Size‐dependent microhabitat use and intraspecific competition in Cottus gobio

An electrofishing survey of daytime shelter microhabitat use of bullhead Cottus gobio in a southern English chalk stream revealed positive selection for moderate water velocity, vegetation cover and coarse substrata. Water depth, other forms of cover, shade and substratum embeddedness had no significant influence on the distribution of fish. Microhabitat use was size‐dependent, with patches occupied by adult fish containing coarser substrata and less blanket weed ( Cladophora algae) than those occupied by smaller juvenile conspecifics. Differences in substratum use between size‐classes were less pronounced in parts of the stream shaded by the tree canopy. In laboratory tanks stocked at low fish density, both juveniles and adults favoured use of cobbles over pebbles. The response of fish to increased conspecific density was size‐dependent; juveniles reduced use of the coarse substratum whereas adults maintained their predominance in this habitat. An apparently greater shift by juveniles when in the presence of adults was significant at α = 0·10 only, as was an apparent reduction in interactions between size‐classes under low light intensity. The displacement of small juvenile fish from the preferred cobble substratum is consistent with the hypothesis that intraspecific competition contributes to the size‐related microhabitat shift observed in the field. Although there was a tendency for the strength of competition to be reduced at low light levels, the mechanism by which tree canopy cover affects microhabitat use remains uncertain.     

Spatial microhabitat selection by Biomphalaria pfeifferi in a small perennial river in Tanzania

A study was carried out in the Mlali river in south-central Tanzania with two aims. First, to determine microhabitat availability in two sites (A and B) with respect to water depth, water velocity and dominant substratum type. Second, to assess microhabitat use by Biomphalaria pfeifferi, the intermediate host snail of intestinal schistosomiasis and to investigate whether these snails show preferences for certain microhabitats. The two sites differed significantly with respect to width, water depth, water velocity and substratum composition. It is suggested that the absence of B. pfeifferi from site B is mainly associated with the high water velocities at that site, where 62% of the measurements exceeded30 cm s^-1. In site A, the microhabitat use by 327 B. pfeifferi snails was assessed by means of direct observation. No significant relationships were found between snail size and the habitat variables investigated, indicating that snail size appeared to be of no importance in spatial microhabitat selection. B. pfeifferi snails showed statistically significant preferences for shallow water (depth: 2–7 cm) and the preferred water velocities ranged between 12 and 21 cm s^-1 with an estimated optimum at13.3 cm s^-1. No statistically significant preferences for substratum type were found. This revised version was published online in August 2006 with corrections to the Cover Date.     

Microhabitat suitability as a tool to improve the success rate of a translocation or reintroduction,case‐study of the bullhead (Cottus perifretum) in Flanders,Belgium

Microhabitat suitability models are useful tools to enhance the reintroduction success of fish. Since 2008, a translocation and reintroduction program has been carried out in Flanders to prevent substantial loss of genetic variability in the Cottus perifretum (bullhead) population, and to meet the goals set by the Habitat Directive. To this end, habitat suitability of potential headstreams was assessed on a macrohabitat and microhabitat scale prior to the reintroduction. On a macrohabitat scale, water quality, habitat structure, food availability, and fish community were screened. Based on microhabitat models for bullhead in the summer period, microhabitat suitability was assessed in headstreams where macrohabitat characteristics showed a high potential for success. Both macro‐ and microhabitat assessment showed that reintroduction of bullheads in the Nellebeek, Bruelbeek, and Mollendaalbeek would most likely lead to self‐sustaining populations. For the Sint‐Annabeek, the microhabitat suitability model, considering depth and stream velocity, estimates that 7.5–9.5% of the headstream is suitable for bullhead. However, when substratum is taken into account, the microhabitat suitability index shows that only 4.3–5.8% of the brook is suitable. The current habitat quality and quantity in the Sint‐Annabeek is estimated to support a mean total population of 812 bullheads. However, the microhabitat suitability can be substantially improved by the artificial deposition of medium‐sized gravel (5–50 mm) and large gravel (50–100 mm). By doing so, the mean estimated population size could increase up to 1,330 individuals. Our results show that habitat improvement is necessary prior to the reintroduction of bullheads in the Sint‐Annabeek.     

