Production and outmigration of young-of-year northern pike Esox lucius from natural and modified waterways connected to Lower Green Bay,Wisconsin

Production and outmigration of young-of-year (YOY) northern pike from natal sites in Lower Green Bay, WI, USA, were documented over three consecutive years (2013–2015). We tested the hypothesis that spawning success and outmigration characteristics of YOY northern pike would vary among natural and anthropogenically modified habitats. Sixteen focal study locations were surveyed, including a restored natural wetland, agricultural drainage ditches, a flooded forested wetland and several unimpounded tributaries. We collected 1469 YOY northern pike with most individuals (N = 1163) originating from a flooded forested wetland on the east shore. Most sites produced YOY in all years (range N = 2–1145 individuals among study years). Outmigration ranged between 1 and 40 days during 2013–2015. Greater production and extended outmigration times occurred at most sites in 2014 (range 17–40 days) when the region experienced a late spring with heavy precipitation. In contrast, the lowest production and shortest outmigration period occurred at most sites in 2015 (range 14–23 days) when environmental conditions reflected regional averages. Outmigration began nearly 3 weeks earlier in 2015 (5/8) than in other study years (8 June 2013 and 25 May 2014). Total length (TL) of outmigrating northern pike ranged between 17 and 138 mm. Total length of YOY was significantly different among sites in 2013 and 2014, with the smallest fish (17 mm TL) outmigrating from agricultural ditches in both years. There were no significant variations in size among sites in 2015 (range 21–95 mm TL). Our results indicate significant variation in YOY northern pike outmigration characteristics within Lower Green Bay that may reflect the interplay between adult spawning site selection and annual weather patterns. Our findings highlight the importance of quantifying overlooked habitats in regions of mixed development.     

Flood tolerance and the distribution of Iva frutescens across New England salt marshes

Summary Tidal flooding is widely believed to be an important determinant of marsh plant distributions but has rarely been tested in the field. In New England the marsh elder Iva frutescens often dominates the terrestrial border of salt marshes and we examined its flood tolerance and distribution patterns. Marsh elders only occur at elevations where their roots are not subject to prolonged water table flooding. Consequently they are found on the terrestrial border of marshes and at lower elevations associated with drainage ditches and locally elevated surfaces. Marsh elders transplanted to elevations lower than they normally occur died within a year with or without neighbors and greenhouse tests revealed that I. frutescens is much less tolerant of flooded soil conditions than plants found at lower marsh elevations. We also manipulated the water table level of field plots and found that increasing or decreasing water table drainage led to enhanced and diminished I. frutescens performance, respectively. Our results demonstrate the importance of water table dynamics in generating spatial patterns in marsh plant communities and provide further evidence that supports the hypothesis that the seaward distributional limits of marsh plant populations are generally dictated by physical processes.     

Spatial variability of the soil seed bank in a heterogeneous ephemeral wetland system in semi-arid Australia

Soil seed banks are an important component of plant community diversity in ephemeral wetlands, allowing many species to persist through unpredictable periods of flood and drought. Spatial variation of extant vegetation in such habitats commonly reflects patterns of flood history and often varies predictably between broadly differing hydro-geomorphic habitat types. Here we investigate whether spatial variation of soil seed banks is similarly controlled by fluvial processes at this scale. Results are presented from a seedling emergence trial using samples collected from a range of habitat types, and at different scales within these, in the ephemeral Narran Lakes system in semi-arid Australia. Composition and structure of soil seed banks varied significantly between habitat types reflecting broad differences in flood frequency. As predicted, germinable seed abundance was found to be highest in intermediately flooded habitats. Variability in soil seed bank composition at a local scale was also found to be influenced by hydrology with greater spatial heterogeneity evident in the river channel as well as amongst the least frequently inundated riparian and floodplain habitats.     

