A Mathematical Model of CR3/TLR2 Crosstalk in the Context of Francisella tularensis Infection

Complement Receptor 3 (CR3) and Toll-like Receptor 2 (TLR2) are pattern recognition receptors expressed on the surface of human macrophages. Although these receptors are essential components for recognition by the innate immune system, pathogen coordinated crosstalk between them can suppress the production of protective cytokines and promote infection. Recognition of the virulent Schu S4 strain of the intracellular pathogen Francisella tularensis by host macrophages involves CR3/TLR2 crosstalk. Although experimental data provide evidence that Lyn kinase and PI3K are essential components of the CR3 pathway that influences TLR2 activity, additional responsible upstream signaling components remain unknown. In this paper we construct a mathematical model of CR3 and TLR2 signaling in response to F. tularensis. After demonstrating that the model is consistent with experimental results we perform numerical simulations to evaluate the contributions that Akt and Ras-GAP make to ERK inhibition. The model confirms that phagocytosis-associated changes in the composition of the cell membrane can inhibit ERK activity and predicts that Akt and Ras-GAP synergize to inhibit ERK.     

Studies on Carboxymethyl Cellulase and Xylanase Activities of Anaerobic Fungal Isolate CR4 from the Bovine Rumen

An anaerobic fungal isolate, CR4, was isolated from the bovine rumen. The DNA sequence of internal transcribed spacer region 1 showed that CR4 belonged to the genus Caecocmyces. The dry matter digestibility of timothy hay by anaerobic fungal isolate CR4 was determined. The effects of carbohydrate growth substrates on carboxymethyl cellulase (CMCase) and xylanase activities also were examined. The extent of dry matter digestibility of timothy hay was 31% at 6 days’ incubation. The highest specific activity of CMCase in the culture supernatant (SN) fraction was observed in xylose culture. The activity of CMCase was not detected in the SN fraction of cellobiose and xylan or in the cell-bound fraction of all growth substrates. The highest specific activity of xylanase in the SN fraction was observed in glucose culture. These results suggest that fiber-degrading enzyme activities were affected by growth substrates and that CR4 is xylanolytic. Zymogram analysis showed that CR4 produces three CMCases of molecular mass (95, 89, and 64 kDa) and three xylanases of molecular mass (82, 73, and 66 kDa). This is the first demonstration showing the molecular mass of fiber-degrading enzymes of Caecomyces.     

Microbial Diversity at Iron-Clay Interfaces after 10 Years of Interaction Inside a Deep Argillite Geological Formation (Tournemire,France)

In the context of a geological disposal of radioactive waste in clayey formations, the consequences of microbial activity are of concern regarding the corrosion of metallic components. The purpose of the present work was to characterize the microbial diversity that may have impacted corrosion processes at the interface between re-compacted argillite and steel coupons after 10 years of interaction inside the Toarcian argillite layer in Tournemire (France) under in situ conditions. Several types of steel coupons were introduced in 1999 in two boreholes (so-called CR6 and CR8) drilled in the geological formation and filled with re-compacted argillite. CR6 borehole was drilled horizontally from a century-old railway tunnel and coupons were placed in the undisturbed argillite. CR8 borehole was drilled vertically under the tunnel, in conditions influenced by the draining of the Cernon fault water. CR6 and CR8 boreholes were overcored 10 years later and steel coupons as well as re-compacted argillite samples were analyzed separately. The characterization of their microbial diversity was carried out using culture media and molecular methods using 16S rRNA genes cloning. Data resulting from both approaches were complementary. Isolates and clone sequences were affiliated to only 3 bacterial phyla: Firmicutes, Actinobacteria and Proteobacteria. The biodiversities differed depending on the steel type and the borehole considered, indicating the influence of both iron-clay interactions and in situ environmental conditions. This analysis has highlighted the presence of sulphate-reducing bacteria, iron-reducing bacteria and isolates capable to develop at high temperatures. These microorganisms can grow at the interfaces between materials in a very short period of time compared with planned durations of disposal. Thus, these results should be considered to assess the consequences of microbial activities on the evolution of the metallic components like overpacks.     