Spatial and temporal patterns of abundance of coral reef gobies (Teleostei: Gobiidae)

This study investigated the spatial and temporal patterns of abundance of four substratum-associated species of Gobiidae on a heterogeneous reef flat comprised of four distinct habitat zones, and examined microhabitat use within each zone. Asterropteryx semipunctatus had the widest distribution and was the most abundant species in each habitat zone, followed by Amblygobius bynoensis , Valenciennea muralis and Amblygobius phalaena . Significant temporal and spatial differences in mean density were evident. The highest density of A. semipunctatus (312 individuals 10 m^–2) was recorded in a habitat zone dominated by algal-covered rubble, whereas A. bynoensis and V. muralis were most abundant (mean summer density 5·5–5·8 individuals 10 m^–2) in habitats containing both sand and hard substrata. In contrast, A. phalaena was uncommon (mean density ≤ 0·4 individuals 10 m^–2) in all four habitat zones. Significant seasonal differences in abundance were due to the large influx of recruits in summer. Ontogenetic shifts in habitat use were not evident at either the macrohabitat ( i.e. among habitat zones) or microhabitat scale ( i.e. substratum use within zones). At the microhabitat scale, V. muralis consistently exhibited a strong positive association with sand and was rarely associated with hard substrata. In contrast, the two Amblygobius species were commonly associated with both sand and hard substrata, but patterns of microhabitat use differed among habitat zones. Substratum composition at the microhabitat scale may influence spatial patterns of abundance at larger spatial scales by providing essential resources and, or influencing carrying capacity and predation risk.     

Effects of habitat structure on habitat use by Gammarus pulex in artificial streams

1. The influence of coarse substratum and flow, coarse substratum and food, and predation risk and flow on habitat use by Gammarus pulex was studied in three experiments conducted in artificial stream channels. Each stream channel consisted of a riffle and pool habitat.
2. Location of coarse substrata and food was manipulated by placing cobbles (coarse substratum) and leaf packs (food) in different habitats. Predation risk was varied by running experiments in the presence and absence of sculpins ( Cottus gobio ), and flow was varied by pumping water with one or two pumps.
3. In all experiments Gammarus were most abundant in pools but placement of cobbles in riffles increased use of the latter. An even greater percentage of Gammarus used riffles if leaf packs were also placed there. Decreased discharge and the presence of sculpins ( Cottus gobio ) also caused Gammarus to increase use of riffles. These data indicate that Gammarus is able to evaluate differences in habitat quality and respond accordingly.     

Effects of habitat structure on habitat use by Gammarus pulex in artificial streams

1. The influence of coarse substratum and flow, coarse substratum and food, and predation risk and flow on habitat use by Gammarus pulex was studied in three experiments conducted in artificial stream channels. Each stream channel consisted of a riffle and pool habitat.
2. Location of coarse substrata and food was manipulated by placing cobbles (coarse substratum) and leaf packs (food) in different habitats. Predation risk was varied by running experiments in the presence and absence of sculpins ( Cottus gobio ), and flow was varied by pumping water with one or two pumps.
3. In all experiments Gammarus were most abundant in pools but placement of cobbles in riffles increased use of the latter. An even greater percentage of Gammarus used riffles if leaf packs were also placed there. Decreased discharge and the presence of sculpins ( Cottus gobio ) also caused Gammarus to increase use of riffles. These data indicate that Gammarus is able to evaluate differences in habitat quality and respond accordingly.     

Seasonal variation of tadpole spatial niches in permanent streams: The roles of predation risk and microhabitat availability

