Hydrolytic activity in the genusSchizosaccharomyces lindner

A total of 22 strains of known species of the genusSchizosaccharomyces Lindner were evaluated by numerical taxonomy based on conventional identification tests. The results of numerical taxonomy were supplemented by a determination of activity of extracellular hydrolytic enzymes, especially 1,3-β-D-glucanase, RNAase and DNAase. All the strains tested were capable of utilizing the 1,4-capable of utilizing the 1,4-α-D-glucan tamarind. Study of life cycles of these organisms showed that extracellular hydrolytic enzymes were present mainly at the time of maturation of asci and release of their walls. Strains forming four-spore asci could be comprised in the single speciesSchizosaccharomyces pombe Lindner as two varieties:S. pombe var.pombe andS. pombe var.malidevorans. The two varieties differ in maltose fermentation. Urease is produced by all strains irrespective of the life cycle phase. A number of hydrolytic enzymes are not produced by the genusSchizosaccharomyces (e.g. amylolytic enzymes) despite the fact that oligomers of the maltose type are utilized. Species of the genusSchizosaccharomyces lack also xylanase, cellulases, mannase, and are incapable of degrading carrageenan and acid polysaccharides.     

The isolation of protoplasts of the fission yeastSchizosaccharomyces byTrichoderma viride and snail enzymes

The formation of protoplasts of the fission yeastsSchizosaccharomyces pombe andSchizosaccharomyces versatilis after the combined application of snail enzymes andTrichoderma viride enzymes in an osmotic stabilizer (0.4m KC1, pH 5.5) was studied by light and electron microscopy. The effect of the enzymes used leads during 30 min to the formation of 100% protoplast population. Using electron microscopy no original walls or wall remnants were detected in the suspension of protoplasts. Protoplasts are viable and in liquid nutrient medium they regenerate cell walls and revert into normal cells. Such a protoplast population may be useful for biochemical study of protoplast metabolism by quantitative methods as well as for the chemical study of regenerating cell walls.     

Cell-wall structure,mitosis and urease activity in Torulopsis species of high GC content

Five Torulopsis species, in which, characteristically, the mean molar percentage of guanine plus cytosine of the DNA bases (GC content) is above 50%, were examined to determine their cell-wall structure; the mode of bud formation; course of mitosis and their urease activity. The two urease-negative species, T. gropengiesseri (% GC 57.1) and T. silvatica (% GC 56.3), were found to possess affinitive properties which characterize perfect ascomycetous yeast species. In the urease-positive species, T. fujisanensis (% GC 65.0–66.1), T. ingeniosa (% GC 55.6) and T. philyla (% GC 63.9), there appeared to be a correlation between pronounced urease activity and the affinitive properties which characterize perfect basidiomycetous yeast species. Pronounced urease activity has, however, also been found in the ascomycetous species Schizosaccharomyces pombe. Consequently neither high GC ratios nor the presence of urease activity when considered individually, can be taken as reliable criteria when attempting to establish the affinity of yeasts the perfect states of which are not known, with the Basidiomycetes. A strain of the ascomycetous species Sclerotinia trifoliorum was examined by electron microscopy for comparative purposes.     

A protective role of methionine-R-sulfoxide reductase against cadmium in Schizosaccharomyces pombe

The Schizosaccharomyces pombe cells harboring the methionine- R-sulfoxide reductase (MsrB)-overexpressing recombinant plasmid pFMetSO exhibited better growth than vector control cells, when shifted into fresh medium containing cadmium chloride (abbreviated as Cd). Although both groups of cells contained enhanced reactive oxygen species (ROS) and nitric oxide (NO) levels in the presence of Cd, ROS and NO levels were significantly lower in the S. pombe cells harboring pFMetSO than in vector control cells. Conversely, the S. pombe cells harboring pFMetSO possessed higher total glutathione (GSH) levels and a greater reduced/oxidized GSH ratio than vector control cells under the same conditions.     