Effect of selective media on loss of congo red binding inShigella flexneri

Summary The effect of growth ofShigella flexneri on various selective media on retention of congo red (CR) binding ability was determined to evaluate the effectiveness of isolation techniques regarding maintenance of the virulence plasmid. WhenS. flexneri was surface-plated onto selective agars and the resulting colonies replica plated onto CR plates, no white colonies indicative of loss of virulence were found despite repeated trials. However, whenS. flexneri was grown in liquid media (agar was removed from agar-containing media by centrifugation), white colonies were found upon plating onto CR plates. Most common selective media for shigellae produced fewer than 5–10 white colonies/1000 red colonies. However, growth in broth prepared from violet red bile agar, desoxycholate citrate agar, and SS agar gave more than 100 white colonies/1000 red colonies. Loss of CR binding was demonstrated whenS. flexneri was grown in broth containing tergitol 7, sodium dodecyl sulfate, bile salts #3, crystal violet, eosin y or methylen blue. However, concentrations of selective agents that led to loss of CR binding were much higher than those used in selective media. Results indicate that under usual conditions of isolation ofS. flexneri from food and clinical specimens, CR binding appears to be a relatively stable character with most selective media; however, use of violet red bile agar, desoxycholate citrate agar, and SS agar may lead to substantial loss of congo red binding indicating that the isolates may not be virulent.     

枯草芽孢杆菌肥在罗汉果上应用的效应分析

以罗汉果永青2号品种为材料,在连作6 a罗汉果的地块上,用地膜覆盖和区间隔离的方法,施入不同浓度的枯草芽孢杆菌肥,观察土壤微生物数量、罗汉果叶绿素量、白绢病发生率、产量及皂苷Ⅴ的变化,研究枯草芽孢杆菌肥对多年种植罗汉果地块的土壤微生物,植株生长和品质的影响。结果表明:枯草芽孢杆菌肥明显提高0~20 cm土壤微生物的数量,尤其是细菌数量和放线菌明显高于对照;而引发植株发病的真菌数量显著减少,最多能减少13.8%。提高罗汉果植株叶片叶绿素含量,促进叶绿素a、叶绿素b的形成,有利光合作用积累,同时,能增加叶绿素c含量,提高植株抗逆性;能抑制或降低白绢病病菌感染,减少白绢病发生。罗汉果果实产量得到明显提高,最大提高17.5%,同时,大中果比率提高7.5%,优化了罗汉果商品的物理性状;能改善罗汉果品质,提高其内含物的含量,果实中的主效成份皂苷Ⅴ含量达到1.33%,显著高于对照。该研究结果为罗汉果产区使用枯草芽孢杆菌肥连续种植罗汉果提供了依据。     

Application of Chaos Theory in Analyzing the Cardiac Rhythm in Healthy Subjects at Different Sleep Stages

The changes in the chaotic element of the cardiac rhythm (CR) were quantitated at different sleep stages by calculating the correlation dimension (D2) in 26 healthy subjects of both sexes (mean age 29.2 years), including 7 trained and 19 untrained subjects. Three untrained subjects took part in tests with autonomic nervous system blockers (atropine and propranolol). The study demonstrated a correlation between the changes in D2 at different sleep stages and the level of the autonomic regulation of CR. As the influence of the parasympathetic system on CR increased from one stage of slow wave sleep to another, D2 increased; during rapid eye movement (REM) sleep, this influence weakened and D2 decreased. The character of changes differed in the trained and untrained subjects and depended on the initial level of the autonomic regulation of CR. In the trained subjects, characterized by predominance of the parasympathetic regulation of CR, the initial and subsequent D2 values were higher than in the untrained subjects. Both during wakefulness and at all stages of sleep, D2 increased when the sympathetic regulation of CR was blocked, decreased when the parasympathetic regulation was blocked, and reached the lowest level when both of them were blocked. This showed that the chaotic element of CR, expressed numerically by D2, depends on the regulating effects of the autonomic nervous system.     