Phenotypic plasticity can improve fitness in unstable environments and can be expressed in many traits, such as life history attributes, growth and behavioural features. Microhabitat choice can have important consequences for development and survival of aquatic organisms and is expected to vary in response to stimuli, such as predation risk, food availability and temperature. At seasonal sites, microhabitat availability and associated benefits may change from season to season, which might lead to altered patterns of microhabitat use by tadpoles. We investigated this hypothesis in 17 streams from two localities in south‐eastern Brazil. We tested whether water level drops significantly during the dry season, whether lower water level results in altered microhabitat availability and whether predation risk changes between seasons, based on predator density. We then tested whether tadpoles change their pattern of microhabitat use, their spatial niche breadth (given by diversity of used microhabitats) and spatial niche overlap (in the case of co‐occurring species). We were able to include in our analyses tadpoles of four species of Hylidae, that occurred throughout both seasons. Stream depth decreased in the dry season, but microhabitat availability remained relatively stable in many streams, and predator density did not change significantly. Tadpoles of three out of the four species studied were more abundant during the dry season, which may be an adaptation to adjust time of metamorphosis to the rainy season. Tadpoles changed their patterns of microhabitat use between seasons, although the potential causing factors investigated did not seem to be responsible. Tadpole plasticity in microhabitat use may indicate the existence of selective pressures that vary through time and space and are still not well understood.     

Microhabitat use and interspecific associations of introduced topmouth gudgeon Pseudorasbora parva and native fishes in a small stream

To address a lack of information on topmouth gudgeon Pseudorasbora parva introduced to watercourses, the microhabitat use of this non-native cyprinid and co-existing native species was assessed in a small stream located in southern England. Overall, microhabitat use was size-structured and significant associations were observed between topmouth gudgeon and native species, including brown trout Salmo trutta , chub Leuciscus cephalus , European bullhead Cottus gobio and stone loach Barbatula barbatula . Significant associations with environmental variables, however, were more frequent in native species than in topmouth gudgeon. Topmouth gudgeon demonstrated few habitat preferences, which were weak and limited to small specimens, emphasizing the species broad, plastic breadth of microhabitat use. This is expected to facilitate the species' successful invasion of novel aquatic systems.     

Seasonal variation in diel activity and microhabitat use of an endemic New Zealand stream-dwelling galaxiid fish

1. Seasonal variation in microhabitat use and activity of 14 giant kokopu Galaxias argenteus, a drift‐feeding galaxiid fish, was compared using radiotelemetry. 2. During winter giant kokopu predominantly used low velocities and intermediate depths by night and day. Activity recorded during 24 and 72 h periods indicated that fish were consistently active at night and inactive during the day. Activity data corresponded with point‐in‐time habitat use data, both of which indicated that fish were concealed amongst cover during the day and used open water habitats at night. 3. During summer, giant kokopu used higher water velocities, shallower depths and coarser substrata, particularly at night but also occasionally during the day relative to winter. Giant kokopu were active by both day and night in summer, although periods of activity were less defined and less predictable than during winter. 4. Adults used predictable home reaches at base‐flow, with most individuals repeatedly using of one or two cover locations within their ‘home’ reach. Reaches used by fish were relatively short (rarely exceeding 26 m) irrespective of season and always included a single pool‐riffle sequence. 5. Diel and seasonal behaviour of giant kokopu was generally comparable with that exhibited by other drift feeding fish species in small temperate streams. However, the nocturnal activity of giant kokopu contrasts with activity patterns in various salmonids, indicating that the impact of predation by different drift feeding fish may vary considerably.     

Microhabitat and morphometric variation of two Chaetophoracean (Chaetophorales, Chlorophyta) species in tropical streams of southeastern Brazil

Two populations of Chaetophora elegans (Roth) C. Agardh and two of Stigeoclonium helveticum Vischer were investigated for microhabitat characteristics and morphological variation in streams of São Paulo State, southeastern Brazil. Different patterns of microhabitat distribution were found between species investigated. Populations of C, elegans were distributed under relatively narrow microhabitat conditions (high irradiance, low depth, moderate to high current velocity, rocky substrata and lower values of niche width) and showing little morphometric variation (colony diameter, main axis cell size, and apical branch number), Stigeoclonium helveticum occurred under more diverse microhabitat conditions, revealed by lack of significant difference between sampling units with and without the alga and wider niche width, but also exhibited relatively narrow morphometric variation (plant length, main axis cell and ateral branch cell sizes). The narrow microhabitat conditions and smaller niche width of C. elegans can explain its low abundance (percentage cover) in streams from the area studied as well as in other regions of São Paulo State, In contrast, the wider variation of microhabitat conditions and the higher niche widths of S. helveticum suggest that this green alga is able to grow in a high number of stream ecosystems in the region investigated, ranging from undisturbed to highly disturbed habitats. Thus. the results suggest that S. helveticum is a generalist species.     

