Seasonal variation in light utilisation,biomass production and nutrient removal by wastewater microalgae in a full-scale high-rate algal pond

There has been renewed interest in the combined use of high-rate algal ponds (HRAP) for wastewater treatment and biofuel production. Successful wastewater treatment requires year-round efficient nutrient removal while high microalgal biomass yields are required to make biofuel production cost-effective. This paper investigates the year-round performance of microalgae in a 5-ha demonstration HRAP system treating primary settled wastewater in Christchurch, New Zealand. Microalgal performance was measured in terms of biomass production, nutrient removal efficiency, light absorption and photosynthetic potential on seasonal timescales. Retention time-corrected microalgal biomass (chlorophyll a) varied seasonally, being lowest in autumn and winter (287 and 364 mg m^?3day^?1, respectively) and highest in summer (703 mg m^?3day^?1), while the conversion efficiency of light to biomass was greatest in winter (0.39 mg Chl- a per μmol) and lowest in early summer (0.08 mg Chl- a per μmol). The percentage of ammonium (NH₄–N) removed was highest in spring (79 %) and summer (77 %) and lowest in autumn (47 %) and winter (53 %), while the efficiency of NH₄–N removal per unit biomass was highest in autumn and summer and lowest in winter and spring. Chlorophyll-specific light absorption per unit biomass decreased as total chlorophyll increased, partially due to the package effect, particularly in summer. The proportional increase in the maximum electron transport rate from winter to summer was significantly lower than the proportional increase in the mean light intensity of the water column. We concluded that microalgal growth and nutrient assimilation was constrained in spring and summer and carbon limitation may be the likely cause.     

Response of coastal phytoplankton to ammonium and nitrate pulses: seasonal variations of nitrogen uptake and regeneration

Seasonal variation in uptake and regeneration of ammonium and nitrate in a coastal lagoon was studied using ¹⁵N incorporation in particulate matter and by measuring changes in particulate nitrogen. Uptake and regeneration rates were two orders of magnitude lower in winter than in summer. Summer uptake values were 2.8 and 2.2 mol N.l^–1.d^–1 for ammonium and nitrate, respectively. Regeneration rates were 2.9 and 2.1 mol N.l^–1.d^–1 for ammonium and nitrate respectively. Regeneration/uptake ratios were often below one, indicating that water column processes were not sufficient to satisfy the phytoplankton nitrogen demand. This implies a role of other sources of nitrogen, such as macrofauna (oysters and epibionts) and sediment. Phytoplankton was well adapted to the seasonal variations in resources, with mixotrophic dinoflagellates dominant in winter, and fast growing diatoms in summer. In winter and spring, ammonium was clearly preferred to nitrate as a nitrogen source, but nitrate was an important nitrogen source in summer because of high nitrification rates. Despite low nutrient levels, the high rates of nitrogen regeneration in summer as well as the simultaneous uptake of nitrate and ammonium allow high phytoplankton growth rates which in turn enable high oyster production.     

Anammox bacterial populations in deep marine hypersaline gradient systems

To extend the knowledge of anaerobic ammonium oxidation (anammox) habitats, bacterial communities were examined in two hypersaline sulphidic basins in Eastern Mediterranean Sea. The 2 m thick seawater–brine haloclines of the deep anoxic hypersaline basins Bannock and L’Atalante were sampled in intervals of 10 cm with increasing salinity. ¹⁵N isotope pairing incubation experiments showed the production of ²⁹N₂ and ³⁰N₂ gases in the chemoclines, ranging from 6.0 to 9.2 % salinity of the L’Atalante basin. Potential anammox rates ranged from 2.52 to 49.65 nmol N₂ L^?1 day^?1 while denitrification was a major N₂ production pathway, accounting for more than 85.5 % of total N₂ production. Anammox-related 16S rRNA genes were detected along the L’Atalante and Bannock haloclines up to 24 % salinity, and the amplification of the hydrazine synthase genes (hzsA) further confirmed the presence of anammox bacteria in Bannock. Fluorescence in situ hybridisation and sequence analysis of 16S rRNA genes identified representatives of the marine anammox genus ‘Candidatus Scalindua’ and putatively new operational taxonomic units closely affiliated to sequences retrieved in marine environments that have documented anammox activity. ‘Scalindua brodae’ like sequences constituted up to 84.4 % of the sequences retrieved from Bannock. The anammox community in L’Atalante was different than in Bannock and was stratified according to salinity increase. This study putatively extends anammox bacterial habitats to extremely saline sulphidic ecosystems.     