The effect of calorie restriction on growth and development in silkworm,Bombyx mori

Caloric restriction (CR) is known to extend the life span in different species from yeast to mammals. In this report, a simple organism silkworm (Bombyx mori) was used to study the effect of moderate CR on the growth and development processes of insects. Here we show that an extension of life span upon moderate CR was observed in the silkworm. The total protein level in the 5th instar larvae hemolymph appeared to decline significantly under CR. SDS‐PAGE analysis showed that the influence of CR was sex‐dependent. The CR effects on female animals were much more significant than on the males. The MALDI‐TOF MS study identified 16 proteins that expressed differentially among six groups of the male or female larvae fed at different time frequencies. Four of them, storage protein 1 (SP1), arylphorin (SP2), imaginal disk growth factor (IDGF), and 30‐kDa lipoprotein, showed significant differences. It was demonstrated that these four proteins were up‐regulated when the larvae were over‐fed and down‐regulated when the larvae were less‐fed. © 2009 Wiley Periodicals, Inc.     

A re‐assessment of sucrose signaling involved in cluster‐root formation and function in phosphate‐deficient white lupin (Lupinus albus)

Apart from substrate functions, a signaling role of sucrose in root growth regulation is well established. This raised the question whether sucrose signals might also be involved in formation of cluster‐roots (CRs) under phosphate (Pi) limitation, mediating exudation of phosphorus (P)‐mobilizing root exudates, e.g. in Lupinus albus and members of the Proteaceae. Earlier studies demonstrated that CR formation in L. albus was mimicked to some extent by external application of high sucrose concentrations (25 mM) in the presence of extremely high P supply (1–10 mM), usually suppressing CR formation. In this study, we re‐addressed this question using an axenic hydroponic culture system with normal P supply (0.1 mM) and a range of sucrose applications (0.25–25 mM). The 2.5 mM sucrose concentration was comparable with internal sucrose levels in the zone of CR initiation in first‐order laterals of P‐deficient plants (3.4 mM) and induced the same CR morphology. Similar to earlier studies, high sucrose concentrations (25 mM) resulted in root thickening and inhibition of root elongation, associated with a 10‐fold increase of the internal sucrose level. The sucrose analog palatinose and a combination of glucose/fructose failed to stimulate CR formation under P‐sufficient conditions, demonstrating a signal function of sucrose and excluding osmotic or carbon source effects. In contrast to earlier findings, sucrose was able to induce CR formation but had no effect on CR functioning with respect to citrate exudation, in vitro activity and expression of genes encoding phosphoenolpyruvate carboxylase, secretory acid phosphatase and MATE transporters, mediating P‐mobilizing functions of CRs.     

干旱胁迫对蒙古黄芪生长及根部次生代谢物含量的影响

以山西道地药材黄芪一年生幼苗为试验材料,设置常规水分条件(CK)、轻度干旱胁迫(A1)、中度干旱胁迫(A2)、重度干旱胁迫(A3)4个不同处理,研究土壤干旱胁迫对黄芪生长及生理的影响。结果表明:黄芪茎叶快速生长集中在出苗后80—120d,以后生长减缓;当茎叶枯萎时,根中生物量短期快速积累。与常规水分条件相比,干旱胁迫处理显著降低了黄芪苗高及茎叶生物量,但对抗氧化能力、根系生长及次生代谢物积累产生了不同的影响。轻度干旱胁迫下SOD、POD、CAT 3种抗氧化酶活性升高,丙二醛(MDA)含量和细胞膜透性降低,同时根长与根生物量增加、多糖与皂苷两种次生代谢物积累增多,黄芪药材的质量得到显著提高(P0.05);胁迫上升到中度、重度时,SOD酶活性逐渐降低,重度胁迫下低于对照,而POD及CAT酶活性、MDA含量、细胞膜透性均随胁迫增强而升高,相反,根长、根生物量、多糖与皂苷含量降低,导致黄芪药材的质量显著降低(P0.01)。综上表明,干旱胁迫下,SOD酶表现较为敏感,可能在清除活性氧中起主要作用;轻度水分胁迫能有效启动黄芪体内抗氧化酶系统和次生代谢,它们相互协作共同对抗胁迫对细胞产生的伤害,通过降低地上部分的生长,将营养物质优先运往根部,促进根产量及药材质量的提高。这一结论,可在黄芪多糖和皂苷次生代谢物定向培育的水分管理中加以利用。     

