Changes of nicotinamide coenzymes and adenylate energy charge in leaves of hybrid and parental tomato forms in anin vitro culture

Interrelation between dry matter in leaves and catabolic and anabolic activity in parental forms and F₁-hybrids ofLycopersicon esculentum Mill was investigated underin vitro culture. Heterosis in dry matter was observed in hybrids and similar values of adenylate energy charge (AEC) and the redox charge (RC), displaying balance between the systems generating energy and the processes associated with its consumption, were revealed. A higher recovery degree of NADP-NADPH system in comparison with NAD-NADH one, showing inutilization of recovery equivalents in the NADPH form in biosynthetic processes, was detected in the initial cultivars. The content of adenylate nucleotides, nicotinamide coenzymes and their changes might play a role in regulatory mechanisms of biomass accumulation in F₁-tomato hybrids and their parents.     

Hormonal regulation of energy metabolism in insects as a driving force for performance

Since all life processes depend on energy, the endocrine control of energy metabolism is one of the driving forces for the performance of an individual. Here, we review the literature on the key players in the endocrine regulation of energy homeostasis in insects, the adipokinetic hormones. These pleiotropic peptides not only control dynamic performance traits (flight, swimming, walking) but also regulatory performance traits (egg production, larval growth, and molting). Adipokinetic hormone is released into the hemolymph during intense muscular activity (flight) and also during apparently less energy-demanding locomotory activities, such as swimming and even walking, and, finally, activates the catabolic enzymes phosphorylase and/or triacylglycerol lipase that mobilize carbohydrates and/or lipids and proline, respectively. At the same time, anabolic processes such as the synthesis of protein, lipid, and glycogen are inhibited. Furthermore, adipokinetic hormones affect locomotory activity via neuromodulatory mechanisms that apparently employ biogenic amines. During oogenesis, it is thought that adipokinetic hormone performs similar tasks, because energetic substrates have to be mobilized and transported from the fat body to the ovaries in order to support oocyte growth. Inhibition of anabolic processes by exogenous adipokinetic hormone results in females that lay fewer and smaller eggs. Much less is known about the role of adipokinetic hormones during larval development and during molting but in this case energy homeostasis has to be tightly regulated as well: in general, during the early phase of a larval instar intake of food prevails and the energy stores of the fat body are established, whereas, prior to the molt, insects stop feeding and mobilize energy stores in the fat body, thereby fueling energy-demanding processes such as the formation of the new cuticle and the emergence from the old one. From the few data available to date, it is clear that adipokinetic hormones are involved in the regulation of these events in larvae.     

Energetic depression caused by mitochondrial dysfunction

Mitochondria not only provide most of the ATP needed for cell work and numerous specific anabolic and catabolic functions, they also contribute to Ca++ signalling and play a key role in the pathway to cell death. Impairment of mitochondrial functions caused by mutations of the mt-genome or by acute processes, is responsible for numerous diseases. Decreased concentrations of adenine nucleotides, leaky outer and inner mitochondrial membranes, and decreased activities of respiratory chain enzymes contribute to depression of cellular energy metabolism, one of the most important consequences of mitochondrial impairment as characterized by decreased cytosolic phosphorylation potentials.     

Interaction of creatine kinase and adenylate kinase systems in muscle cells

Elsewhere in this book the important role of creatine kinase and its metabolites in high energy phosphate metabolism and transport in muscle cells has been reviewed. The emphasis of this review article is mainly on the compartmentalized catalytic activity of adenylate kinase in relation to creatine kinase isoenzymes, and other enzymes of energy production and utilization processes in muscle cells. At present the role of adenylate kinase is considered simply to equilibrate the stores of adenine nucleotides. Recent studies by us and others, however, suggest an entirely new view of the metabolic importance of adenylate kinase in muscle function. This view offers a closer interaction between adenylate kinase and creatine kinase, in the process of energy production (at mitochondrial and glycolytic sites), and energy utilization (at myofibrillar sites and perhaps other sites such as sarcoplasmic reticular, sarcolemmal membrane, etc.), thus being an integral part of the high energy phosphate transport system.This review article opens up the opportunity to further examine the metabolism of adenine nucleotides and their fluxes through the adenylate kinase system in intact muscle cells. Using an intact system, having a preserved integrity of their compartmentalized enzymes and substrates, is essential in clarifying the exact role of adenylate kinase in high energy phosphate metabolism in muscle cells.     