Metabolic threshold and sulfide-buffering in diffusion controlled marine sediments impacted by continuous organic enrichment

The effects of organic enrichment on sediment biogeochemistry was studied in diffusion controlled sediment mesocosms, where labile organic matter (OM) (fish feed) pulses were added once a week to the sediment surface. Two types of sediments, differing mainly in content of reactive Fe, were used. The aim of this experiment was two-fold, (1) to evaluate the importance of Fe-driven sulfide buffering for sulfide accumulation in surface enriched sediments, and (2) to estimate the diagenetic capacity for degradation of labile OM near the sediment surface. The simulated OM loading rate of 375 mmol C m^?2 day^?1 led to a 5–6 times increase in CO₂-production and a 4–5 times increase in O₂-uptake. Sulfate reduction estimated by radiotracer experiments and CO₂-release was 105–131 mmol m^?2 day^?1, but accumulation of porewater sulfide was low in both sediment types. Instead 99% of sulfide was oxidized with O₂ at the sediment water interface in the low Fe treatment, whereas 46% of produced sulfide precipitated as Fe-S compound in the high Fe treatment resulting in significantly lower O₂-uptake. Furthermore, the accumulation of up to 30% of added OM by the end of the experiment indicated a saturation of the heterotrophic microbial communities in the upper enriched surface layer. These results suggest a maximum diagenetic capacity for OM degradation in the range of ~25 μmol C cm^?3 day^?1 or 260 mmol m^?2 day^?1 for the present sediment types.     

Phytoplankton blooms under dim and cold conditions in freshwater lakes of East Antarctica

The seasonal variations of limnological (water temperature, light availability, turbidity, and chlorophyll a concentration) parameters were recorded continuously from January 2004 to February 2005 at two freshwater lakes: Oyako-ike and Hotoke-ike, Sôya Coast, East Antarctica. Water was in a liquid phase throughout the year, with temperatures ranging from 0 to 10°C. The maximum photosynthetically active radiation in Lake Oyako-ike was 23.16 mol m^?2 day^?1 (at 3.8 m) and Hotoke-ike was 53.01 mol m^?2 day^?1 (at 2.2 m) in summer, and chlorophyll a concentration ranged from ca. 0.5 to 2.5 μg L^?1 (Oyako-ike) and from ca. 0.1 to 0.8 μg L^?1 (Hotoke-ike) during the study period. Increase in chlorophyll a fluorescence occurred under dim-light conditions when the lakes were covered with ice in spring and autumn, but the signals were minimum in ice-free summer in both the lakes. During spring and summer, as a result of decreasing snow cover, the chlorophyll a concentration similarly decreased when PAR was relatively high, following periods of heavy winds. The autumnal and spring increase occurred under different PAR levels (ca. 20-fold and 90-fold stronger, respectively, in autumn in both the lakes). Differences in the autumn and spring increases suggest that the spring algal community is more shade-adapted than the autumn algal community. Antarctic phytoplankton appears especially adapted to low-light levels and inhibited by strong light regimes.     

Influence of hydrological connectivity of riverine wetlands on nitrogen removal via denitrification