Crystal structure of the eukaryotic translation initiation factor 2A from Schizosaccharomyces pombe

The eukaryotic translation initiation factor 2A (eIF2A) was identified as a factor that stimulates the binding of methionylated initiator tRNA (Met-tRNA _i ^Met ) to the 40S ribosomal subunit, but its physiological role remains poorly defined. Recently, eIF2A was shown to be involved in unconventional translation initiation from CUG codons and in viral protein synthesis under stress conditions where eIF2 is inactivated. We determined the crystal structure of the WD-repeat domain of Schizosaccharomyces pombe eIF2A at 2.5 Å resolution. The structure adopts a novel nine-bladed β-propeller fold. In contrast to the usual β-propeller proteins, the central channel of the molecule has the narrower opening on the bottom of the protein and the wider opening on the top. Highly conserved residues are concentrated in the positively-charged top face, suggesting the importance of this face for interactions with nucleic acids or other initiation factors.     

Isoenzyme pattern of malate dehydrogenase during respiratory derepression in Schizosaccharomyces pombe

One isoenzyme of malate dehydrogenase with an isoelectric point of 6.4 was found in glucose-repressed cells of Schizosaccharomyces pombe. During respiratory derepression the activity of this isoenzymes decreased rapidly in vivo. In the course of this inactivation two new forms of malate dehydrogenase with isoelectric points of 6.0 and 5.7 appeared. It has been found that these two enzymic forms disappeared 4 h after the exhaustion of glucose; probably they are degradation products of the isoenzyme present in glucose-repressed cells. Fully derepressed cell of this fission yeast contain one isoenzyme of malate dehydrogenase with an isoelectric point of 5.3. The synthesis of this isoenzyme is initiated at glucose concentrations below 1.5 g/l.     

Transformation of the Golgi apparatus in the cell cycle of a green alga,Micrasterias americana

Summary Transformation of the Golgi apparatus in the stages of the cell cycle ofMicrasterias americana was investigated with an electron microscope. In the resting cell, dictyosomes consisted of eleven cisternae, the distal-most cisterna of which was partially network-shaped. During the developmental stages of the new half cell followed by nuclear division, dictyosomes produced dark vesicles and large vesicles at the peripheries of the distal cisternae, thus diminishing the diameter of the distal cisternae and their numbers. Finally, dictyosomes with six or seven cisternae of small diameter were found when the new half cell reached to full size as a mother half cell. At this stage, the small dictyosomes produced flat vesicles. Thereafter, dictyosomes recovered the size and number of their constituent cisternae, being supplied a membrane and substrate from the primary vesicles. Lysosomes divided the dictyosomes in two, and these divided dictyosomes seemed to regenerate in one case and to disorganize in another. The occurrence of large vesicles was also confirmed using the negative staining method in growing cells.     

Use of biochemical parameters for the individuation of genetic variants: Study of the relative efficiency of some parameters determined on a number of mutants of Schizosaccharomyces pombe with altered acid phosphatase activity

About 160 mutants of Schizosaccharomyces pombe with altered activity of the nonspecific acid phosphatase located on the cell surface were isolated. The following kinetic parameters were determined by automatic techniques on the mutants: (1) residual activity vs. wild type, (2) K _m , (3) V _max , (4) optimal pH, (5) percent pH curve. The ability of the various parameters to discriminate between genetic variants was investigated by applying to the results a suitable statistical quantitative index, R (resolving power), previously defined by us. The last two parameters had least resolving power, whereas the first three had about equal resolving power. This was found to be consistent with current concepts of enzyme and protein structure. These results could serve as guidelines in the choice of biochemical parameters for the study of polymorphisms in systems not previously investigated. Moreover, they provide information about the relative effects on the various parameters of mutations which give rise to the genetic variants and also about the molecular nature of mutations occurring at different loci involved in the control of acid phosphatase in S. pombe.     

Structure ofCyanidium caldarium

The structure of cell organelles inCyanidium caldarium was investigated with an electron microscope. Chloroplasts had 8–10 unstacked thylakoids within the double membraned envelope. Dictyosomes were constructed with 5–7 cisternae of 0.5–0.8 μm in diameter. Mitochondria, endoplasmic reticulum, microbodies, vacuoles, nuclear membranes and ribosomes all had the typical shape seen in eucaryotic cells. No evidence was found to indicate thatCyanidium caldarium is a special organism. Instead, the present observations indicated that it is a red alga.     