Rre37 stimulates accumulation of 2-oxoglutarate and glycogen under nitrogen starvation in Synechocystis sp. PCC 6803

Rre37 (sll1330) in a cyanobacterium Synechocystis sp. PCC 6803 acts as a regulatory protein for sugar catabolic genes during nitrogen starvation. Low glycogen accumulation in Δrre37 was due to low expression of glycogen anabolic genes. In addition to low 2-oxoglutarate accumulation, normal upregulated expression of genes encoding glutamate synthases (gltD and gltB) as well as accumulation of metabolites in glycolysis (fructose-6-phosphate, fructose-1,6-bisphosphate, and glyceraldehyde-3-phosphate) and tricarboxylic acid (TCA) cycle (oxaloacetate, fumarate, succinate, and aconitate) were abolished by rre37 knockout. Rre37 regulates 2-oxoglutarate accumulation, glycogen accumulation through expression of glycogen anabolic genes, and TCA cycle metabolites accumulation.     

Dissection of the bifunctional ARGRII protein involved in the regulation of arginine anabolic and catabolic pathways.

ARGRII is a regulatory protein which regulates the arginine anabolic and catabolic pathways in combination with ARGRI and ARGRIII. We have investigated, by deletion analysis and fusion to LexA protein, the different domains of ARGRII protein. In contrast to other yeast regulatory proteins, 92% of ARGRII is necessary for its anabolic repression function and 80% is necessary for its catabolic activator function. We can define three domains in this protein: a putative DNA-binding domain containing a zinc finger motif, a region more involved in the repression activity located around the RNase-like sequence, and a large activation domain.     

Muscle metabolism during exercise in dogs after 8-week confinement

Several indicators of muscle metabolism were measured in dogs during exercise following 8 weeks of confinement in cages. Muscle tissue samples were studied at rest and following exercise for adenine nucleotides, creatine phosphate, creatine, glycogen, pyruvate, and lactate. Results indicate that confinement results in less efficient metabolic responses to exercise, decreased muscle glycogen at rest, and changes in the equilibrium between ATP breakdown and resynthesis during exercise.     

2-Oxoglutarate dehydrogenase complex and its multipoint control

Enzymes control the course of biochemical reactions. The enzymes involved in bioenergetic processes play most important role in cell metabolism. One of them is 2-oxoglutarate dehydrogenase complex (OGDHC), the key regulatory enzyme of Krebs cycle. Krebs cycle integrates basic metabolic pathways of carbohydrates, fatty acids and amino acids during catabolic as well as anabolic reactions. Due to the key position of OGDHC in mitochondrial metabolism, its activity is controlled by many factors. Allosteric regulation by positive effectors (ADP, Pi, Ca2+, Mn2+) of the complex is very important. These effectors strongly enhances affinity of the first component of OGDHC to 2-oxoglutarate. Moreover there are negative effectors (ATP, NADH, succinyl-CoA) which affect all three enzymes of the complex. Regulation of biosynthesis of individual components of the complex by activation or inactivation of genes expression is very important for proper OGDHC activity too. Activity of OGDHC also depends on posttranslational modifications of its components. All of this control processes maintain OGDHC activity on adequate level and prevent the complex against its excessive action.     

Metabolic alterations associated with increased energy demand in fish white muscle

Summary Time course measurements of glycogen, lactate, creatine phosphate, the adenylates and ammonia contents were made during the transition from rest to various levels of activity in fish (Macrozoarces americanus) white muscle. The muscle was perturbed by direct electrical stimulation resulting in sustained tetanus, 60 contractions/min or 20 contractions/min. Increased ATP demand was invariably associated with decreases in creatine phosphate followed by increases in lactate levels. The contribution of creatine phosphate to anaerobic energy production was equivalent to that of anaerobic glycolysis. In addition, decreases in creatine phosphate content may play an important role in the facilitation of glycolytic flux presumably by relief of inhibition of phosphofructokinase. Under some conditions the work transition was associated with an initial transient increase in ATP content which could not be accounted for by decreases in ADP and AMP levels. Furthermore, ammonia content was noted to oscillate during the work period, a feature which is fundamentally different from that which occurs in mammalian muscle.     

