小麦叶面积指数与冠层反射光谱的定量关系

在分析不同氮素水平下小麦叶面积指数（LAI）和冠层光谱反射率随生育期变化模式的基础上,确立了LAI与冠层光谱反射率及光谱参数的相关关系,提出了小麦LAI的敏感光谱参数及预测方程.结果表明,小麦LAI和近红外短波段（760～1 220 nm）反射率都随施氮量的增加呈上升趋势,可见光波段反射率则相反;从拔节期到成熟期,LAI和近红外短波段反射率均表现为先上升后下降的趋势,而可见光波段（460～710 nm）反射率随生育期的推进先降低后升高,以孕穗期反射率最低,近红外长波段区域（1 480～1 650 nm）反射率的变化与可见光部分相同.LAI与可见光波段反射率呈负相关,与近红外短波段反射率呈极显著正相关,其中以810 nm相关性最好.可以选择RVI(810,510)和DVI(810,560)作为反演小麦LAI的光谱参数.另外,在证明垂直植被指数PVI和转换型土壤调整指数TSAVI对LAI预测能力的同时,发现利用RVI(810,510)、DVI(810,560)和PVI 3个植被指数共同推算小麦LAI的准确度更高.     

Classification of rhizosphere components using visible–near infrared spectral images

To establish new techniques for automatic classification of rhizosphere components, we investigated the utility of visible (VIS) and near–infrared (NIR) spectral images of the rhizosphere under two soil moisture conditions (mean volumetric water content: 0.39 and 0.16 cm³ cm^?3). Spectral reflectance images of the belowground parts of hybrid poplar cuttings (Populus deltoides × P. euramericana, I45/51) grown in a rhizobox were recorded at 120 spectral bands ranging from 480 to 972 nm. We examined which wavelengths were suitable and the number of spectral bands needed to accurately classify live roots of four age classes, dead roots, leaf mold, and soil. VIS reflectance (<700 nm) of live roots first increased and then decreased with age, whereas NIR reflectance (≥700 nm) was stable in mature roots. The reflectance of dead roots was lower than that of mature roots in both the VIS and NIR spectral regions. VIS reflectance did not differ among dead roots, leaf mold, and soil, but the NIR reflectance was clearly lower in soil than in the other materials. The reflectance of leaf mold and soil increased mainly in the NIR spectral region with reducing soil moisture, but this increase did not affect the order of reflectance intensity among the rhizosphere components in general. Although the most suitable spectral bands statistically selected for classifying rhizosphere components differed somewhat between moist and dry conditions, the spectral bands 580–679 nm (VIS) and 848–894 nm (NIR) provided high reliability under both conditions. Classification accuracy was higher when using two to five VIS–NIR images (overall accuracy ≥87.8%) than three VIS images (red, green, and blue; accuracy <67.1%). The high accuracy with VIS–NIR was mainly due to successful separation of leaf mold and soil. Irrespective of soil moisture condition, the overall accuracy tended to be stable at 92–94% with use of four VIS–NIR images. The spectral bands effective in wet soil conditions could also be used for classification in dry conditions, with overall accuracies >86.9%. These results suggest that automatic image analysis using VIS–NIR images at four spectral bands, including red and NIR, allows for accurate classification of the growth stage or live/dead status of roots and distinguishes between leaf mold and soil.     

Nondestructive estimation of anthocyanins and chlorophylls in anthocyanic leaves

The anthocyanin and chlorophyll contents in leaves provide valuable information about the physiological status of plants. Thus, there is a need for accurate, efficient, and practical methodologies to estimate these biochemical parameters of vegetation. In this study, we tested the performance and accuracy of several nondestructive, reflectance-based techniques for estimating anthocyanin and chlorophyll contents in leaves of four unrelated species, European hazel (Corylus avellana), Siberian dogwood (Cornus alba =Swida alba), Norway maple (Acer platanoides), and Virginia creeper (Parthenocissus quinquefolia), with widely variable pigment content and composition. An anthocyanin reflectance index, which uses reflectances in the green and red edge spectral bands, and a modified anthocyanin reflectance index, employing, in addition, the near-infrared (NIR) band, were able to accurately estimate leaf anthocyanin for all species taken together with no reparameterization of algorithms. Total chlorophyll content was accurately estimated by a red edge chlorophyll index that uses spectral bands in the red edge and the NIR. These approaches can be used to estimate anthocyanin and chlorophyll nondestructively and allow the development of simple handheld field instrumentation.     