Predation of Northern Pike (Esox lucius L.) Eggs: A Possible Cause of Regionally Poor Recruitment in the Baltic Sea

Northern pike (Esox lucius) spawning habitat and egg mortality were studied in three spawning areas in 2001 along the Swedish coast of the Baltic proper: the Blekinge Archipelago, Kalmar Sound and coastal freshwater streams. Spawning peaked during the last week of April in streams, at temperatures ranging from 7.7 to 8.9 °C and during the first week of May in brackish waters, at temperatures ranging from 8.9 to 13.8 °C. Spawning occurred in shallow waters, at depths between 0.2–1.5 m, but generally most of the spawn was found in the shallowest areas. In streams, eggs were mainly attached to emersed vegetation, while in brackish sites pike eggs were well scattered among flooded emersed plants, submersed plants and filamentous algae. Mean egg density varied between 469–1829 m^–2 with the lowest density observed in Kalmar Sound. The calculated egg loss occurring from approximately one day after spawning to one day before hatching ranged from 41±7% in coastal streams to 67±6% in the Blekinge Archipelago and 100% in Kalmar Sound. The significant removal of eggs from spawning sites in Kalmar Sound and Blekinge was most likely due to predation from several fish species. In situ observations and stomach analyses suggested that many pike eggs in Kalmar Sound were lost to the three-spined stickleback (Gasterosteus aculeatus), a species that presently dominate the littoral small fish community. This study therefore suggests that egg predation by sticklebacks and other fishes may be a possible cause of the reported poor recruitment of coastal pike populations in the Kalmar Sound region.     

The influence of substrate type on macroinvertebrate assemblages within agricultural drainage ditches

Artificial drainage ditches are common features in lowland agricultural catchments that support a wide range of ecosystem services at the landscape scale. Current paradigms in river management suggest activities that increase habitat heterogeneity and complexity resulting in more diverse floral and faunal assemblages; however, it is not known if the same principles apply to artificial drainage ditch systems. We examined the effects of four artificial substrates, representing increasing habitat complexity and heterogeneity (bricks, gravel, netting and vegetation), on macroinvertebrate community structure within artificial drainage ditches. Each substrate type supported a distinct macroinvertebrate community highlighting the importance of habitat heterogeneity in maintaining macroinvertebrate assemblages. Each substrate type also displayed differing degrees of community heterogeneity, with gravel communities being most variable and artificial vegetation being the least. In addition, several macroinvertebrate diversity metrics increased along the gradient of artificial substrate complexity, although these differences were not statistically significant. We conclude that habitat management practices that increase habitat complexity are likely to enhance macroinvertebrate community heterogeneity within artificial drainage channels regardless of previous management activities.

     

Flooding ecology of voles, mice and shrews: the importance of geomorphological and vegetational heterogeneity in river floodplains

Since voles, mice and shrews are important animals in food chains of river floodplains, there is a need for data on their spatial and temporal distribution in periodically flooded areas. During a live trapping study between two successive floods in an embanked river floodplain, the ’Afferdensche en Deestsche Waarden (ADW)’, six species were frequently observed, viz,Microtus arvalis (Pallas, 1778),Clethrionomys glareolus (Schreber, 1780),Sorex araneus (Linnaeus, 1758),Crocidura russula (Hermann, 1780),Micromys minutus (Pallas, 1771) andApodemus sylvaticus (Linnaeus, 1758). Ungrazed rough herbaceous vegetation appeared to be rich in numbers and species, whereas no spoors of small mammals were observed in large parts of the ADW floodplain (eg bare substrates and maize fields). Vegetation structure seemed to be very important in guiding the recolonisation process after flood events. Throughout the year the highest numbers of small mammals were captured on and near the non-flooded elevated parts functioning as refugia during inundation. Poor habitat connectivity, sparseness of non-flooded recolonisation sources and small numbers of survivors led to slow recolonisation. The time between two successive floods (eight months) was not long enough for entire recolonisation of ADW. Small mammal densities at more than 30 m from the non-flooded areas were always lower than in non-flooded areas.     

Comparative ecology of the African pike, Hepsetus odoe, and tigerfish, Hydrocynus forskahlii, in the Zambezi River floodplain