Role of creatine phosphokinase in cellular function and metabolism.

This paper summarizes the data concerning the role of the creatine phosphokinase system in muscle cells with main attention to the cardiac muscle. Creatine phosphokinase isoenzymes play a key role in the intracellular energy transport from mitochondria to myofibrils and other sites of energy utilization. Due to the existence of the creatine phosphate pathway for energy transport, intracellular creatine phosphate concentration is apparently an important regulatory factor for muscle contraction which influences the contractile force by determining the rate of regeneration of ATP directly available for myosin ATPase, and at the same time controls the activator calcium entry into the myoplasm across the surface membrane of the cells.     

Peculiarities of carbohydrate energy and nitrogen metabolism in rat brain affected by magnetic fields of commercial frequency

Carbohydrate oxidation, the coupling of oxidation with phosphorylation and the level of nucleic acids in the brain tissue were studied as affected by variable magnetic fields of commercial frequency (50 Hz) depending on intensity and regime of generation. A repeated effect (15-seances) of the 32 kA/m continuous magnetic field decreases the content of glycogen, creatine phosphate, intensity of oxygen uptake and etherification of inorganic phosphate, glutamine and increases the DNA content. The 7.5 kA/m continuous magnetic field has no effect on the studied metabolic indices in the brain whereas the interrupted field (1s impulse duration, 2s interimpulse interval) of the same intensity and exposition lowers the amount of glycogen, glucose, creatine phosphate, the RNA and DNA exposition lowers the amount of glycogen, glucose, creatine phosphate, the RNA and DNA levels, activates the oxidation processes, intensifies their coupling with phosphorylation.     

Converting catabolic ornithine carbamoyltransferase to an anabolic enzyme

Pseudomonas aeruginosa has an anabolic and a catabolic ornithine carbamoyltransferase (OTCase). In vitro, these homologous enzymes catalyze the same reaction (ornithine + carbamoyl phosphate (CP) in equilibrium citrulline + Pi), yet in vivo they function unidirectionally owing to specific kinetic properties. The catabolic OTC-ase cannot promote the anabolic reaction (citrulline formation) in vivo because of a sigmoidal CP saturation curve and a high CP concentration for half-maximal velocity. The structural basis for this kinetic specialization was examined. The catabolic OTCase lost most of its homotropic cooperativity and gained anabolic activity when an amino acid residue near the CP binding site, Glu-106, was replaced by alanine or glycine. In the anabolic OTCase of Escherichia coli the glutamine residue corresponding to Glu-106 was exchanged for glutamate; however, in this case no CP cooperativity was acquired. Thus, in catabolic OTCase, sequence features in addition to Glu-106 are important for sigmoidal CP saturation, and such a sequence was identified in the C-terminal part. By an in vivo gene fusion technique the 9 C-terminal amino acids of catabolic OTCase were replaced by the homologous 8 amino acids from anabolic OTCase of E. coli; the hybrid enzyme had a markedly reduced homotropic cooperativity. This gene fusion method should be generally useful for directed enzyme evolution.     

Signatures of nitrogen limitation in the elemental composition of the proteins involved in the metabolic apparatus