Disentangling thermal from alternative drivers of reflectance in jewel beetles: A macroecological study

Aim

To predict future colour–climate relationships, it is important to distinguish thermal drivers of reflectance from other evolutionary drivers. We aimed to achieve this by comparing relationships between climate and coloration in ultraviolet–visible (UV–Vis) and near-infrared (NIR) light, separately.

Location

Samples were distributed primarily across Australia and North America, with some from Africa and Asia.

Major taxa studied

Coleoptera: Buprestidae.

Methods

We used jewel beetles as models to identify climatic drivers of reflectance, because jewel beetles have highly diverse coloration and a wide distribution and are often active in hot conditions. Specifically, we tested the association between climate, body size and reflectance using a phylogenetic comparative analysis for three wavebands (UV–Vis, NIR and total).

Results

Reflectance of jewel beetles was more strongly predicted by body size than by climate. NIR reflectance and total reflectance were not associated with climate, but larger beetles had higher NIR reflectance. For UV–Vis reflectance, small beetles were darker in warmer and more humid environments, whereas there was no association with climate for large beetles.

Main conclusions

Our study suggests that variation in reflectance of jewel beetles is not driven by thermal requirements and highlights the importance of considering NIR reflectance when evaluating explanations of the effects of colour on thermoregulation.     

Mapping the myoglobin concentration, oxygenation, and optical pathlength in heart ex vivo using near-infrared imaging

A method that provides maps of absolute concentrations of oxygenated and deoxygenated myoglobin (Mb), its oxygenation, and its near-infrared (NIR) optical pathlength in cardiac tissue was developed. These parameters are available simultaneously. The method is based on NIR diffuse reflectance spectroscopic imaging and specific processing of the NIR images, which included a first derivative of the diffuse reflectance spectrum. Mb oxygenation, total Mb concentration, and NIR light pathlength were found to be in the range of 92%, 0.3 mM, and 12.5 mm, respectively, in beating isolated buffer-perfused and arrested pig hearts. The charge-coupled device camera enables sub-millimeter spatial resolution and spectroscopic imaging in 1.5 to 2.0 min. The technique is noninvasive and nondestructive. The equipment has no mechanical contact with the tissue of interest, leaving it undisturbed.     

基于高光谱遥感的小麦叶片氮积累量

作物氮素状况是评价长势、提高产量和改善品质的重要指标,因此叶片氮积累量的实时无损估测对作物生产的氮素管理具有重要意义.以多个小麦品种在不同施氮水平下的连续3a大田试验为基础,研究了小麦叶片氮积累量与冠层高光谱参数的定量关系.结果表明,冠层叶片氮积累量随着施氮水平的提高而增加,光谱反射率在不同叶片氮积累量水平下发生相应的变化.叶片氮积累量的敏感波段主要存在于近红外平台和可见光区,其中,"红边"区域表现最为显著.通过微分等技术构造多种植被指数,对高光谱参数和叶片氮积累量间进行相关回归分析,SDr/SDb、FD742和AVHRR-GVI 3个参数与叶片氮积累量关系最密切,方程拟合决定系数R2分别为0.9163、0.9097和0.9142,估计标准误差SE分别为1.165、1.079和1.077.经不同年际独立数据的检验表明,利用光谱参数FD742建立的模型对叶片氮积累量的估测精度为0.8449,预测的RMSE为0.984;红边位置REPIG对叶片氮积累量的估测精度和预测的RMSE分别为0.8394和1.014,表明预测值与观察值之间符合精度高,比较而言,FD742为自变量建立的模型可以更好地评估不同条件下叶片氮素积累状况.     