Wetland ecosystems in agricultural areas often become progressively more isolated from main water bodies. Stagnation favors the accumulation of organic matter as the supply of electron acceptors with water renewal is limited. In this context it is expected that nitrogen recycling prevails over nitrogen dissipation. To test this hypothesis, denitrification rates, fluxes of dissolved oxygen (SOD), inorganic carbon (DIC) and nitrogen and sediment features were measured in winter and summer 2007 on 22 shallow riverine wetlands in the Po River Plain (Northern Italy). Fluxes were determined from incubations of intact cores by measurement of concentration changes or isotope pairing in the case of denitrification. Sampled sites were eutrophic to hypertrophic; 10 were connected and 12 were isolated from the adjacent rivers, resulting in large differences in nitrate concentrations in the water column (from <5 to 1,133 μM). Benthic metabolism and denitrification rates were investigated by two overarching factors: season and hydrological connectivity. SOD and DIC fluxes resulted in respiratory quotients greater than one at most sampling sites. Sediment respiration was coupled to both ammonium efflux, which increased from winter to summer, and nitrate consumption, with higher rates in river-connected wetlands. Denitrification rates measured in river-connected wetlands (35–1,888 μmol N m^?2 h^?1) were up to two orders of magnitude higher than rates measured in isolated wetlands (2–231 μmol N m^?2 h^?1), suggesting a strong regulation of the process by nitrate availability. These rates were also significantly higher in summer (9–1,888 μmol N m^?2 h^?1) than in winter (2–365 μmol N m^?2 h^?1). Denitrification supported by water column nitrate (D_W) accounted for 60–100% of total denitrification (Dtot); denitrification coupled to nitrification (D_N) was probably controlled by limited oxygen availability within sediments. Denitrification efficiency, calculated as the ratio between N removal via denitrification and N regeneration, and the relative role of denitrification for organic matter oxidation, were high in connected wetlands but not in isolated sites. This study confirms the importance of restoring hydraulic connectivity of riverine wetlands for the maintenance of important biogeochemical functions such as nitrogen removal via denitrification.     

Seasonal and geomorphic controls on N and P removal in riparian zones of the US Midwest

Riparian zones are an important strategy to mitigate N and P export to streams. However, their efficiency with respect to nitrate (NO₃ ^?), ammonium (NH₄ ⁺), or soluble reactive phosphorus (SRP) in groundwater remains uncertain in the US Midwest. This study investigates water table fluctuations and NO₃ ^?, NH₄ ⁺, and SRP concentration dynamics in two riparian zone types (outwash vs. glacial till) common in the upper US Midwest. During low water table periods, NO₃ ^? removal was 93 % at WR (outwash site), and 75 % at LWD (glacial till site); but during high water table periods, NO₃ ^? removal efficiencies dropped to 50 % at WR, and 14 % at LWD. Median seasonal mass fluxes of NO₃ ^? removed at WR (9.4–21.7 mg N day^?1 m^?1 of stream length) and LWD (0.4–1.9 mg N day^?1 m^?1) were small compared to other riparian zones in glaciated landscapes. The WR site was a small SRP sink (0.114 and 0.118 mg day^?1 m^?1 during the dry period and wet period, respectively), while LWD acted as a small SRP source to the stream (0.004 mg day^?1 m^?1 during the dry period; 0.075 mg day^?1 m^?1 during the wet period). Both LWD and WR acted as sources of NH₄ ⁺ to the stream with mass fluxes ranging from 0.17 to 7.75 mg N day^?1 m^?1. Although riparian zones in the US Midwest provide many ecosystem services, results suggest they are unlikely to efficiently mitigate N and P pollution in subsurface flow.     

Primary production of aquatic macrophytes and their epiphytes in two shallow lakes (Peipsi and Võrtsjärv) in Estonia

In shallow lakes with large littoral zones, epiphytes and submerged macrophytes can make an important contribution to the total annual primary production. We investigated the primary production (PP) of phytoplankton, submerged macrophytes, and their epiphytes, from June to August 2005, in two large shallow lakes. The production of pelagic and littoral phytoplankton and of the dominant submerged macrophytes in the littoral zone (Potamogeton perfoliatus in Lake Peipsi and P. perfoliatus and Myriopyllum spicatum in Lake Võrtsjärv) and of their epiphytes was measured using a modified ¹⁴C method. The total PP of the submerged macrophyte area was similar in both lakes: 12.4 g C m^?2 day^?1 in Peipsi and 12.0 g C m^?2 day^?1 in Võrtsjärv. In Peipsi, 84.2% of this production was accounted for by macrophytes, while the shares of phytoplankton and epiphytes were low (15.6 and 0.16%, respectively). In Võrtsjärv, macrophytes contributed 58%, phytoplankton 41.9% and epiphytes 0.1% of the PP in the submerged macrophyte area. Epiphyte production in both lakes was very low in comparison with that of phytoplankton and macrophytes: 0.01, 5.04, and 6.97 g C m^?2 day^?1, respectively, in Võrtsjärv, and 0.02, 1.93, and 10.5 g C m^?2 day^?1, respectively, in Peipsi. The PP of the littoral area contributed 10% of the total summer PP of Lake Peipsi sensu stricto and 35.5% of the total summer PP of Lake Võrtsjärv.     