Nitrogen (N) is a fundamental component of nucleotides and amino acids and is often a limiting nutrient in natural ecosystems. Thus, study of the N content of biomolecules may establish important connections between ecology and genomics. However, while significant differences in the elemental composition of whole organisms are well documented, how the flux of nutrients in the cell has shaped the evolution of different cellular processes remains poorly understood. By examining the elemental composition of major functional classes of proteins in four multicellular eukaryotic model organisms, we find that the catabolic machinery shows substantially lower N content than the anabolic machinery and the rest of the proteome. This pattern suggests that ecological selection for N conservation specifically targets cellular components that are highly expressed in response to nutrient limitation. We propose that the RNA component of the anabolic machineries is the mechanistic force driving the elemental imbalance we found, and that RNA functions as an intracellular nutrient reservoir that is degraded and recycled during starvation periods. A comparison of the elemental composition of the anabolic and catabolic machineries in species that have experienced different levels of N limitation in their evolutionary history (animals versus plants) suggests that selection for N conservation has preferentially targeted the catabolic machineries of plants, resulting in a lower N content of the proteins involved in their catabolic processes. These findings link the composition of major cellular components to the environmental factors that trigger the activation of those components, suggesting that resource availability has constrained the atomic composition and the molecular architecture of the biotic processes that enable cells to respond to reduced nutrient availability.     

Pyridine nucleotides and redox-charge evolution during the induction of flowering in spinach leaves

In the long-day plant Spinacia oleracea changes in the pool size of pyridine nucleotides have been followed under different photoperiodic conditions. In short days (vegetative state), the dark and light phases of the cycle are characterized by specific reciprocal changes in NAD and NADP pool sizes. As a consequence, the ratios of NADH/NAD+NADH and NADPH/NADP+NADPH, which are respectively considered to represent the catabolic and anabolic state of metabolism, also show a characteristic pattern. Upon transfer to continuous light, i.e. during floral induction, a decrease in anabolic metabolism is paralleled by an increase in catabolic metabolism. In the floral state, both the catabolic and the anabolic couples of the pyridine nucleotides are considerably depressed, possibly reflecting the enhanced senescence of induced leaves. The results are discussed in relation to the involvment of the nucleotides in stoichiometric coupling of metabolic compartments at the cellular level in response to environmental signals.     

The interplay between covalent and non-covalent regulation of glycogen phosphorylase. The role of different effectors of phosphorylase b on the phosphorylase b to a conversion rate.

Glycogen phosphorylase b is converted to glycogen phosphorylase a, the covalently activated form of the enzyme, by phosphorylase kinase. Glc-6-P, which is an allosteric inhibitor of phosphorylase b, and glycogen, which is a substrate of this enzyme, are already known to have respectively an inhibiting and activating effect upon the rate of conversion from phosphorylase b to phosphorylase a by phosphorylase kinase. In the former case, this effect is due to the binding of glucose-6-phosphate to glycogen phosphorylase b. In order to investigate whether or not the rate of conversion of glycogen phosphorylase b to phosphorylase a depends on the conformational state of the b substrate, we have tested the action of the most specific effectors of glycogen phosphorylase b activity upon the rate of conversion from phosphorylase b to phosphorylase a at 0 degrees C and 22 degrees C : AMP and other strong activators, IMP and weak activators, Glc-6-P, glycogen. Glc-1-P and phosphate. AMP and strong activators have a very important inhibitory effect at low temperature, but not at room temperature, whereas the weak activators have always a very weak, if even existing, inhibitory effect at both temperatures. We confirmed the very strong inhibiting effect of Glc-6-P at both temperatures, and the strong activating effect of glycogen. We have shown that phosphate has a very strong inhibitory effect, whereas Glc-1-P has an activating effect only at room temperature and at non-physiological concentrations. The concomitant effects of substrates and nucleotides have also been studied. The observed effects of all these ligands may be either direct ones on phosphorylase kinase, or indirect ones, the ligand modifying the conformation of phosphorylase b and its interaction with phosphorylase kinase. Since we have no control experiments with a peptidic fragment of phosphorylase b, the interpretation of our results remains putative. However, the differential effects observed with different nucleotides are in agreement with the simple conformational scheme proposed earlier. Therefore, it is suggested that phosphorylase kinase recognizes differently the different conformations of glycogen phosphorylase b. In agreement with such an explanation, it is shown that the inhibiting effect of AMP is mediated by a slow isomerisation which has been previously ascribed to a quaternary conformational change of glycogen phosphorylase b. The results presented here (in particular, the important effect of glycogen and phosphate) are also discussed in correlation with the physiological role of the different ligands as regulatory signals in the in vivo situation where phosphorylase is inserted into the glycogen particle.