Structure,differentiation, and multiplication of Golgi apparatus in fungal hyphae

Summary Golgi apparatus in subapical regions of hyphae consist of paranuclear dictyosomes with 4–5 cisternae each. Transverse and tangential sections provide ultrastructural evidence for a three-dimensional architectural model of the Golgi apparatus and a stepwise mechanism for dictyosome multiplication. The dictyosomes are polarized, with progressive morphological and developmental differentiation of cisternae from the cis to the trans pole. Small membrane blebs and transition vesicles provide developmental continuity between the nuclear envelope and the adjacent dictyosome cisterna at the cis face. Cisternae are formed as fenestrated plates with extended tubular peripheries. The morphology of each cisterna depends on its position in the stack, consistent with a developmental gradient of progressive maturation and turnover of cisternae. Mature cisternae at the trans face are dissociated to produce spheroid and tubular vesicles. Evidence in support of a schematic sequence for increasing the numbers of dictyosomes comes from images of distinctive and unusual forms of Golgi apparatus in hyphal regions where nuclei and dictyosomes multiply, as follows: (a) The area of the nuclear envelope exhibiting forming-face activity next to a dictyosome expands, which in turn increases the size of cisternae subsequently assembled at the cis face of the dictyosome. (b) As subsequent large cisternae are formed and mature as they pass through the dictyosome, an entire dictyosome about twice normal size is built up. The number of cisternae per stack remains the same because of continuing turnover and loss of cisternae at the trans face, (c) This enlarged dictyosome becomes separated into two by a small region of the nuclear envelope next to the cis face that acquires polyribosomes and no longer generates transition vesicles, (d) As a consequence, assembly of new dictyosomes is physically separated into two adjacent regions, (e) As.the enlarged cisternae are lost to vesiculation at the trans pole, they are replaced by two separate stacks of cisternae with typical normal diameters, (f) The net result is two adjacent dictyosomes where one existed previously. Dictyosome multiplication is thus accomplished as part of the normal developmental turnover of cisternae, without interrupting the functioning of the Golgi apparatus as it continues to produce new secretory vesicles from mature cisternae at the trans face. Coordination of Golgi apparatus multiplication with nuclear division ensures that each daughter nucleus receives a complement of paranuclear dictyosomes.     

Predicted effects of increasing salinity on the crustacean zooplankton community of Pyramid Lake,Nevada

Since 1933 the salinity of Pyramid Lake, Nevada, U.S.A., has increased 32% to nearly 5.5‰. We tested the hypothesis that further increases of 1.5 to 2 times (1.5× to 2×) its present salinity would significantly reduce species richness and alter population structures of the existing crustacean zooplankton community. Three strategies were applied: in addition to monitoring zooplankton in semicontrolled indoor microcosms at 1×, 1.5× and 2× and conducting range-finding, acute, and chronic salinity bioassays, the present zooplankton community of Walker Lake (2×) was compared with that existing in Pyramid Lake (1×). Ceriodaphnia quadrangula and Diaphanosoma leuchtenbergianum, both collected from Pyramid Lake, were lacking in Walker Lake. Populations of Cyclops vernalis were significantly lower and those of Diaptomus sicilis and Moina hutchinsoni were significantly higher in Walker Lake than in Pyramid Lake. Densities of Ceriodaphnia and Cyclops were low in microcosms at salinities > 1×. Diaphanosoma could not be maintained in microcosms, regardless of salinity. Numbers of Diaptomus and Moina in microcosms were proportional to salinity level. Short-term LC50 salinities (‰) were as follows: Diaphanosoma, 6.5; Ceriodaphnia, 7.1; Diaptomus, 13.3; Cyclops, 14.8; and Moina, 17.8. Multiple-generation, chronic bioassays were run only on Cyclops and Diaptomus. Three generations of Cyclops were produced at salinities of 4.0 to 8.5‰, but not at 9.8‰ or higher. Diaptomus was unable to complete three generations at salinities ?9.6‰. We speculate that high salinity in Walker Lake may indirectly benefit Diaptomus by negatively affecting predatory Cyclops, and benefit Moina by causing extinction of competing salinity-intolerant Diaphanosoma and Ceriodaphnia. Except for the response of Diaptomus, results from bioassays were in general agreement with results from microcosms and with field data. Untested predator-prey interactions could be responsible for the apparent discrepancy.     