Remediation of Nitrogen-Contaminated Sediment Using Bioreactive,Thin-layer Capping with Biozeolite

In situ amendment of nitrogen-contaminated sediment using bioreactive, thin-layer capping (BTC) with biozeolite (i.e., zeolite with heterotrophic nitrifiers as well as aerobic denitrifiers attached) was studied herein. BTC with biozeolite for nitrogen-contaminated sediment management was evaluated through long-term (170 days) sediment incubation laboratory experiments. The results showed that BTC with relatively small dose rates (<10 kg m^?2) of biozeolite reduced the total nitrogen (TN) concentration in overlying water by over 90%, so it was effective in reducing the amount of N released from sediment. Higher-dose rates of biozeolite capping achieved an even higher removal efficiency. With the DO concentration of 1.5 ～ 6.5 mg L^?1 in overlying water, the reduction efficiency of TN in overlying water using BTC was higher than that less than 1 mg L^?1. In BTC systems, biological regeneration (i.e., heterotrophic nitrifiers attached to zeolite can regenerate the zeolite ion exchange capacity for ammonium) occurred in biozeolite which was saturated with ammonium during the nitrification period. In addition, TN contents in surface sediment in BTC systems were reduced at different levels after the experiment. These findings indicate that the BTC can be a feasible remedial approach to reduce N in overlying water and sediment in eutrophic water bodies. In the BTC, N load was reduced by the added biozeolite through adsorbing ammonium (NH₄⁺-N), converting NH₄⁺-N into nitrate nitrogen (NO₃^?-N) and nitrogen gas (N₂), and assimilating inorganic nitrogen.     

Long-term nutrient trends and harmful cyanobacterial bloom potential in hypertrophic Lake Taihu,China

Rapid economic development in China’s Lake Taihu basin during the past four decades has accelerated nitrogen (N) and phosphorus (P) loadings to the lake. This has caused a shift from mesotrophic to hypertrophic conditions, symptomized by harmful cyanobacterial blooms (CyanoHABs). The relationships between phytoplankton biomass as chlorophyll a (Chla) and nutrients as total nitrogen (TN) and total phosphorus (TP) were analyzed using historical data from 1992 to 2012 to link the response of CyanoHAB potential to long-term nutrient changes. Over the twenty year study period, annual mean Chla showed significantly positive correlations with both annual mean TN and TP (P < 0.001), reflecting a strong phytoplankton biomass response to changes in nutrient inputs to the lake. However, phytoplankton biomass responded slowly to annual changes in TN after 2002. There was not a well-defined or significant relationship between spring TN and summertime Chla. The loss of a significant fraction of spring N loading due to denitrification likely weakened this relationship. Bioavailability of both N and P during the summer plays a key role in sustaining cyanobacterial blooms. The frequency of occurrence of bloom level Chla (>20 μg L^?1) was compared to TN and TP to determine nutrient-bloom thresholds. A decline in bloom risk is expected if TN remains below 1.0 mg L^?1 and TP below 0.08 mg L^?1.     