Canopy spectral characteristics of typical invasive and native plants in the coastal wetland of Yancheng City,China

Spartina alterniflora (S. alterniflora) is a dominant invasive alien species that occurs in Yancheng Wetland National Nature Reserve, the largest coastal wetland in China. It expands rapidly and exerts great threats to local ecosystem. The main native species there are Phragmites australis (P. australis) and Suaeda salsa (S. salsa), respectively. In order to monitor their dynamics, it is of great significance to analyze their spectral discrimination. Canopy spectra of these typical species were measured in July and October in order to compare species differences, as well as the seasonal variation. The Normalized Difference Vegetation Index (NDVI) was calculated based on canopy spectra. The significances of differences in spectral characteristic among species were tested using the one-way analysis of variance (ANOVA) (P < 0.05). The results showed that the visible (VI) bands were the optimum wavelengths for species discrimination in both seasons. S. alterniflora always had the greatest green peak height and red absorption depth. S. salsa had no obvious green peak, but an obvious red reflection peak. P. australis generally had intermediate values. Spectra in the near-infrared (NIR) bands were not appropriate for delineating S. alterniflora and P. australis in summer, as they showed similar values in these wavelengths. But NIR bands could be used to distinguish S. salsa in summer, as it had significantly lower reflectance in NIR bands than the others. Meanwhile, the reflectance in short-wavelength infrared (SWIR) bands became another suitable approach for distinguishing species in autumn. S. salsa had significantly higher values than the others in SWIR regions. Significant NDVI differences between different species proved that it could improve the species discrimination. S. alterniflora always had the highest NDVI values, while S. salsa had the lowest values. The seasonal trend of canopy spectra was also revealed. With plant maturity, the reflectance values in green bands and NIR bands decreased significantly, but increased significantly around the yellow-red wavelengths. The green peak heights, red absorption depths, and NDVI values of the species decreased remarkably. Furthermore, S. alterniflora and P. australis illustrated obvious ‘blue shift’ of the red edge with senescence. These results pointed out the the potential bands and appropriate spectral parameters appropriate for species discrimination, and highlighted the influence of seasonality on spectral information. They provided an important basis for salt marshes identification and dynamic monitoring on a large scale.     

Polarized and specular reflectance variation with leaf surface features

The linearly polarized reflectance from a leaf depends on the characteristics of the leaf surface. In the present study the leaf reflectance of a number of plant species with varying surface characteristics was measured at the Brewster angle with a polarization photometer having 5 visible and near-infrared wavelength bands. We found that all leaf surfaces polarized incident light. Differences among species could be explained by variation in surface features. The results support our hypothesis that the polarized light is reflected by the leaf surface, not by its interior. Two mechanisms appeared responsible for the linearly polarized reflectance: (1) specular reflectance and (2) surface particle scattering. In most cases, large values of linearly polarized reflectance could be attributed to specular reflectance from the leaf surface. Attribution required knowledge of the optical dimensions of features on the leaf surface.     

不同水氮条件下水稻冠层反射光谱与植株含水率的定量关系

研究了不同土壤水氮条件下水稻 (Oryzasativa) 冠层光谱反射特征和植株水分状况的量化关系。结果表明, 水稻冠层近红外光谱反射率随土壤含水量的降低而降低, 短波红外光谱反射率随土壤含水量的降低而升高。相同土壤水分条件下, 高氮水稻的冠层含水率高于低氮水稻的冠层含水率 ;同一水分条件下, 高氮处理的可见光区和短波红外波段光谱反射率低于低氮处理, 近红外波段光谱反射率高于低氮处理。发现拔节后比值植被指数 (R810 /R460 ) 与水稻叶片含水率和植株含水率呈极显著的线性相关, 模型的检验误差 (RootmeansquareError, RMSE) 分别为 0.93和 1.5 0。表明比值植被指数R810 /R460 可以较好地监测不同生育期水稻叶片和植株含水率。     

Multispectral fluorescence and reflectance imaging at the leaf level and its possible applications