NaturalMycoplasma arthritidis infection in mice

B6C3F₁ mice from a hybrid production colony frequently were serologically positive by enzyme-linked immunosorbent assay (ELISA) and consistently negative by culture forMycoplasma pulmonis. Subsequently, 162 mice were obtained and intensively studied using an expanded group of cultural procedures, ELISA, and histopathology. Lesions attributable to mycoplasma infection were not found, butMycoplasma arthritidis was isolated from 20 mice. TheM. pulmonis ELISA was positive (IgM, IgG, or both) in 113 mice. Selected sera were tested simultaneously in both theM. pulmonis ELISA and in an ELISA usingM. arthritidis antigen, and were found to be positive in both the IgM and IgG classes in both ELISAs. Thus, cross-reacting antibody was produced in mice naturally infected withM. arthritidis, confirming previous observations based on experimental infections. To our knowledge, this is the first report of naturalM. arthritidis infection in laboratory mice.     

Pyramiding Bt genes for increasing resistance of cotton to two major lepidopteran pests: Spodoptera litura and Heliothis armigera

To more effectively control two major cotton insects (cotton bollworm and Spodoptera litura) and improve the efficacy of the pest resistance management, novel transgenic plants expressing Bacillus thuringiensis Cry9C gene were generated, and gene stacking strategy was incorporated. Initially, a binary plasmid vector harboring Cry9C gene was introduced into an elite cotton cultivar Simian-3 by Agrobacterium-mediated transformation. Integration and expression of the Cry9C genes in three transgenic lines were confirmed by PCR and RT-PCR. Among these transgenic lines, T0 generation of line 16 (L-16) with normal phenotypes were selected by ELISA assays for its highest expression level of Cry9C. In T1 population of L-16, the expression level of Cry9C ranged from 29 to 45 μg/g fresh leaf. The following insect bioassays demonstrated that transgenic S3-35S::Cry9C cotton plants exhibited moderate toxicity to Heliothis armigera but strong toxicity to S. litura compared with the transgenic plants expressing Cry 1Ac gene. For incorporation of gene staking strategy, Cry9C gene and Cry 2A or Cry 1Ac were pyramided, respectively by sexual crossing. The expression of Cry9C protein in all F1 progenies had a similar level as the parent plants indicating the high heritability of Bt genes in transgenic progenies. Progenies from both Cry9C × Cry 2A and Cry9C × Cry 1Ac exhibited higher resistance to S. litura compared with their parents. Together our data demonstrated that our newly generated transgenic plants represent a reservoir of novel insect-resistant materials in cotton breeding, and the successful incorporation of gene pyramiding technology can provide a new solution of developing multiple resistance management strategies.     

Molecular evidence to reconcile taxonomic instability in mahseer species (Pisces: Cyprinidae) of India