Influence of root zone nitrogen management and a summer catch crop on cucumber yield and soil mineral nitrogen dynamics in intensive production systems

Nutrient and water management is crucially important in shallow-rooted vegetable production systems characterized by high input and high environmental risk. A 2-year field experiment on greenhouse cucumber double-cropping systems examined the effects of root zone nitrogen management and planting of sweet corn as a catch crop in the summer fallow period on cucumber yield and soil N_min dynamics compared to conventional practices. Cucumber fruit yields were not significantly affected by root zone N management and catch crop planting despite a decrease in N fertilizer application of 53% compared to conventional N management. Soil N_min content to a depth of 0.9 m decreased markedly and root zone (0–0.3 m) soil N_min content was maintained at about 200 kg N ha^?1. Root zone N management efficiently and directly reduced apparent N losses by 44% and 45% in 2005 and 2006, respectively. Sweet corn, the summer catch crop, depleted N_min residue in the soil profile of 1.8 m at harvest of winter–spring season cucumber by 304–333 kg N ha^?1, which contributed 19–22% reduction in N loss. Compared to conventional N management, N loss was reduced by 56% under root zone N management and catch crop planting.     

Soil nitrous oxide emissions from a typical semiarid temperate steppe in inner Mongolia: effects of mineral nitrogen fertilizer levels and forms

Nitrous oxide (N₂O) emissions can be significantly affected by the amounts and forms of nitrogen (N) available in soils, but the effect is highly dependent on local climate and soil conditions in specific ecosystem. To improve our understanding of the response of N₂O emissions to different N sources of fertilizer in a typical semiarid temperate steppe in Inner Mongolia, a 2-year field experiment was conducted to investigate the effects of high, medium and low N fertilizer levels (HN: 200 kg N?ha^-1y^-1, MN: 100 kg N ha^-1y^-1, and LN: 50 kg N ha^-1y^-1) respectively and N fertilizer forms (CAN: calcium ammonium nitrate, AS: ammonium sulphate and NS: sodium nitrate) on N₂O emissions using static closed chamber method. Our data showed that peak N₂O fluxes induced by N treatments were concentrated in short periods (2 to 3 weeks) after fertilization in summer and in soil thawing periods in early spring; there were similarly low N₂O fluxes from all treatments in the remaining seasons of the year. The three N levels increased annual N₂O emissions significantly (P?<?0.05) in the order of MN > HN > LN compared with the CK (control) treatment in year 1; in year 2, the elevation of annual N₂O emissions was significant (P?<?0.05) by HN and MN treatments but was insignificant by LN treatments (P?>?0.05). The three N forms also had strong effects on N₂O emissions. Significantly (P?<?0.05) higher annual N₂O emissions were observed in the soils of CAN and AS fertilizer treatments than in the soils of NS fertilizer treatments in both measured years, but the difference between CAN and AS was not significant (P?>?0.05). Annual N₂O emission factors (EF) ranged from 0.060 to 0.298% for different N fertilizer treatments in the two observed years, with an overall EF value of 0.125%. The EF values were by far less than the mean default EF proposed by the Intergovernmental Panel on Climate Change (IPCC).     

The contribution of the deep chlorophyll maximum to primary production in a seasonally stratified shelf sea, the North Sea

Results from extensive cruises in the years 2000 and 2001 throughout distinct ecohydrodynamic regions of the central and southern North Sea are presented and used to generate estimates of gross primary production and new production. An undulating CTD fitted with a fluorometer was towed over a distance of 12,000 kms. Fluorescence data were used to determine the chlorophyll distribution and derive estimates of phytoplankton biomass. These results were combined with estimates of primary production (new and regenerated) from experiments from one cruise in order to estimate gross production for a greater geographical extent. Results from repeat inter-annual transects showed that the strength of the thermocline and the associated deep chlorophyll maximum were variable. However, when the primary production was integrated over the 15–40 m depth, the variability between years was low. While the depth and strength of the deep chlorophyll maximum varied across the region, a deep chlorophyll maximum (DCM) is a consistent and widespread feature of this region at around 30 m depth. In 2001 the calculated average primary production rate in summer for the whole area surveyed was 0.91 g C m^?2 day^?1. This daily production equates to ~130 g C m^?2 for the summer stratified period. In the offshore stratified regions around the Dogger Bank and Eastern Central North Sea primary production of 64 g C m^?2 associated with the deep chlorophyll maximum (15–40 m) accounted for 60 % of total primary production during the summer stratified period (after the spring bloom). Approximately 66 % of new production in these areas occurred in the DCM. This study shows the extent of the DCM in the North Sea and demonstrates its importance in sustaining primary production after the spring bloom.     