Variation of aquatic insect assemblages among seasons and microhabitats in Hungarian second-order streams

The assemblages of aquatic insects are important members of water ecosystems. Based on former studies among the most important factors structuring the assemblages are numerous abiotic ones, such as the sort and the particle size of the substratum. Most of the sampling protocols, e.g. AQEM, determine microhabitats based on those. Nevertheless, we have no information yet about whether or not these different, precisely determined microhabitats have different assemblages. In this study we compared the aquatic insect assemblages of different microhabitat types in three seasons using ADONIS and linear discriminant analyses. We proved that seasonal changes of abiotic factors had a major role in structuring the assemblages. In spring and summer the assemblages differed significantly, however, in autumn no significant differences were found. We supposed that the variation among the assemblages was due to the abundance patterns of frequent species instead of the presence of rare or sparse species. The indicator species analyses also corroborated this suppososition while symmetrical indicator species were not found.     

Pelagic early life phase of the bullhead in a freshwater lake

In June and July 1998, in Hallstättersee, Austria, late larval/early juvenile bullhead Cottus gobio L. were found in littoral and pelagic habitats, the latter representing the first record of pelagic habitat use of this species during early life history.     

Seasonal and spatial microhabitat selection and segregation in young Atlantic salmon, Salmo salar L., and brown trout, Salmo trutta L., in a Norwegian river

Seasonal microhabitat selection by sympatric young Atlantic salmon and brown trout was studied by diving. Both species, especially Atlantic salmon, showed seasonal variation with respect to surface and mean water velocities and depth. This variation is partly attributed to varying water flows and water temperatures. In winter the fish sought shelter in the substratum. A spatial variation in habitat use along the river due to different habitat availabilities was observed. Both species occupied habitats within the ranges of the microhabitat variables, rather than selecting narrow optima. It is hypothesized that the genetic basis allows a certain range to the behavioural response. Microhabitat segregation between the two species was pronounced, with brown trout inhabiting the more slow-flowing and partly more shallow stream areas. Atlantic salmon tolerated a wider range of water velocities and depths. Habitat suitability curves were produced from both species. It is suggested that habitat suitability curves that are based on observations of fish occupancy of habitat at median or base flow may not be suitable in habitat simulation models, where available habitat is projected at substantially greater water flows.     

Depth distributions of coral reef fishes: the influence of microhabitat structure,settlement, and post-settlement processes

Many coral reef fishes have restricted depth ranges that are established at settlement or soon after, but the factors limiting these distributions are largely unknown. This study examines whether the availability of microhabitats (reef substrata) explains depth limits, and evaluates whether juvenile growth and survival are lower beyond these limits. Depth-stratified surveys of reef fishes at Kimbe Bay (Papua New Guinea) showed that the abundance of new settlers and the cover of coral substrata differed significantly among depths. A field experiment investigated whether settling coral reef fishes preferred particular depths, and whether these depth preferences were dependent on microhabitat. Small patch reefs composed of identical coral substrata were set up at five depths (3, 6, 10, 15 and 20 m), and settlement patterns were compared to those on unmanipulated reef habitat at the same five depths. For all species, settlement on patch reefs differed significantly among depths despite uniform substratum composition. For four of the six species tested, depth-related settlement patterns on unmanipulated habitat and on patch reefs did not differ, while for the other two, depth ranges were greater on the patch reefs than on unmanipulated habitat. A second experiment examined whether depth preferences reflected variation in growth and survival when microhabitat was similar. Newly settled individuals of Chrysiptera parasema and Dascyllus melanurus were placed, separately, on patch reefs at five depths (as above) and their survival and growth monitored. D. melanurus, which is restricted to shallow depths, had highest survival and growth at the shallowest depth. Depth did not affect either survival or growth of C. parasema, which has a broader depth range than D. melanurus (between 6 and 15 m). This suggests that the fitness costs potentially incurred by settling outside a preferred depth range may depend on the strength of the depth preference.     