Images taken at different spectral bands are increasingly used for characterizing plants and their health status. In contrast to conventional point measurements, imaging detects the distribution and quantity of signals and thus improves the interpretation of fluorescence and reflectance signatures. In multispectral fluorescence and reflectance set-ups, images are separately acquired for the fluorescence in the blue, green, red, and far red, as well as for the reflectance in the green and in the near infrared regions. In addition, 'reference' colour images are taken with an RGB (red, green, blue) camera. Examples of imaging for the detection of photosynthetic activity, UV screening caused by UV-absorbing substances, fruit quality, leaf tissue structure, and disease symptoms are introduced. Subsequently, the different instrumentations used for multispectral fluorescence and reflectance imaging of leaves and fruits are discussed. Various types of irradiation and excitation light sources, detectors, and components for image acquisition and image processing are outlined. The acquired images (or image sequences) can be analysed either directly for each spectral range (wherein they were captured) or after calculating ratios of the different spectral bands. This analysis can be carried out for different regions of interest selected manually or (semi)-automatically. Fluorescence and reflectance imaging in different spectral bands represents a promising tool for non-destructive plant monitoring and a 'road' to a broad range of identification tasks.     

应用近红外光谱估测小麦叶片氮含量

研究利用近红外光谱(near-infrared, NIR)和化学计量学方法估测小麦(Triticum aestivum)新鲜叶片和粉末状干叶中全氮含量的可行性, 并建立小麦叶片氮含量估测模型, 以期为小麦氮素营养的精确管理提供理论依据。以3个小麦田间试验观测资料为基础, 分别运用偏最小二乘法(partial least squares, PLS)、反向传播神经网络(back-propagation neural network, BPNN)和小波神经网络(wavelet neural network, WNN), 建立小麦叶片氮含量的鲜叶和粉末状干叶近红外光谱估测模型, 用随机选择的样品集对所建模型进行测试和检验。结果显示, 利用PLS、BPNN和WNN 3种方法构建的近红外光谱模型均能准确地估测小麦叶片氮含量, 其中基于BPNN和WNN的模型优于基于PLS的模型, 且以基于WNN的模型表现最好。对模型进行检验的结果显示, 粉末状干叶模型的预测均方根误差(RMSEP)分别为0.147、0.101和0.094, 鲜叶模型的RMSEP分别为0.216、0.175和0.169, 模型的相关系数均在0.84以上。因此, 利用近红外光谱估算小麦叶片氮素营养精确可行, 对其他作物的氮素营养估测提供了借鉴和参考。     

陇中黄土高原春小麦光谱反射特征

通过田间小区试验,测定了3个春小麦品种(高原602、陇春8139和定西24)在不同生育期和不同种植密度的光谱反射率及对应叶面积指数(LAI)和地上生物量,分析了其光谱反射的一般特征和红边参数特征以及光谱变量与LAI和地上生物量的相关性.结果表明:在整个波段内,春小麦冠层光谱表现为高原602＞陇春8139＞定西24,其叶片光谱表现为定西24＞陇春8139＞高原602;春小麦冠层光谱在可见光波段和中红外波段成熟期明显大于孕穗期,而叶片光谱在近红外波段孕穗期明显大于成熟期;随着种植密度的提高,在近红外波段冠层和叶片的光谱反射率逐渐增加;冠层光谱的红边均具有"双峰"现象,从孕穗期到成熟期,冠层红边位置呈现"蓝移"现象;LAI和地上生物量与冠层光谱变量之间存在较好的相关性.     