Biomarker assessment of organic matter sources and degradation in Canadian High Arctic littoral sediments

This paper presents an uncomplicated approach to improve estimates of groundwater nutrient load to a marine embayment. A two-dimensional chemical profile of shallow groundwater was analysed in a sandy beach in three seasons (early summer, late summer and mid winter) and an adjusted estimate of groundwater nutrient discharge was derived that accounts for a complex biogeochemical environment and non-conservative behaviour of nutrients in the pre-discharge beach groundwater. The study was conducted at Cockburn Sound, Western Australia, where there has been significant groundwater contamination and associated marine ecological degradation. Losses in nitrogen and increases in phosphorus were observed along the discharge pathway beyond that expected from mixing with marine water, and the changes were attributed to chemically and biologically mediated reactions. A slow groundwater velocity (0.14–0.18 m day^?1), high organic carbon (TOC = 0.35–4.9 mmol l^?1, DOC = 0.28–4.6 mmol l^?1) and low to sub-oxic conditions (DO = 0.4–24% saturation) were deemed suitable for chemically and biologically mediated reactions to occur and subsequently alter regional estimates of groundwater nutrient concentration. Accounting for this environment, groundwater loads were calculated that were 1–2 orders of magnitude less than previous regional-based estimates: 0.4–13 kg NO _x ^?  day^?1, 0.2–24 kg NH₄ ⁺ day^?1 and 0.004–0.8 kg FRP day^?1. This paper applies knowledge of recent research and presents scope to marine managers or modellers to account for groundwater inputs to the marine environment.     

Bioremediation potential of Palmaria palmata and Chondrus crispus (Basin Head): effect of nitrate and ammonium ratio as nitrogen source on nutrient removal

Palmaria palmata and Chondrus crispus were grown for 4 weeks in 1-L flasks at 10 °C to evaluate nutrient uptake and their potential application as nutrient biofilters in effluent from finfish culture. For greatest bioremediation benefit within an integrated system, we conclude that a seaweed biofilter using these species should be placed prior to bacterial biofiltration for exposure to greater proportions of ammonium than nitrate, though it is apparent that the productivity of both species is not influenced by the nitrogen source. Five combinations of ammonium– and nitrate–nitrogen were compared, each with a total N concentration of 300 μM (300:0, 270:30, 150:150, 30:270, 0:300). Molar nitrogen/phosphorus ratio was 10:1. The maximum growth rates were 8.9 and 6.0 % per day for P. palmata and C. crispus, respectively. For both species, the total nitrogen uptake was highest at 300 μM ammonium, 4.46 mgN gDW^?1 day^?1 for P. palmata and 3.40 mg?N? g?DW^?1?day^?1 for C. crispus. Over a 24-h period, 23–37 % of the available nitrate and 91–100 % of the available ammonium were taken up by P. palmata. In the same period, C. crispus took up 55–87 % of available nitrate and 89–100 % of ammonium. Tissue N in P. palmata was highest (4.1 %) at 270 and 300 μM ammonium, while the nitrogen source did not have a significant effect on the tissue N of C. crispus (mean of 4.6 %).     

Nutrient uptake and primary productivity in an urban estuary: using rate measurements to evaluate phytoplankton response to different hydrological and nutrient conditions