Early ontogenetic ecology of sofie Chondrostoma toxostoma: an integrated approach to organism‐environment relationships

The influence of early life development on the swimming performance of the endangered sofie Chondrostoma toxostoma was examined to highlight trends in organism‐environment relationships. Sudden occurrences of change in integrated function were found and these were most decisive, in particular with respect to microhabitat use, between the larval and juvenile periods of development. Stabilization of relative growth, i.e . end of the remodelling process (metamorphosis), occurred well after all larval characteristics (remnants of finfold and rapid allometric growth) had disappeared and all juvenile structures had appeared (nasal septa and complete scale cover). The fact that stabilization of relative growth coincided with dramatic shifts in microhabitat use (organism needs) as well as in swimming capacity (organism skills) suggests a more 'decisive' type of change in organism‐to‐environment interaction than one purely of form, i.e . shift from nursery to adult habitat.     

Habitat partitioning in a community of darters in the Elk River, West Virginia

Microhabitat use and habitat partitioning for 10 darter species (Percidae: Etheostomatini) were studied by direct observation (snorkeling) at five sites in the Elk River drainage, West Virginia, U.S.A. We used canonical discriminant analysis and univariate tests to determine microhabitat variables that were important in segregating species. Darter species were segregated by depth, substrate size, and water velocity. In addition, Percina typically occurred in the water column, whereas species of Etheostoma were benthic and segregated by occurring under, between, and on top of rocks.     

Microhabitat use by 0+ and older fishes in a small English chalk stream

The microhabitat use of two size/age classes of fish (0 +, ≥1+) in the River Lee, based on measurements of 14 environmental variables, was studied using point abundance sampling by electrofishing over the summer and autumn of 1995. Microhabitat use by all cyprinid species (barbel Barbus barbus, minnow Phoxinus phoxinus , chub Leuciscus cephalus and gudgeon Gobio gobio ) differed between 0+ and older (≥1+) with lentic, shallow, littoral environments being important for 0+ fishes, whereas deeper, faster areas in mid-channel were important for ≥ 1 + fishes. There was more overlap in microhabitat use by 0+ juvenile cyprinids in the River Lee than in larger systems such as the River Danube (Slovakia/Hungary) and River Great Ouse (U.K.).     

Habitat use of Atlantic salmon Salmo salar parr in a dynamic winter environment: the influence of anchor‐ice dams

The effect of anchor‐ice dams on the physical habitat and behavioural responses of Atlantic salmon Salmo salar parr in a small, steep stream was investigated. Anchor‐ice dams formed periodically, leading to a dynamic winter environment as the study reach alternated between riffle and walk dominated habitat. Parr demonstrated large individual variation in habitat use, utilizing most of the wetted stream width, and were generally unaffected by diel changes in the mesohabitat composition. Furthermore, parr displayed high site fidelity in areas with low embedded substrata, and demonstrated few large movements between the three mesohabitat classes present: shallow riffle, walk and pool. Findings from this study question the importance of hydraulic variables such as water depth, flow velocity and dynamic ice formation as single habitat features for juvenile stream salmonids during winter and emphasize the importance of access to substratum cover.     

Spring and summer microhabitat use by Schlegel’s Japanese gecko,Gekko japonicus (Reptilia: Squamata: Gekkonidae), in urban areas

Differential microhabitat use may be beneficial to achieving fitness in seasonally variable environmental conditions. To explore whether the microhabitat use of the nocturnal Schlegel’s Japanese gecko, Gekko japonicus, varies seasonally and depends on juvenile, male, and female reproductive groups, we investigated five categorical and five quantitative measure variables of microhabitat use in a wild population both in spring and summer. Most geckos were found on white, vertical planes of concrete and plastered brick walls. None of the categorical variables (type of location, substrate, substrate color, light source, and refuge) significantly differed according to season or group, while substrate temperature and irradiance at the location where geckos were observed and the distance from the nearest potential refuge were significantly greater in summer than in spring. The quantitative measure variables did not differ among the reproductive groups. These results suggest that G. japonicus seasonally adjusts its microhabitat use mainly in terms of quantitative measure variables rather than categorical variables.