The ecology of sympatric African pike, Hepsetus odoe (Hepsetidae), and tiger fish, Hydrocynus forskahlii (Characidae), were compared during high (May-August) and falling water (September-December) conditions in the Upper Zambezi R. drainage of Zambia. Both species were common in the central and southern regions of the river and associated floodplain, and Hydrocynus was common in the northern region in swift flowing tributaries where Hepsetus was rare. Hepsetus inhabited vegetated environments of river backwaters, lagoons, and sluggish tributaries, whereas Hydrocynus occupied the open water of the main river channel almost exclusively. During the period of annual flooding, juveniles of both species coexist in flooded savanna regions. Size distributions of adult Hydrocynus and Hepsetus changed relatively little between high and low water conditions. Stomach contents analysis indicated that adult size classes of both species are almost entirely piscivorous, and both show diet shifts with changes in size. Only very small seasonal diet shifts were noted. Approximately 50% of the diet of Hepsetus consisted of haplochromine cichlid fishes, but also included large numbers of tilapine cichlids and mormyrids, Hydrocynus consumed primarily cichlid fishes, but also consumed large percentages of Hepsetus and small characid fishes. Small size classes of Hepsetus fed heavily on small machokid catfishes (Synadontis spp.) and later shifted to a diet of cichlids and mormyrids, and small Hydrocynus preyed heavily on Barbus spp. (Cyprinidae), small characids, and mormyrids. Ratios of prey length-predator length averaged approximately 0·26 for Hydrocynus and nearly 0·40 for Hepsetus. The large potential for food resource competition appears not to be realized due to a very high degree of habitat partitioning between larger size classes of the two species. At the interface between river backwaters and channel habitats, Hydrocynus is a significant predator of Hepsetus, a factor that should further restrict the occurrence of the latter in open areas of the main channel.     

Short-term colonisation by macroinvertebrates of cobbles in main channel and inundated stream bank habitats

In small, forested catchments, short rainfall events cause relatively rapid increases in river discharge that inundate previously dry streamside habitats and last for several days. We examined the colonisation and use of such newly inundated habitats by macroinvertebrates in the riffles of a cobble-dominated river over a 4-day period. First we simulated inundation by adding dry river rocks to the main channel of the stream. Second, we observed colonisation of streamside rocks that were inundated following rainfall and subsequent natural spate. Macroinvertebrates colonised rocks in both habitats within 24 h, yet overall macroinvertebrate abundance did not change significantly over the subsequent 3 days. The abundances of common taxa were similar on mid-channel and stream bank rocks but each habitat contained a unique suite of uncommon taxa. Taxon richness was significantly greater on the stream bank rocks, which we attribute to the non-selective colonisation of fauna to avoid high flows in the main channel during the spate. Our study shows that fauna use the stream bank habitat as a haven from high flows in the main river channel, but the fate of the animals colonising this habitat is uncertain. Handling editor: D. Dudgeon     

Plant diversity in a water-meadow landscape: the role of irrigation ditches

Species-rich, extensively managed grasslands are among the most threatened ecosystems in Europe. The traditional technique of meadow irrigation, formerly practised in large parts of Europe, may be a viable management option that meets both ecological and economical objectives. While studies on plant diversity of the meadow matrix exist, the role of other landscape components for biodiversity conservation is unknown. We quantify the role of irrigation and drainage ditches compared with field paths, and analysed the local and landscape plant species composition and diversity in a water-meadow landscape. The meadows are located in the river Queich catchment (Upper Rhine valley, Germany). We recorded plant species cover on 18 meadows, adjacent ditches and field paths and analysed alpha, beta and gamma diversity within and among these landscape components. Irrigation and drainage ditches were more species rich than meadows and more heterogeneous in their species composition compared with meadows and paths. Ditches contributed one-third of the landscape’s plant species numbers, habitat for wetland species and refuges for high nature value grassland species. Fertilization of the adjacent meadow had no negative impact on the ditch diversity, while well-maintained ditches were more plant species rich than ditches filled with sediments. Traditional flood meadow irrigation should be taken into account when sustainable grassland management techniques are discussed that meet economical and ecological needs. A major contribution to landscape richness arises from the ditch structures as crucial part of the traditional irrigation technique.     

Patterns of bird abundance and habitat use in rice fields of the Kanto Plain, central Japan

Rice fields, the most widespread cropland in Japan, provide important habitat for birds, but few studies have examined bird communities that are influenced by agriculture in rice fields. I studied the seasonal pattern of bird abundance and their habitat preferences in terms of agricultural habitats in the rice fields of the central Kanto Plain, central Japan. In total, 19 waterbird species and 31 landbird species were recorded over the study year. Waterbird occurrence was largely restricted to the cultivation season (i.e. the flooded season, May–August), with maximum abundance in August. Rice fields dried up during winter and supported few waterbirds except for irregular occurrences of little egrets (Egretta garzetta) and common snipes (Gallinago gallinago), which selectively used ditches with shallow water. Landbird abundance increased after the start of cultivation (May) to August, but more birds were attracted to the rice fields in midwinter (around January). For both waterbirds and landbirds, most species preferred levees and fallow grass fields, but avoided fields with rice vegetation. Unplowed fields after harvest were preferred by several species including skylarks (Alauda arvensis), while plowed fields were less attractive to most species. These results suggest the need for advanced agricultural practices to include improvement in habitat quality for birds.     