The northern San Francisco Estuary (nSFE) is an urban estuary supplied with anthropogenic nutrient inputs, yet spring blooms are uncommon and phytoplankton biomass is low. The low levels of chlorophyll (<5 µg L^?1) have likely contributed to declines in several native fishes, and there is a need to evaluate the conditions that could allow for increased phytoplankton. Increased ammonium (NH₄) loads have been hypothesized to modulate the magnitude of blooms in nSFE (the “NH₄ hypothesis”) as a result of inhibition of phytoplankton NO₃ uptake that limits access to the greater nitrogen (N) pool of nitrate (NO₃). This hypothesis, tested in enclosures, but not in the field until now, is that lack of access to NO₃ limits primary production and consequently the accumulation of chlorophyll. Here, we test this in the field with the following aims: (1) to observe the uptake response of phytoplankton in different flow and N loading conditions, (2) determine whether the sequence of uptake rates suggested by the “NH₄ hypothesis” occurs and (3) obtain depth-integrated nutrient uptake rates to better constrain published criteria for bloom formation. Weekly measurements of NH₄ and NO₃ uptake, and primary production rates were made during spring 2011–2012, along with nutrient and chlorophyll concentrations during two contrasting hydrological conditions of high vs low freshwater flow. In conditions with high freshwater flow (maximum of 2405 m³ s^?1), there were lower nutrient concentrations than with low/normal flows (e.g., NO₃ of 10 µmol L^?1 compared to 30 µmol L^?1), with low N uptake and primary production rates. With low flow (maximum of 1304 m³ s^?1), there was elevated chlorophyll and blooms occurred, especially in shallow well-lit shoals where chlorophyll reached 60 µg L^?1. The higher levels of chlorophyll and primary productivity resulted from uptake of ambient NO₃ by phytoplankton, and f-ratios >0.5. This was enabled by phytoplankton uptake of NH₄ to below inhibitory levels, as proposed by the “NH₄ hypothesis.” The depth-integrated uptake rate data were used to refine a model that yields flow and nutrient concentration criteria necessary for bloom formation and confirmed that washout flows were the most useful predictor of blooms. Understanding the interaction of phytoplankton biomass with nutrient variability requires evaluating changes in C and N uptake rates and river flow. These dynamic changes are central to understanding why some urban estuaries have lower productivity than expected, and would be difficult to evaluate using biomass data alone. This study points to the importance of treating inorganic N separately as NH₄ and NO₃ rather than lumping together as DIN and to use rate process data as a mechanistic way to understand, predict and minimize cultural eutrophication impacts.     

Net sediment N2 fluxes in a southern New England estuary: variations in space and time

Over the past three decades, Narragansett Bay has undergone various ecological changes, including significant decreases in water column chlorophyll a concentrations, benthic oxygen uptake, and benthic nutrient regeneration rates. To add to this portrait of change, we measured the net flux of N₂ across the sediment–water interface over an annual cycle using the N₂/Ar technique at seven sites in the bay for comparison with measurements made decades ago. Net denitrification rates ranged from about 10–90 μmol N₂–N m^?2 h^?1 over the year. Denitrification rates were not significantly different among sites and had no clear correlation with temperature. Net nitrogen fixation (?5 to ?650 μmol N₂–N m^?2 h^?1) was measured at three sites and only observed in summer (June–August). Neither denitrification nor nitrogen fixation exhibited a consistent relationship with sediment oxygen demand or with fluxes of nitrite, nitrate, ammonium, total dissolved inorganic nitrogen, or dissolved inorganic phosphate across all stations. In contrast to the mid-bay historical site where denitrification rates have declined, denitrification rates in the Providence River Estuary have not changed significantly over the past 30 years.     

Variations of the nitrate isotopic composition in the St. Lawrence River caused by seasonal changes in atmospheric nitrogen inputs

We present 42 dual-isotope nitrate analyses of fresh water samples collected in the St. Lawrence River between June 2006 and July 2008. Measured δ¹⁵N–NO₃ ^? and δ¹⁸O–NO₃ ^? values correlate negatively, while δ¹⁸O–NO₃ ^? displays no negative correlation with nitrate concentration. This suggests that nitrate uptake and/or elimination by denitrification is not the main driver of observed variations in nitrate concentration and isotopic signature in the St. Lawrence River. In addition, δ¹⁸O–NO₃ ^? is negatively correlated with the seasonally variable δ¹⁸O of ambient water, indicating that the variation in the isotopic signature of nitrate is barely modulated by in-stream nitrate regeneration (nitrification). It rather is constrained by along-river changes in the external sources of nitrate. Given the distinct nitrogen (N) and oxygen (O) isotopic signature of atmospheric nitrate, we argue that observed seasonal variations of δ¹⁵N–NO₃ ^? and δ¹⁸O–NO₃ ^? in the St. Lawrence River are due to variable contributions of snowmelt-derived water. Based on a N and O isotope mass balance, we show that total nitrate loading in the St. Lawrence River is dominated by a N input from the Great Lakes (47 ± 28 %) and from nitrate regeneration of both internal and external N (48 ± 22 %). While temporal nitrate N and O isotope dynamics in the St. Lawrence River are mainly influenced by the atmospheric N input fluctuations, with an increase in atmospheric loading during spring, atmospheric N plays overall a rather insignificant role with regards to the N budget (5 ± 4 %).     