The mahseers are an important group of fishes endemic to Asia with most species considered threatened. Conservation plans to save declining wild populations are hindered by unstable taxonomy, and detailed systematic review could form a solid platform for future management and conservation. D-loop and cytochrome c oxidase I (COI) mtDNA sequences were examined in nine mahseer species of Tor, Neolissochilus, and Naziritor. Pseudogenes amplified in a portion of the species limited the utility of the D-loop region. ABGD analysis, NJ, ML, and MP methods and genetic distance (TrN?+?I?+?G) using COI data revealed concordant species delimiting patterns. The three genera were monophyletic, separated as distinct clades (TrN?+?I?+?G 0.064 to 0.106), and Naziritor was flagged as a separate genus, distinct from Puntius (TrN?+?I?+?G 0.196). Out of seven nominal species known for Tor cogeners from India, only five were recovered with mtDNA data (TrN?+?I?+?G 0.000 to 0.037) and two species could not be distinguished with the molecular data set employed. Tor mosal, synonymized as Tor putitora, was rediscovered as a distinct species (TrN?+?I?+?G 0.031) based on its type locality. Tor mussulah was confirmed as a separate species (TrN?+?I?+?G 0.019 to 0.026). Two valid species, Tor macrolepis and T. mosal mahanadicus, were not distinct from T. putitora (TrN?+?I?+?G 0.00). The high divergence with mtDNA data failed to validate T. mosal mahanadicus as a subspecies of T. mosal (TrN?+?I?+?G 0.031). Morphological outliers discovered within the distribution range of Tor tor (TrN?+?I?+?G 0.022 to 0.025) shared the same lineage with T. putitora (TrN?+?I?+?G 0.002 to 0.005), indicating a new extended distribution of the Himalayan mahseer T. putitora in the rivers of the Indian central plateau. The findings indicate the need for integrating molecular and morphological tools for taxonomic revision of the Tor and Naziritor genera, so that taxa are precisely defined for accurate in situ and ex situ conservation decisions.     

Synthesis and characterization of iodopropyl derivatives of adenosine 3′,5′-cyclic-monophosphate: Potential affinity labels of cAMP binding sites in enzymes

The syntheses of two potential cAMP affinity lables, 1,N ⁶-(3-iodopropyleno)adenosine 3′,5′-cyclic-monophosphate and 2′-O-(2-iodo-3-hydroxypropyl) adenosine 3′,5′-cyclic-monophosphate, by a two-step chemical procedure are described. TheN ⁶- and 2′-O-allyl intermediates were prepared selectively by alkylation of cAMP in organic and alkaline aqueous solutions, respectively. Treatment of theN ⁶-allyl derivative withN-iodosuccinimide resulted in iodine addition to the double bond and cyclization to theN ¹ position of the purine ring. The iodohydrin analog was synthesized by reaction of 2′-O-allyl-cAMP with potassium iodide and thallium trichloride in acetate buffered solution. The products were isolated by column chromatography and characterized by thin-layer chromatography, elemental analysis, and ultraviolet,¹³C, and¹H NMR spectroscopy. The cAMP analogs were found to react with lysine and cysteine. Both cAMP derivatives were tested for their reaction with the low-K _m cAMP phosphodiesterase of human platelets. The ribose-substituted analog functioned as a competitive inhibitor (K _I =0.72 μM) and caused a time-dependent irreversible inactivation of the phosphodiesterase. In contrast, the purine-substituted derivative acted neither as a reversible competitive inhibitor nor as an irreversible inactivator of the enzyme. These results indicate the specificity of these potential cAMP analogs in their interaction with the phosphodiesterase.     

Response of the population size and community structure of Paenibacillus spp. to different fertilization regimes in a long-term experiment of red soil

Background and aims

Paenibacillus spp. are widely considered to impact the fertility and health of soil. The aim of this study was to evaluate how different fertilization regimes affect the population size and community structure of Paenibacillus spp. over a long period of time in red soil.

Methods

Soil samples were collected from a long-term experiment and were then analyzed using real-time PCR and PCR-DGGE. The correlation analysis, PCA and RDA were used to explore the relationships among Paenibacillus spp. population, community structure and soil properties in different treatments.

Results

The pH was seriously decreased only by the application of chemical fertilizer. The largest population of Paenibacillus spp. was found in the soil treated with organic fertilizer application, while the richest diversity was observed in the soil treated only with the chemical fertilizer. The Paenibacillus spp., Paenibacillus alkaliterrae, Paenibacillus campinasensis, and Paenibacillus xylanilyticus were found in all treatments. Paenibacillus castaneae was found in the soil treated with NPK, and Paenibacillus pabuli was specifically observed in the lime-amended treatment. Paenibacillus taichungensis and Paenibacillus prosopidis were detected in the soil treated with only chemical fertilizer. Except for the ammonium and pH, all the tested soil fertility parameters (total C, total N, nitrate, available K and available P) could significantly affect both the Paenibacillus spp. population number and diversity. The soil pH was significantly correlated with Paenibacillus spp. diversity only.