Pallid sturgeon seasonal habitat selection in a large free-flowing river,the lower Mississippi River

Pallid sturgeon Scaphirhynchus albus (Forbes & Richardson, 1905, Bulletin of the Illinois State Laboratory of Natural History, 1905, 7, 37) are an endangered riverine sturgeon native to the Mississippi and Missouri rivers, and declining numbers have been attributed to multiple stressors, including habitat loss and alteration. The lower Mississippi River provides a useful context to assess pallid sturgeon habitat selection because, although altered for flood control and navigation, it provides a free-flowing system with a diversity of habitats and a minimally altered hydrograph. A discrete choice model of data collected year-round from two reaches for 3–5 years revealed changes in habitat selection across water temperatures and river stages representative of seasonal variation in habitat for 116 telemetry-tagged pallid sturgeon. Natural bank, island tip, and secondary channel were positively selected and main channel, although frequently used, was avoided. The degree of selection varied among river stages, water temperatures, and reaches. Habitat selection appears to be strongly influenced by preference for locations with moderate depth (median 11.7 m; lower and upper quartiles 8.1 m and 16.3 m) and moderate current velocity (median 0.9 m/s; lower and upper quartiles 0.7 m/s and 1.2 m/s).     

Habitat use by three Acrocephalus warblers in an intensively used farmland area: the influence of breeding patch and its surroundings

Habitat use by the sedge warbler Acrocephalus schoenobaenus, reed warbler A. scirpaceus and marsh warbler A. palustris was studied during 1998–2000 in an intensively cultivated agricultural landscape in western Poland. The birds occupied mid-field marsh patches (0.05–9.84 ha) and drainage ditches. Using logistic regression models, habitat preferences for particular patch type, characteristics of breeding patch vegetation and surrounding crop type were investigated. All habitat measurements were done within 50-m radius circles around breeding territory centers. The most important factors that influenced species distributions were the proportions of particular habitats within patch area and the type of surrounding crops. Sedge and reed warblers preferred areas with a high proportion of reeds and meadows. Marsh warblers avoided emergents other than reeds, and favored herbaceous vegetation and bushes. Open water areas positively affected reed warbler distribution. Crop type had a significant influence on within-year territory distribution and changes in between-year occupation pattern. In general, birds preferred to settle near fields of oil seed rape, while root crops and spring cereals were avoided. Breeding patch type and structure of reedbeds had relatively little influence on the distribution of breeding territories. The results obtained show that the surrounding landscape may significantly influence habitat use of species breeding in habitat islands in farmland. Depending on their structure and food resources, crops might have different value to the birds.     

Influence of modern irrigation,drainage system and water management on spawning migration of mud loach, <Emphasis Type="Italic">Misgurnus anguillicaudatus</Emphasis> C.

We investigated the influence of human activities on the spawning migration of the mud loach, Misgurnus anguillicaudatus. Mud loaches migrate from rivers to paddy fields for spawning. In this study, the number of adult loaches in paddy fields showed a peak in late May and rapidly decreased in July. In early July, water is discharged from paddy fields in order to allow the fields to dry for a few weeks, and water is again supplied later. The spawning season of the loaches probably spans from mid May to August; this was concluded by observing physiological indicators such as the gonad somatic index, oocyte maturity and serum levels of testosterone, estradiol-17β and 17α, 20β-dihydroxy-4-pregnen-3-one. When the loaches mature, they migrated to paddy fields if they could swim upward through the drainage ditches. However, the drainage ditches of modern paddy fields were reconstructed to deepen the water levels. The artificial drought of the rice culture management led to a discharge of water and loaches from the paddy fields during their spawning season. These results indicate that modern rice cultivation causes obstruction of the migration route and loss of spawning grounds; consequently, loaches use limited space and period of the paddy field for their spawning.     