Red and near-infrared light induces intracellular Ca2+ flux via the activation of glutamate N-methyl-D-aspartate receptors

Red and near-infrared (NIR) light effect on Ca²⁺ ions flux through the influence on N-methyl-D-aspartate receptors (NMDARs) and their functioning in HeLa cells was studied in vitro. Cells were irradiated by 650 and 808 nm laser light at different power densities and doses and the obtained effect was compared with that caused by the pharmacological agents. The laser light was found to elevate Ca²⁺ influx into cell cytoplasm in a dose-dependent manner without changes of the NMDAR functioning. Furthermore, the light of both wavelengths demonstrated the ability to elevate Ca²⁺ influx under the pharmacological blockade of NMDARs and also might partially abolish the blockade enhancing Ca²⁺ influx after selective stimulation of the receptors with NMDA. Simultaneously, the light at moderate doses demonstrated a photobiostimulating effect on cells. Based on our experiments and data reported in the literature, we suggest that the low-power visible and NIR light can instigate a cell membrane depolarization via nonthermal activation, resulting in the fast induction of Ca²⁺ influx into cells. The obtained results also demonstrate that NIR light can be used for nonthermal and nonpharmacological stimulation of NMDARs in cancer cells.     

Hyperspectral imaging as a diagnostic tool to differentiate between amalgam tattoos and other dark pigmented intraoral lesions

The goal of this project is to identify any in-depth benefits and drawbacks in the diagnosis of amalgam tattoos and other pigmented intraoral lesions using hyperspectral imagery collected from amalgam tattoos, benign, and malignant melanocytic neoplasms. Software solutions capable of classifying pigmented lesions of the skin already exist, but conventional red, green and blue images may be reaching an upper limit in their performance. Emerging technologies, such as hyperspectral imaging (HSI) utilize more than a hundred, continuous data channels, while also collecting data in the infrared. A total of 18 paraffin-embedded human tissue specimens of dark pigmented intraoral lesions (including the lip) were analyzed using visible and near-infrared (VIS–NIR) hyperspectral imagery obtained from HE-stained histopathological slides. Transmittance data were collected between 450 and 900 nm using a snapshot camera mounted to a microscope with a halogen light source. VIS–NIR spectra collected from different specimens, such as melanocytic cells and other tissues (eg, epithelium), produced distinct and diagnostic spectra that were used to identify these materials in several regions of interest, making it possible to distinguish between intraoral amalgam tattoos (intramucosal metallic foreign bodies) and melanocytic lesions of the intraoral mucosa and the lip (each with P < .01 using the independent t test). HSI is presented as a diagnostic tool for the rapidly growing field of digital pathology. In this preliminary study, amalgam tattoos were reliably differentiated from melanocytic lesions of the oral cavity and the lip.     

Comparison of multivariate methods for estimating soil total nitrogen with visible/near-infrared spectroscopy

Aims

This study aimed to compare stepwise multiple linear regression (SMLR), partial least squares regression (PLSR) and support vector machine regression (SVMR) for estimating soil total nitrogen (TN) contents with laboratory visible/near-infrared reflectance (Vis/NIR) of selected coarse and heterogeneous soils. Moreover, the effects of the first (1st) vs. second (2nd) derivative of spectral reflectance and the importance wavelengths were explored.

Methods

The TN contents and the Vis/NIR were measured in the laboratory. Several methods were employed for Vis/NIR data pre-processing. The SMLR, PLSR and SVMR models were calibrated and validated using independent datasets.

Results

Results showed that the SVMR and the PLSR models had similar performances, and better performances than the SMLR. The spectral bands near 1450, 1850, 2250, 2330 and 2430 nm in the PLSR model were important wavelengths. In addition, the 1st derivative was more appropriate than the 2nd derivative for spectral data pre-processing.

Conclusions

PLSR was the most suitable method for estimating TN contents in this study. SVMR may be a promising technique, and its potential needs to be further explored. Moreover, the future studies using outdoor and airborne/satellite hyperspectral data for estimating TN content are necessary for testing the findings.     

Novel near-infrared cyanine fluorochromes: synthesis,properties, and bioconjugation

Recently, near-infrared (NIR) fluorescence light has been applied to image various biological events in vivo, because it penetrates tissue more efficiently than light in the visible spectrum. Compounds exhibiting fluorescent properties in the NIR range are key elements for this upcoming optical imaging technology. In this paper, we report the synthesis of four new, water-soluble NIR cyanine fluorochromes which have superior chemical stability and optical properties. Each fluorochrome was designed with a monoreactive carboxyl group for labeling purposes. When multiple fluorochromes were attached to a single macromolecule, fluorescence quenching was observed. On the basis of this property, a novel autoquenched enzyme sensitive NIR fluorescence probe was prepared.     