种植模式对巴戟天生长的影响

为探讨种植模式对中药材巴戟天(Morinda officinalis)生长的影响,对两种种植模式下巴戟天生长性状进行了研究。结果表明,坡地连片种植基地(PLZ)的土壤有效矿质营养和有机质含量分别低于坡地围林种植基地(PWZ)的24%～28%和38%～43%,差异极显著(P 0.01)。PWZ种植3年的巴戟天茎、叶和肉质根形态指标均显著优于PLZ的(P 0.01);但随着栽培时间的延长,PLZ的巴戟天肉质根性状逐渐优于PWZ的,PLZ的6 a生巴戟天单株产量是PWZ的1.16～1.17倍;肉质根多糖、总黄酮和原花青素含量均显著高于PWZ的(P0.01),且有效成分含量均随种植时间的延长呈上升趋势(P0.01)。可见,巴戟天在PLZ模式下的肉质根质量好,入药更符合国家药典优品性状的要求。同时,建议合理增加肉桂围林种植基地的光照量,抑制藤苗生长,以提高巴戟天肉质根的产量和有效成分积累。     

Bioactive constituents and the molecular mechanism of Curcumae Rhizoma in the treatment of primary dysmenorrhea based on network pharmacology and molecular docking

BackgroundCurcumae Rhizoma (CR) has a clinical efficacy in activating blood circulation to dissipate blood stasis and has been used for the clinical treatment of qi stagnation and blood stasis (QSBS) primary dysmenorrhea for many years. However, its molecular mechanism is unknown.ObjectiveThe present study aimed to demonstrate the multicomponent, multitarget and multipathway regulatory molecular mechanisms of CR in the treatment of QSBS primary dysmenorrhea.MethodsObservations of pathological changes in uterine tissues and biochemical assays were used to confirm that a rat model was successfully established and that CR was effective in the treatment of QSBS primary dysmenorrhea. The main active components of CR in rat plasma were identified and screened by ultra-performance liquid chromatography-quadrupole/time-of-flight mass spectrometry (UPLC-Q/TOF-MS). The component-target-disease network and protein-protein interaction (PPI) network of CR were constructed by a network pharmacology approach. Then, we performed Gene Ontology (GO) functional enrichment analysis and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis. Molecular docking was adopted to verify the interactions between the core components and targets of CR to confirm the accuracy of the network pharmacology prediction results. Furthermore, we evaluated the bioactive constituents of CR and molecular mechanism of by which CR promote blood circulation and remove blood stasis via platelet tests in vivo and in vitro and Western blot analysis.ResultsThe results of HE staining and biochemical assays of PGF2α, TXB2 and Ca²⁺ showed that CR was effective in the treatment of QSBS primary dysmenorrhea. A total of 36 active components were identified in CR, and 329 common targets were obtained and used to construct the networks. Of these, 14 core components and 10 core targets of CR in the treatment of primary dysmenorrhea were identified. The GO and KEGG enrichment analyses revealed that the common targets were involved in multiple signaling pathways, including the calcium, cAMP, MAPK, and PI3K-Akt signaling pathways, as well as platelet activation, which is closely related to platelet aggregation. The molecular docking results showed that the 14 core components and 10 core targets could bind spontaneously. Two core targets (MAPK1 and CCR5) and 7 core components (Isoprocurcumenol, Curcumadione, Epiprocurcumenol, (+)-Curdione, Neocurdione, Procurcumenol, and 13-Hydroxygermacrone) were closely related to CR in the treatment of primary dysmenorrhea. Furthermore, the in vivo platelet test showed that CR clearly inhibited platelet aggregation. Five core components ((+)-Curdione, Neocurdione, Isoprocurcumenol, Curcumadione and Procurcumenol) obviously inhibited platelet aggregation in vitro. In addition, based on the relationships among the signaling pathways, we confirmed that CR can effectively inhibit the expression of MAPK and PI3K-Akt signaling pathway-related proteins and decrease the protein expression levels of ERK, JNK, MAPK, PI3K, AKT and CCR5, thereby inhibiting platelet aggregation.ConclusionThis study demonstrated the bioactive constituents and mechanisms of CR in promoting blood circulation and removing blood stasis and its multicomponent, multitarget and multipathway treatment characteristics in primary dysmenorrhea. The results provide theoretical evidence for the development and utilization of CR.     