Immediate and longer-term effects of managed flooding on floodplain invertebrate assemblages in south-eastern Australia: generation and maintenance of a mosaic landscape

1. We compared assemblages of ground‐active, terrestrial beetles and spiders from different areas of river red gum Eucalyptus camaldulensis floodplain forest in subhumid, south‐eastern Australia before and for 2 years following a managed flood to determine whether the Flood Pulse Concept is an appropriate ecological model for this regulated, lowland river‐floodplain system. 2. Immediately following flooding, the abundance, species richness and biomass of beetles were greatest at sites that had been inundated for the longest period (approximately 4 months). The abundance, species richness and biomass of spiders were not reduced at sites that were flooded for 4 months compared with unflooded or briefly flooded areas. Sites recently flooded for several months had high densities of predatory, hygrophilic beetles (Carabidae) and spiders (Lycosidae). 3. Over the 2 years following the flood, beetles generally were more abundant at sites that had been inundated for longer. At all sampling times, the species richness of beetles at sites increased with the length of time sites were inundated, even before the flood. Neither the abundance nor species richness of spiders was related to duration of flooding. 4. The structure of beetle and spider assemblages at sites that were flooded for different lengths of time did not appear to converge monotonically over the 2 years after the flood. 5. Managed flooding promotes diversity of beetles and spiders both by providing conditions that create a ‘pulse’ in populations of hygrophilic specialists in the short term, and by creating subtle, persistent changes in forest‐floor conditions. Despite its monotypic canopy, river red gum floodplain forest is a habitat mosaic generated by differing inundation histories.     

Spatially explicit model predicting the spawning habitat and early stage mortality of Northern pike (Esox lucius) in a large system: the St. Lawrence River between 1960 and 2000

Discharge fluctuations in the St. Lawrence River (Canada) affect reproduction habitat for Northern pike (Esox lucius Linnaeus). We developed a spatially explicit model for that large-scale river system to predict spawning habitat surfaces available for egg deposition and the potential mortality by dewatering occurring during the embryonic-larval stages. The spatial model used simulated current velocity, wetland type and water temperature at a high spatial resolution over the entire fluvial St. Lawrence River, Canada. Those three variables were integrated into a habitat suitability index (HSI) and weighted according to the literature. A new thermal preferendum curve, based on a field experiment, was included in the HSI, reflecting that the probability of observing pike spawners in a given area increased with temperature. The reproduction chronology was predicted every year with an original model based on air temperature in order to reconstitute the historic habitat surfaces for the period 1960–2000. The results revealed that discharge had a substantial effect on both suitable habitat for egg deposition and potential mortality following dewatering. The best and the largest spawning habitats were identified, as well as the most limiting regions in the river. The present findings have already been used to prepare a new discharge regulation plan for the Lake Ontario–St. Lawrence River system. Guest editors: J. M. Farrell, C. Skov, M. Mingelbier, T. Margenau & J. E. Cooper International Pike Symposium: Merging Knowledge of Ecology, Biology, and Management for a Circumpolar Species     

Modelling a pike (Esox lucius) population in a lowland river using a cellular automaton

Cellular automata (CAs) allow for transparent modelling of complex systems based on simple transition rules and are flexible in incorporating individual differences and local interactions. They may therefore be particularly suited to answer river management questions that could not be addressed by existing habitat suitability models, such as the optimal distance between spawning grounds. This study explores the usability of CAs for spatio-temporal modelling of a pike population to support river management. Specifically, we evaluated the usability of the CA model by analyzing its sensitivity to three model parameters: the number of pike in the grid, the initial pike distribution and the grid resolution. The model includes habitat characteristics and basic expert knowledge on the ecology of pike and was tested on a 10 km stretch of the river Yser in Flanders (Belgium). Simulation results showed that the model converged to a realistic pike distribution over the study area only at high pike density and low grid resolution, irrespective of the initial pike distribution. Pike density and grid resolution affected the sensitivity to the initial pike distribution in the grid. Specifically, the sensitivity was high at low pike density and high grid resolution, and absent when pike density was high. This analysis indicated that initial conditions and cell size may have a severe impact on the model output, illustrating the importance of firstly analyzing this impact before conducting further analyses. Depending on the outcome of such analyses, CAs can be a promising modelling technique to evaluate and predict the effect of river restoration on pike populations.     