A spectral analysis of stem bark for boreal and temperate tree species

The woody material of forest canopies has a significant effect on the total forest reflectance and on the interpretation of remotely sensed data, yet research on the spectral properties of bark has been limited. We developed a novel measurement setup for acquiring stem bark reflectance spectra in field conditions, using a mobile hyperspectral camera. The setup was used for stem bark reflectance measurements of ten boreal and temperate tree species in the visible (VIS) to near‐infrared (NIR) (400–1000 nm) wavelength region. Twenty trees of each species were measured, constituting a total of 200 hyperspectral reflectance images. The mean bark spectra of species were similar in the VIS region, and the interspecific variation was largest in the NIR region. The intraspecific variation of bark spectra was high for all studied species from the VIS to the NIR region. The spectral similarity of our study species did not correspond to the general phylogenetic lineages. The hyperspectral reflectance images revealed that the distributions of per‐pixel reflectance values within images were species‐specific. The spectral library collected in this study contributes toward building a comprehensive understanding of the spectral diversity of forests needed not only in remote sensing applications but also in, for example, biodiversity or land surface modeling studies.     

水稻氮素营养高光谱遥感诊断模型

对水稻氮素含量与原始光谱反射率、一阶微分光谱以及高光谱特征参数间的相关性进行了分析,并构建和验证了以遥感参数为自变量的水稻氮素营养诊断模型.结果表明：氮素含量在水稻各器官中总的变化趋势为茎<鞘<穗<叶;各器官在可见光波段的光谱反射能力为叶<穗<鞘<茎,在近红外波段则与此相反.以波长796.7 nm处的光谱反射率和738.4 nm处的一阶微分光谱反射率为自变量的线性模型和指数模型的决定系数（R²）分别为0.7996和0.8606,二者均能较好地诊断水稻氮素营养,但最适合诊断水稻氮素含量的拟合模型是以植被指数的归一化变量（SD_r-SD_b）/（SD_r+SD_b）为自变量构建的水稻氮素营养高光谱遥感诊断模型［y=365871+639323（SD_r-SD_b）/（SD_r+SD_b）,R₂＝0.8755,RMSE＝0.2372,相对误差＝11.36％］,该模型可定量诊断水稻氮素营养.     

Relationship of Aerial Broad Band Reflectance to Meloidogyne incognita Density in Cotton

Aerial images were obtained on 22 July 1999 and 4 August 2000 from five cotton sites infested with Meloidogyne incognita. Images contained three broad bands representing the green (500-600 nm), red (600-700 nm), and near-infrared (700-900 nm) spectrum. Soil samples were collected and assayed for nematodes in the fall at these sites. Sampling locations were identified from images, by locating the coordinates of a wide range of light intensity (measured as a digital number) for each single band, and combinations of bands. There was no single band or band combination in which reflectance consistently predicted M. incognita density. In all 10 site-year combinations, the minimum number of samples necessary to estimate M. incognita density within 25% of the population mean was greater when sampling by reflectance-based classes (3 to 4 per site) than sampling based on the entire site as one unit. Two sites were sampled at multiple times during the growing season. At these sites, there was no single time during the growing season optimal to take images for nematode sampling. Aerial infrared photography conducted during the growing season could not be used to accurately determine fall population densities of M. incognita.     

Seasonal changes in reflectance and standing crop biomass in three salt marsh communities

Reflectance of red (656-705 nm) and infrared (776-826 nm) solar radiation and standing crop biomass were measured in three salt marsh communities at intervals of approximately 2 weeks between February and August 1974. Red reflectance declined at the onset of greening in each community and was correlated with standing crop of green biomass. Infrared reflectance increased substantially in the shrub community but less in the grass and sedge communities. The inverse of red reflectance was found to be a reliable predictor of green biomass in sedge and grass communities, but not in a shrub community.