Populations of a Keystone,Long-Lived Conifer,Eastern White Pine (Pinus strobus) from Northern Ontario

Marginal populations are expected to provide the frontiers for adaptation, evolution and range shifts of plant species under the anticipated climate change conditions. Marginal populations are predicted to show genetic divergence from central populations due to their isolation, and divergent natural selection and genetic drift operating therein. Marginal populations are also expected to have lower genetic diversity and effective population size (N _e) and higher genetic differentiation than central populations. We tested these hypotheses using eastern white pine (Pinus strobus) as a model for keystone, long-lived widely-distributed plants. All 614 eastern white pine trees, in a complete census of two populations each of marginal old-growth, central old-growth, and central second-growth, were genotyped at 11 microsatellite loci. The central populations had significantly higher allelic and genotypic diversity, latent genetic potential (LGP) and N _e than the marginal populations. However, heterozygosity and fixation index were similar between them. The marginal populations were genetically diverged from the central populations. Model testing suggested predominant north to south gene flow in the study area with curtailed gene flow to northern marginal populations. Signatures of natural selection were detected at three loci in the marginal populations; two showing divergent selection with directional change in allele frequencies, and one balancing selection. Contrary to the general belief, no significant differences were observed in genetic diversity, differentiation, LGP, and N _e between old-growth and second-growth populations. Our study provides information on the dynamics of migration, genetic drift and selection in central versus marginal populations of a keystone long-lived plant species and has broad evolutionary, conservation and adaptation significance.     

Some consideration on diversifying selection

The diversifying selection due to genotype-environment interaction can increase the genetic variation in natural populations. It is known, however, that the conditions for stable genetic polymorphism or marginal overdominance are quite restricted in this selection model. In this paper a simple model of diversifying selection was examined, and the following results were obtained: (1) Even when the conditions for marginal overdominance are not satisfied, if the diversifying selection is operating, the frequency of mutants can be higher than that in the case of simple mutation-selection balance. (2) This selection model causes a large amount of genetic load (environment load), even when the conditions for marginal overdominance are not satisfied, namely even when the equilibrium frequency of mutant is very low. From these results it can be concluded that the number of loci on which this type of diversifying selection is operating is very small, if any.     

FLUCTUATING ASYMMETRY IN CENTRAL AND MARGINAL POPULATIONS OF LYCHNIS VISCARIA IN RELATION TO GENETIC AND ENVIRONMENTAL FACTORS

Developmental instability in the form of increased fluctuating asymmetry can be caused by either genetic or environmental stress. Because extinctions can be attributed broadly to these factors, fluctuating asymmetry may provide a sensitive tool for detecting such stresses. We studied the level of fluctuating asymmetry of flowers of a perennial outcrossing plant species, Lychnis viscaria, both in natural and common-garden populations. The degree of flower asymmetry was higher in small, isolated, and marginal populations of the species range. These marginal populations also were the most homozygous. In the core area of the species' range, flowers were more symmetrical The level of asymmetry was correlated with both population size and heterozygosity. However, a partial correlation analysis revealed that when the impact of population size was controlled for, there was a negative relationship between fluctuating asymmetry and heterozygosity, whereas when controlling for heterozygosity, no relationship between population size and fluctuating asymmetry was found. This indicates that genetic consequences of small population size probably underlie the relationship between the level of asymmetry and population size. Results from a transplantation experiment showed that individuals subjected to a higher environmental stress had an increased level of asymmetry compared to control plants. In the common-garden conditions the level of fluctuating asymmetry did not differ between the central and marginal populations. This suggests that presumably both genetic and environmental factors affected to the higher level of asymmetry among marginal populations compared to central ones. In all we conclude that even though fluctuating asymmetry seems to be a sensitive tool for detecting stresses, results from studies focusing on only one factor should be interpreted with caution.     

In Search of the Barbarians: Borders in Pain

Mobile populations of Albanians have made the Greek borders the site where identity is played out and defined. At the same time, media panic stories about disease crossing Greek frontiers point to the borders as infection: they leak not only people but contamination. Yet these borders are bidirectional, and create risks for the Albanians as well. Their continued migrations in the face of risk point to the borders as process. These are borders in pain, borders that ache and leak.     