Characterization of Pallid Sturgeon (Scaphirhynchus albus) Spawning Habitat in the Lower Missouri River

Acipenseriformes (sturgeons and paddlefish) globally have declined throughout their range due to river fragmentation, habitat loss, overfishing, and degradation of water quality. In North America, pallid sturgeon (Scaphirhynchus albus) populations have experienced poor to no recruitment, or substantial levels of hybridization with the closely related shovelnose sturgeon (S. platorynchus). The Lower Missouri River is the only portion of the species’ range where successful reproduction and recruitment of genetically pure pallid sturgeon have been documented. This paper documents spawning habitat and behavior on the Lower Missouri River, which comprises over 1,300 km of unfragmented river habitat. The objective of this study was to determine spawning locations and describe habitat characteristics and environmental conditions (depth, water velocity, substrate, discharge, temperature, and turbidity) on the Lower Missouri River. We measured habitat characteristics for spawning events of ten telemetry-tagged female pallid sturgeon from 2008–2013 that occurred in discrete reaches distributed over hundreds of kilometers. These results show pallid sturgeon select deep and fast areas in or near the navigation channel along outside revetted banks for spawning. These habitats are deeper and faster than nearby river habitats within the surrounding river reach. Spawning patches have a mean depth of 6.6 m and a mean depth-averaged water-column velocity of 1.4 m per second. Substrates in spawning patches consist of coarse bank revetment, gravel, sand, and bedrock. Results indicate habitat used by pallid sturgeon for spawning is more common and widespread in the present-day channelized Lower Missouri River relative to the sparse and disperse coarse substrates available prior to channelization. Understanding the spawning habitats currently utilized on the Lower Missouri River and if they are functioning properly is important for improving habitat remediation measures aimed at increasing reproductive success. Recovery efforts for pallid sturgeon on the Missouri River, if successful, can provide guidance to sturgeon recovery on other river systems; particularly large, regulated, and channelized rivers.     

The impact of catch-and-release angling on short-term behaviour and habitat choice of northern pike (<Emphasis Type="Italic">Esox lucius</Emphasis> L<Emphasis Type="Italic">.</Emphasis>)

In the northern hemisphere, pike (Esox lucius Linnaeus) is one of the most important recreational fisheries resources, and regulatory or voluntary catch-and-release angling is common. No information is available about the potential sublethal impacts on pike that catch-and-release fishing may cause, such as behavioural alterations and changes in habitat choice after release. Radio telemetry with N = 20 pike was used to test the hypothesis that fish modify behaviour by reducing movement as a reaction to a catch-and-release event in a previously unfished, slightly eutrophic lake, having an area of 25 ha and located in northeastern Germany. During a 7-month tracking period, activity of pike was monitored for consecutive 24 h every week. Minimum displacement per hour (m) and distance to shore (m) were significantly lower upon the first post release tracking compared to tracking before the capture. Two tracking events after capture, both movement and distance to shore were similar to those measured during pre-angling. There were no significant relations between the change in movement and distance to shore and size of pike. In terms of habitat choice, pike significantly selected for reed and avoided the pelagic area over the whole study period that was not influenced by catch-and-release angling. The results indicated that catch-and-release induces short-term behavioural alterations in pike, probably explained by physiological disturbances and facilitated by evolved anti-predation behaviours. Such alterations, however, seem to be of short duration and reversible suggesting sublethal catch-and-release impacts on pike behaviour are limited. Guest editors: J. M. Farrell, C. Skov, M. Mingelbier, T. Margenau & J. E. Cooper International Pike Symposium: Merging Knowledge of Ecology, Biology, and Management for a Circumpolar Species     

Zooplankton ecology and trophic resources for rearing native fish on an agricultural floodplain in the Yolo Bypass California,USA

Out-migrating juvenile Chinook Salmon Oncorhynchus tshawytscha in California’s Central Valley lack frequent access to historical off-channel habitats such as floodplains. However, many regions have agricultural floodplains that may provide habitat value to young salmon. To determine the suitability of agricultural floodplain, this study tested whether winter-inundated rice fields in a historic flood basin in California’s Central Valley could provide adequate food resources for rearing juvenile Chinook Salmon. We examined the suitability of flooded rice fields for three post-harvest habitat types: stubble, fallow, and disced. Soil emergent and pelagic zooplankton communities were compared to determine colonization sources. Winter-inundated rice fields had high densities of zooplankton, which increased over the course of the study. Daphnia pulex, a large-bodied cladoceran and an excellent forage species of juvenile Chinook Salmon, was abundant in our study. Cladocerans colonized via source water while ostracods likely colonized from a soil egg bank. Overall, there was no discernable effect of habitat type on zooplankton community structure or density, except for D. pulex. Our results suggest that flooded agricultural rearing habitat can support juvenile Chinook Salmon based on high densities of zooplankton and other suitable habitat conditions have the potential to support a robust aquatic food web.