Complex nitrogen cycling in the sponge Geodia barretti

Marine sponges constitute major parts of coral reefs and deep‐water communities. They often harbour high amounts of phylogenetically and physiologically diverse microbes, which are so far poorly characterized. Many of these sponges regulate their internal oxygen concentration by modulating their ventilation behaviour providing a suitable habitat for both aerobic and anaerobic microbes. In the present study, both aerobic (nitrification) and anaerobic (denitrification, anammox) microbial processes of the nitrogen cycle were quantified in the sponge Geodia barretti and possible involved microbes were identified by molecular techniques. Nitrification rates of 566 nmol N cm^?3 sponge day^?1 were obtained when monitoring the production of nitrite and nitrate. In support of this finding, ammonia‐oxidizing Archaea (crenarchaeotes) were found by amplification of the amoA gene, and nitrite‐oxidizing bacteria of the genus Nitrospira were detected based on rRNA gene analyses. Incubation experiments with stable isotopes (¹⁵NO₃^‐ and ¹⁵NH₄⁺) revealed denitrification and anaerobic ammonium oxidation (anammox) rates of 92 nmol N cm^?3 sponge day^?1 and 3 nmol N cm^?3 sponge day^?1 respectively. Accordingly, sequences closely related to ‘Candidatus Scalindua sorokinii’ and ‘Candidatus Scalindua brodae’ were detected in 16S rRNA gene libraries. The amplification of the nirS gene revealed the presence of denitrifiers, likely belonging to the Betaproteobacteria. This is the first proof of anammox and denitrification in the same animal host, and the first proof of anammox and denitrification in sponges. The close and complex interactions of aerobic, anaerobic, autotrophic and heterotrophic microbial processes are fuelled by metabolic waste products of the sponge host, and enable efficient utilization and recirculation of nutrients within the sponge–microbe system. Since denitrification and anammox remove inorganic nitrogen from the environment, sponges may function as so far unrecognized nitrogen sinks in the ocean. In certain marine environments with high sponge cover, sponge‐mediated nitrogen mineralization processes might even be more important than sediment processes.     

Carbon dioxide and methane emissions from interfluvial wetlands in the upper Negro River basin, Brazil

Extensive interfluvial wetlands occur in the upper Negro River basin (Brazil) and contain a mosaic of vegetation dominated by emergent grasses and sedges with patches of shrubs and palms. To characterize the release of carbon dioxide and methane from these habitats, diffusive and ebullitive emissions and transport through plant aerenchyma were measured monthly during 2005 in permanently and seasonally flooded areas. CO₂ emissions averaged 2193 mg C m^?2 day^?1. Methane was consumed in unflooded environments and emitted in flooded environments with average values of ?4.8 and 60 mg C m^?2 day^?1, respectively. Bubbles were emitted primarily during falling water periods when hydrostatic pressure at the sediment?Cwater interface declined. CO₂ and CH₄ emissions increased when dissolved O₂ decreased and vegetation was more abundant. Total area and seasonally varying flooded areas for two wetlands, located north and south of the Negro River, were determined through analysis of synthetic aperture radar and optical remotely sensed data. The combined areas of these two wetlands (3000 km²) emitted 1147 Gg C year^?1 as CO₂ and 31 Gg C year^?1 as CH₄. If these rates are extrapolated to the area occupied by hydromorphic soils in the upper Negro basin, 63 Tg C year^?1 of CO₂ and 1.7 Tg C year^?1 as CH₄ are estimated as the regional evasion to the atmosphere.