Winter Avian Community and Sparrow Response to Field Border Width

Abstract: Transformations of agricultural practices in the southeastern United States have drastically reduced preexisting quantities of strip-cover habitat along field margins. The National Conservation Buffer Initiative has promoted the establishment of herbaceous field borders to restore wildlife benefits once provided by such habitat. We evaluated effects of native warm-season grass field border establishment and width on winter bird response. Narrow (approx. 8-m) field borders represented a marginal improvement to non-bordered margins that were cropped ditch to ditch, whereas wide (approx. 30-m) borders significantly enhanced total avian conservation value, abundance, species richness, and sparrow abundance compared to non- or narrow borders. Furthermore, presence of wide borders altered bird use of row-crop fields. We observed increased sparrow (Emberizidae) abundances in agricultural fields adjacent to wide borders, which likely resulted from enhanced waste grain foraging opportunities. Given these benefits to wintering farmland birds, we advocate the integration of herbaceous field border habitat in agricultural landscapes, particularly borders of enhanced width.     

Invasion of rocky shores by a mytilid mussel reveals an abundant-centre distribution coupled with moderate increases in densities at its absolute range limits

Semimytilus patagonicus is an invasive mussel on the coast of southern Africa and has extended its range in recent years. We asked whether its distribution and abundance are consistent with the abundant-centre hypothesis (ACH). Marginal populations were located by monitoring 33 rocky shore sites in South Africa and southern Namibia in 2021. This revealed no changes to its distributional limits since 2020. At nine of these sites, population demography was measured to allow a comparison of their densities and size structure. Four were central populations on the west coast of South Africa (including the site where the species was first detected in 2009). Four were marginal populations in South Africa: two towards the cold range edge in the north and two towards the warm range edge to the south. The ninth population was in southern Namibia, representing a recent invasion event first detected in 2014. Across the species' South African range, the distribution of its abundance was generally consistent with the ACH, with the greatest abundance at its range centre and a gradual decrease towards the range edges. However, the ultimate marginal population at both its cold and warm range edges showed moderate upticks in abundance compared to the penultimate marginal populations. Additionally, marginal populations in South Africa typically included a greater proportion of large individuals. Recruitment intensity was greater in warm range edge populations than cold range edge populations. The size structure of the population in Namibia resembled those of central populations in South Africa. Moderate increases in densities at the absolute range limits suggest that the species is currently undergoing spread into regions associated with moderately optimal environmental conditions (ultimate range edge sites) after encountering regions associated with suboptimal environmental conditions (penultimate range edge sites).     

High levels of genetic diversity in marginal populations of the marsh orchid Dactylorhiza majalis subsp. majalis

Because of harsh conditions, suboptimal habitat quality and poor connectivity to other populations, plant populations at the margin of a distribution are expected to be less genetically diverse, but to be more divergent from each other than populations in the centre of a distribution. In northern Europe, northern marginal populations may also be younger than populations further to the south, and may have had less time to accumulate genetic diversity by mutation and gene flow. However, orchids have very small seeds, which are easily dispersed long distances by wind, and orchids are therefore expected to show less differentiation between marginal and central populations than other groups of seed plants. Here, we analysed whether Scandinavian populations of the tetraploid marsh orchid Dactylorhiza majalis subsp. majalis differ from central European populations in genetic diversity patterns. A total of 220 plants from eight central European and ten Scandinavian populations was examined for variation at five nuclear microsatellite loci, nuclear ITS and 13 polymorphic sites in noncoding regions of the plastid genome. The total genetic diversity was slightly lower in Scandinavia than in central Europe, both in plastid and nuclear markers, but the differences were small. Also, the Scandinavian populations were less diverse and somewhat more strongly differentiated from each other than the central European ones. Dactylorhiza majalis subsp. majalis has apparently colonized Scandinavia on multiple independent occasions and from different source areas in the south. Seed flow between Scandinavian populations has still not fully erased the patterns imprinted by early colonization. Our results suggest that marginal populations of orchids may be as important as central ones in preserving genetic diversity through Pleistocene glacial cycles. We also predict that orchids with their light seeds are better adapted than many other plants to respond to future climate changes by dispersing into new suitable areas.     