Dimerization properties of the transmembrane domains of Arabidopsis CRINKLY4 receptor-like kinase and homologs

CRINKLY4 (CR4) is a plant serine–threonine receptor kinase. In Zea mays, CR4 functions in the differentiation of the leaf epidermis and the aleurone cell layer and, in Arabidopsis thaliana, the ortholog ACR4 is involved in the development of the integument and seed coat. The Arabidopsis genome also encodes four CR4-related proteins (CRR) whose functions are not known. Based on studies of animal receptor kinase proteins it is likely that the molecular basis of function of CR4 and related proteins is mediated by receptor dimerization. The importance of the transmembrane (TM) domain in the dimerization of several receptor kinases has been demonstrated by the TOXCAT system, a genetic assay that measures helix interactions in a natural membrane environment. In this study, we have used the TOXCAT assay to investigate the potential of the CR4 and CR4-related TM domains to homo-dimerize. Our investigation indicates that the CR4 TM domain and the CRR TM domains have higher propensities for homo-dimerization than the ACR4 TM domain. Interestingly, the dimerization potential of the ACR4 TM domain is significantly weaker even though 13 of 24 amino acids are identical to that of the CR4 TM domain. In order to determine the contributions of specific amino acids to the higher dimerization potential of CR4 compared to ACR4, mutations were made at specific sites in ACR4 TM domain and the strength of the dimer assessed by the TOXCAT assay. One mutation restored the activity to the CR4 level, while other mutations produced either no change or significantly increased the dimerization potential of the ACR4 TM domain. Our results indicate that the TM domains of CR4, ACR4 and the CRR receptor family of proteins have the intrinsic capacity to homo-dimerize, albeit with varying degrees of affinity.     

Caloric restriction increases brain mitochondrial calcium retention capacity and protects against excitotoxicity

Caloric restriction (CR) protects against many cerebral pathological conditions that are associated with excitotoxic damage and calcium overload, although the mechanisms are still poorly understood. Here we show that CR strongly protects against excitotoxic insults in vitro and in vivo in a manner associated with significant changes in mitochondrial function. CR increases electron transport chain activity, enhances antioxidant defenses, and favors mitochondrial calcium retention capacity in the brain. These changes are accompanied by a decrease in cyclophilin D activity and acetylation and an increase in Sirt3 expression. This suggests that Sirt3‐mediated deacetylation and inhibition of cyclophilin D in CR promote the inhibition of mitochondrial permeability transition, resulting in enhanced mitochondrial calcium retention. Altogether, our results indicate that enhanced mitochondrial calcium retention capacity underlies the beneficial effects of CR against excitotoxic conditions. This protection may explain the many beneficial effects of CR in the aging brain.     