Conclusions

Our results indicate that the different long-term fertilization regimes have varied impact on both the Paenibacillus spp. population size and the diversity of the community associated with the soil properties tested. These results can help to enrich the information on the response of beneficial soil microbes to different long-term fertilization regimes.     

Possible Effects of Glyphosate on Mucorales Abundance in the Rumen of Dairy Cows in Germany

Glyphosate (N-phosphonomethyl glycine) is registered as a herbicide for many food and non-food crops, as well as non-crop areas where total vegetation control is desired. Glyphosate influences the soil mycobiota; however, the possible effect of glyphosate residues in animal feed (soybean, corn, etc.) on animal mycobiota is almost unknown. Accordingly, the present study was initiated to investigate the mycological characteristics of dairy cows in relationship to glyphosate concentrations in urine. A total of 258 dairy cows on 14 dairy farms in Germany were examined. Glyphosate was detected in urine using ELISA. The fungal profile was analyzed in rumen fluid samples using conventional microbiological culture techniques and differentiated by MALDI-TOF mass spectrometry. LPS-binding protein (LBP) and antibodies (IgG1, IgG2, IgA, and IgM) against fungi were determined in blood using ELISA. Different populations of Lichtheimia corymbifera, Lichtheimia ramosa, Mucor, and Rhizopus were detected. L. corymbifera and L. ramosa were significantly more abundant in animals containing high glyphosate (>40 ng/ml) concentrations in urine. There were no significant changes in IgG1 and IgG2 antibodies toward isolated fungi that were related to glyphosate concentration in urine; however, IgA antibodies against L. corymbifera and L. ramosa were significantly lower in the higher glyphosate groups. Moreover, a negative correlation between IgM antibodies against L. corymbifera, L. ramosa, and Rhizopus relative to glyphosate concentration in urine was observed. LBP also was significantly decreased in animals with higher concentrations of glyphosate in their urine. In conclusion, glyphosate appears to modulate the fungal community. The reduction of IgM antibodies and LBP indicates an influence on the innate immune system of animals.     

Abnormalities of blood selenium and glutathione peroxidase activity in patients with acquired immunodeficiency syndrome and aids-related complex

Severe protein-calorie malnutrition is common in patients with AIDS and could contribute to the progressive deterioration characteristic of that disease. Selenium deficiency could also have a negative impact on immune function and other organ functions vital for recovery from infectious diseases. Therefore, to assess any role for selenium in AIDS, we determined plasma and erythrocyte selenium levels and glutathione peroxidase activity in 13 patients with AIDS compared to 8 patients with AIDS-related complex (ARC) and 14 healthy controls. Plasma selenium levels were significantly reduced in AIDS patients compared to controls (p<.0001) and to ARC (p<.02). Erythrocyte selenium levels in both AIDS and ARC were also reduced compared to controls (p<.02), but not to each other. Glutathione peroxidase activity in AIDS was 28.9±1.4 U/g Hb vs 38.4±6.9 in ARC (p=NS) and 52.3±1.7 in controls (p<.0001 vs AIDS;p<.02 vs ARC). When all groups were combined, there were significant correlations between total lymphocyte count and both plasma selenium (r=.53;p<.002) and erythrocyte glutathione peroxidase activity (r=.65;p<.0001). In addition, strong correlations were noted between plasma selenium and serum albumin (r=.68;p<.0001), plasma selenium and glutathione peroxidase (r=.77;p<.0001), and glutathione peroxidase and hematocrit (r=.66;p<.0001). In AIDS or ARC, no correlations between selenium with disease duration or weight loss were present. We conclude that, in comparison to normals, patients manifesting infection with human immunodeficiency virus have evidence of selenium deficiency as determined by diminished plasma and erythrocyte levels and glutathione peroxidase activity. These abnormalities are most marked in patients with AIDS, but are also present in patients with AIDS-related complex. Selenium deficiency has important implications for the progression and pathogenesis of clinical disease in AIDS.