Factors controlling the population dynamics of the clonal helophyte Ranunculus lingua

Abstract. Two marginal and two central populations of the pseudo-annual aquatic plant Ranunculus lingua were studied over four years. The main purpose was to quantify potentially influential abiotic and biotic factors and to derive predictions about life-history differences between the populations. Variation in abundance and height of R. lingua ramets at different depths were related to water-level fluctuations, to abundance of other helophyes (emergent macrophytes), and to the occurrence of invertebrate grazing and fungal pathogens. Clear differences between marginal and central populations were shown in the depth distribution of ramet numbers and ramet heights, as well as in the dynamic patterns, where marginal populations had a higher flux of ramets. These patterns and regression analyses indicated that abiotic factors have a greater influence in marginal populations, whereas biotic factors are more important in central populations. It is suggested that marginal habitats for R. lingua would favour life-histories with a high reproductive capacity, whereas a large size of ramet would be the most important life-history feature in central habitats. This was supported by the fact that ramets in marginal populations, in spite of their smaller size, produced higher number of rhizomes than ramets in central populations. Variation in regional abundance was finally related to differences in demographic processes and dispersal potential between the populations.     

植物边缘种群遗传多样性研究进展

边缘种群指地理分布边缘可检测到的一定数量的同种个体集合, 准确评价其遗传多样性对于理解第四纪冰期后气候变化对物种边缘扩展或收缩、遗传资源保护与利用以及物种形成等有重要意义。该文探讨了维持植物边缘种群遗传多样性的进化机制, 分析交配系统对物种边缘及其遗传多样性的影响, 比较了边缘与中心种群遗传多样性的差异及其形成的生态与进化过程, 并探讨了边缘种群遗传多样性与其所在的群落物种多样性的关系及理论基础。该文提出今后研究的重点是应用全基因组序列或转录组基因序列研究前缘-后缘种群之间或边缘-中心种群之间的适应性差异, 边缘种群与所在群落其他物种之间相互作用的分子机制, 深入解析边缘种群对环境的适应及边缘种群遗传多样性与群落物种多样性关系的生态与进化过程。     

Subdivision of S-phase and its use for comparative purposes in cultured human cells

Intranuclear DNA synthesis and concomitant chromosome duplication occur during a discrete period of the cell cycle termed S-phase. Using replication-banding and serial time sampling in asynchronous cell populations, it is possible to subdivide the S-phase into four or five chronological compartments termed "subphases". This paper discusses methods for analysing the sampling data to obtain the average duration of these subphases and the positions within S of the borders between them. Such information not only allows a more detailed analysis of the cell cycle, but also provides parameters which can be used for rigorous comparisons of cell populations from different sources and experimental conditions. Examples are given of application of the method to normal and chromosomally abnormal primary human fibroblasts and lymphocytes growing in short-term in vitro culture.     

Range-wide genetic structure in a north-east Asian spruce (Picea jezoensis) determined using nuclear microsatellite markers

Aim We used microsatellite markers to determine the range‐wide genetic structure of Picea jezoensis and to test the hypothesis that the past population history of this widespread cold‐temperate spruce has resulted in a low level of genetic variation and in imprints of inbreeding and bottlenecks in isolated marginal populations. Location The natural range of the three infraspecific taxa of P. jezoensis throughout north‐east Asia, including isolated marginal populations. Methods We analysed a total of 990 individuals across 33 natural populations using four nuclear microsatellite loci. Population genetic structure was assessed by analysing genetic diversity indices for each population, examining clustering (model‐based and distance‐based) among populations, evaluating signals of recent bottlenecks, and testing for isolation by distance (IBD). Results The 33 populations were clustered into five groups. The isolated marginal groups of populations (in Kamchatka, Kii in Japan and South Korea) exhibited low levels of allelic richness and gene diversity and a complete or almost complete loss of rare alleles. A recent bottleneck was detected in the populations in Hokkaido across to mid‐Sakhalin. The IBD analysis revealed that genetic divergence between populations was higher for populations separated by straits. Main conclusions Picea jezoensis showed a higher level of genetic differentiation among populations (F_ST = 0.101) than that observed in the genus Picea in general. This might be attributable to the fact that historically the straits around Japan acted as barriers to the movement of seeds and pollen. The low levels of genetic diversity in the isolated marginal population groups may reflect genetic drift that has occurred after isolation. Evidence of a significant bottleneck between the Hokkaido and mid‐Sakhalin populations implies that the cold, dry climate in the late Pleistocene resulted in the decline and contraction of populations, and that there was a subsequent expansion followed by a founder effect when conditions improved. The high polymorphism observed in P. jezoensis nuclear microsatellites revealed cryptic genetic structure that organellar DNA markers failed to identify in a previous study.