不同生境自交植物黄花大苞姜生殖分配的研究

为了探讨自交植物黄花大苞姜(Caulokaempferia coenobialis)对石壁附生这一特殊生境的生态适应,对其不同物候期和不同生境的生殖分配进行了对比研究。结果表明,在生殖生长过程中,黄花大苞姜种群用于营养生长的生物量分配占有绝对优势,而用于生殖的生物量分配比例较小(<13%)。在黄花大苞姜各构件的生物量分配中,根茎和叶的比重较大(24.22%~43.25%)。在光线较弱生境中的种群,为了提高资源获取能力,黄花大苞姜分配到叶的比重明显高于光线较强的种群,而分配给根茎的比例却明显低于光线较强的种群。随着物候期的推移,黄花大苞姜生殖分配的比例不断增加,到果期达到最大值。不同种群间和年度间黄花大苞姜分配给生殖构件的比例没有显著差异,推测其生殖分配可能受遗传因素控制。个体大小与根茎生物量呈极显著线性函数同速生长,而与生殖分配在云天海种群没有表现出相关性,在上坪和天堂顶种群表现为同速生长关系,但决定系数小于40%。因此,黄花大苞姜能有效调节其在不同生境的生物量分配以适应石壁附生的特殊生境,在光线较弱的种群提高叶的生物量分配并降低根茎的生物量分配以提高资源的获取能力。整体上投资到营养构件的生物量占比高达87%以上,生殖构件在居群间和年度间均保持稳定。这种繁殖策略,一方面较高的营养构件投资可以获得更多的资源,另一方面稳定的生殖投资可以保证种群的延续,各构件相互协调以更好适应石壁这一资源匮乏的生境。     

Mechanisms leading to cortical reaction in the mammalian egg

Activation of the mammalian egg results in cortical reaction (CR), which is correlated with an increase in intracellular Ca²⁺ concentration and PKC activation. The CR is a gradual rather then an “all or none” response, and can be regulated by different concentrations of parthenogenetic activators. To evaluate the biological significance of parthenogenetic induced CR, rat eggs were fertilized or activated by different concentrations of ionomycin and TPA. Cortical granules (CG) were monitored by electron microscopy, while the CG exudate was visualized by Lens culinaris lectin and Texas Red, using light and confocal microscopy. The ability of the CR to trigger a full block to polyspermy was examined in an IVF system. Our study demonstrates the existence of light and dark CG, which differ by number, distribution in the egg cortex, and sensitivity to parthenogenetic activators. Sperm penetration or high concentration of activators, trigger depletion of both light and dark CG, leading to a full CR. Low concentration of activators altered the CG density, the ratio of dark/light CG, and induced partial CR that was sufficient to cause a block to polyspermy. The results imply that Ca²⁺ rise or PKC activation have different effects on light and dark CG. In recently fertilized or parthenogenetically activated eggs, CG exudate appeared as evenly distributed spots, whereas in more advanced stages of fertilization the exudate was scattered as patchy aggregates. This observation suggests a difference in the dispersion of CG exudate after fertilization as compared to parthenogenetic activation. Mol. Reprod. Dev. 51:295–303, 1998. © 1998 Wiley-Liss, Inc.     

Differential responses of the enzymes involved in proline biosynthesis and degradation in drought tolerant and sensitive cotton genotypes during drought stress and recovery

The relative water content (RWC), free proline levels and the activities of enzymes involved in proline metabolism were studied in drought tolerant (Ca/H 680) and drought sensitive (Ca/H 148) genotypes of cotton (Gossypium hirsutum L.) during induction of water stress and posterior recovery. Water stress caused a significant increase in proline levels and P5CS activity in leaves of both tolerant and sensitive genotypes, whereas the activity of P5CR increased minimally and the activity of OAT remains unchanged. The activity of PDH decreased under drought stress in both the genotypes. The leaf of tolerant genotype maintained higher RWC, photosynthetic activity and proline levels, as well as higher P5CS and P5CR activities under water stress than that of drought sensitive genotype. The drought induced proline levels and activities of P5CS and P5CR declined and tend to be equal to their respective controls, during recovery, whereas the PDH activity tends to increase. These results indicate that induction of proline levels by up regulation of P5CS and down regulation of PDH may be involved in the development of drought tolerance in cotton.     

The relationship between xylem differentiation and dormancy evolution in apricot flower buds (Prunus armeniaca L.): the influence of environmental conditions in two Mediterranean areas

Environmental and climatic conditions affect the flower bud growth, flowering and yield performance of fruit species. Temperature and water availability appear to be important factors for temperate fruit trees in mild climates. The aim of this research was to study the involvement of temperature regime on biological processes, such as xylem differentiation and dormancy evolution, in apricot flower buds (Prunus armeniaca L.). Over 3 consecutive years, biological and anatomical investigations were carried out in Tuscany (Italy) and Murcia (Spain) on two cultivars characterized by a different chilling requirement (CR): Currot, a traditional Spanish cultivar with a very low CR, and Stark Early Orange (SEO), a North American cultivar with a very high CR. Currot had a regular bearing, and was characterized by a synchronism between endodormancy release and xylem differentiation. On the other hand, SEO showed an irregular flower bud growth leading to flowering and fruit-set failure, even with a high level of chilling accumulation. No relationship was found in SEO between xylem development and flower bud growth reactivation. The de-synchronism between these processes could determine the poor adaptability to different environmental areas of SEO cultivar, and its very high CR is not the main hypothesised cause of the altered flower bud development.     

Calorie restriction modulates the transcription of genes related to stress response and longevity in human muscle: The CALERIE study

The lifespan extension induced by 40% caloric restriction (CR) in rodents is accompanied by postponement of disease, preservation of function, and increased stress resistance. Whether CR elicits the same physiological and molecular responses in humans remains mostly unexplored. In the CALERIE study, 12% CR for 2 years in healthy humans induced minor losses of muscle mass (leg lean mass) without changes of muscle strength, but mechanisms for muscle quality preservation remained unclear. We performed high-depth RNA-Seq (387–618 million paired reads) on human vastus lateralis muscle biopsies collected from the CALERIE participants at baseline, 12- and 24-month follow-up from the 90 CALERIE participants randomized to CR and “ad libitum” control. Using linear mixed effect model, we identified protein-coding genes and splicing variants whose expression was significantly changed in the CR group compared to controls, including genes related to proteostasis, circadian rhythm regulation, DNA repair, mitochondrial biogenesis, mRNA processing/splicing, FOXO3 metabolism, apoptosis, and inflammation. Changes in some of these biological pathways mediated part of the positive effect of CR on muscle quality. Differentially expressed splicing variants were associated with change in pathways shown to be affected by CR in model organisms. Two years of sustained CR in humans positively affected skeletal muscle quality, and impacted gene expression and splicing profiles of biological pathways affected by CR in model organisms, suggesting that attainable levels of CR in a lifestyle intervention can benefit muscle health in humans.     

镉污染条件下水稻对假单胞菌TCd-1微生物修复的生理响应

微生物在修复重金属污染土壤中发挥重要作用。为阐明假单胞菌TCd-1降低水稻镉吸收的机理,通过加镉土培盆栽试验,在10 mg/kg镉处理下,对比研究了接种菌株对2种镉耐性不同水稻品种(特优671、百香139)镉含量、根系活力、光合作用、抗氧化酶活性及抗氧化物质含量的影响。结果表明：与10 mg/kg镉处理相比,接种假单胞菌TCd-1后水稻“特优671”和“百香139”的根、茎、叶、糙米的镉含量分别依次降低了30.4%、39.1%、40.7%、29.2%和52.2%、51.7%、18.4%、38.8%;提高了2种水稻的根系活力、光合作用,促进了水稻的生长;“特优671”、“百香139”叶片的超氧化物歧化酶(Superoxide dismutase, SOD)活性分别提高了7.3%、138.5%,过氧化物酶(Peroxidase, POD)活性提高了82.0%、106.2%,过氧化氢酶(Catalase, CAT)活性提高了58.8%、172.7%;叶片的类黄酮含量提高了139.4%、73.6%,总酚含量提高了27.2%、23.1%;超氧阴离子含量降低了44.2%、29.0%,丙二醛(Mal...