The impact of prehistoric agriculture and land occupation on natural vegetation

Paleoecological and paleoethnobotanical evidence from Europe and North America indicates that prehistoric human populations affected the biota by: (1) changing the dominance structure within forest communities; (2) extending or truncating the distributional ranges of both woody and herbaceous plant species; (3) providing opportunities for invasion of ruderals into disturbed areas, with their subsequent population expansions as they became weeds; and (4) changing the pattern of the landscape mosaic, especially the proportion of forested to nonforested land.     

Effects of connectivity and recurrent local disturbances on community structure and population density in experimental metacommunities

Metacommunity theory poses that the occurrence and abundance of species is a product of local factors, including disturbance, and regional factors, like dispersal among patches. While metacommunity ideas have been broadly tested there is relatively little work on metacommunities subject to disturbance. We focused on how localized disturbance and dispersal interact to determine species composition in metacommunities. Experiments conducted in simple two-patch habitats containing eight protozoa and rotifer species tested how dispersal altered community composition in both communities that were disturbed and communities that connected to refuge communities not subject to disturbance. While disturbance lowered population densities, in disturbed patches connected to undisturbed patches this was ameliorated by immigration. Furthermore, species with high dispersal abilities or growth rates showed the fastest post-disturbance recovery in presence of immigration. Connectivity helped to counteract the negative effect of disturbances on local populations, allowing mass-effect-driven dispersal of individuals from undisturbed to disturbed patches. In undisturbed patches, however, local population sizes were not significantly reduced by emigration. The absence of a cost of dispersal for undisturbed source populations is consistent with a lack of complex demography in our system, such as age- or sex-specific emigration. Our approach provides an improved way to separate components of population growth from organisms' movement in post-disturbance recovery of (meta)communities. Further studies are required in a variety of ecosystems to investigate the transient dynamics resulting from disturbance and dispersal.     

Dynamics of bacterial communities and qualitative evolution of heterotrophic bacteria during the growth and decomposition processes of phytoplankton in an experimental marine ecosystem

The fluctuations of the bacterial number and the qualitative composition of heterotrophic bacteria were investigated using an experimental marine ecosystem (AME) of 7001, attempting to produce Euterpina acutifrons (Dana) from a monoxenic culture of Phaeodactylum tricorntum Bohlin. During the complete cycle of the system, installation phase, algae growth phase, algae decomposition phase, the bacterial communities homeostasis was tested using aliquots of the AME, severely disturbed via amino acids enrichment. In three identical batches, the bacterial populations showed similar quantitative and qualitative evolutions which all depended on the nature (phytoplanktonic exudates or dead cells) of the carbonaceous compounds from photosynthetic origin. If bacterial communities stayed in a diversified state of organization, considering the physiological and nutritional diversity, quick evolutions were demonstrated.     

刈牧对草原植物的影响

在草原科学发展的早期 ,人们认识了重要植物的生长营养需要和生活史特性 ,对草原管理基本理论的发展起到了重要作用[1 ] 。此后 ,为了更有效地管理草原和食草家畜 ,以使刈牧对草原植物的有害影响降到最低限度 ,并维持植物和家畜的持续生产 ,人们开始将植物对刈牧响应的知识与不同的过程结合起来。70年代中期 ,随着放牧最优化假设的提出 ,植物 -食草动物相互作用的模拟研究盛况空前[2 ,3] 。这种假设认为最大植物生产力产生于最优的刈牧强度 ,而不是不刈牧的植物。但这种假设在生态学家和自然资源管理学家之间产生了许多分歧[3～ 6] 。此时 ,…     

Physiological stress in volcano rabbit Romerolagus diazi populations inhabiting contrasting zones at the Corredor Biologico Chichinautzin,Mexico

Changes in the environment are a common factor as human populations continue to increase. Wild mammals face these changes even in those places where they live under protection because protected areas borders are not hermetic. Measurements of faecal cortisol metabolites have become a useful tool for monitoring animal physiological status as they reflect stressful situations. In this study we measured faecal cortisol metabolites in volcano rabbits, Romerolagus diazi, inhabiting a natural protected area. Concentrations were compared between animals inhabiting disturbed vs. more natural sites within the general zone. Not only were faecal cortisol metabolites levels significantly higher in animals from the disturbed sites indicating potentially higher physiological stress intensities, but there was larger variation between the concentrations measured in those samples as well. These inter-individual cortisol metabolites concentrations are a potential indicator of physiological health for wildlife.     

Characteristics of bacterial communities in the Gulf of Alaska

Taxonomic diversity, physiological tolerance ranges, and nutrient utilization capabilities were determined for bacterial communities in Gulf of Alaska surface waters and sediments. Taxonomic diversity was assessed using Shannon Weaver (H) and equitability (J) indices. Physiological tolerance and nutritional versatility indices were developed to further assess the state of informational heterogeneity within the bacterial communities. The Gulf of Alaska bacterial communities were characteristically diverse; the bacterial populations in these marine ecosystems generally were eurytolerant and nutritionally versatile. The maintenance of a high degree of informational heterogeneity was found to be characteristic of these bacterial communities. It appears to be of adaptive advantage to maintain diverse populations with physiological tolerances whose ranges exceed those experienced within the natural habitat, and for the bacterial communities to possess a high degree of nutritional versatility within these marine ecosystems.     

Plant response strategies to stress and disturbance: the case of aquatic plants

The environmental factors controlling the establishment and development of plants in different ecosystems are of two types, stress and disturbance. The effects of stress or disturbance on aquatic systems are discussed in relation to the following questions:Can we predict the state and rate of recolonization after a disturbance? What are the strategies of recolonization developed by plants? How high is the resilience of a disturbed system? Two theories, the intermediate disturbance hypothesis, and the patch dynamics concept proposed to predict the composition, structure and dynamics of plants due to physical-chemical factors, were tested on two scales, that of communities and that of species, within two alluvial floodplains (the Rhine and the Rhône systems in France).With regard to the change of community on a larger scale (i.e. the whole network of the cut-off channels in the floodplain), large gradients of connection and disturbance induce high diversities within communities. Moreover, the highest flood disturbance induces a higher species richness and the occurrence of a particular species. The change in species is analysed using biological traits (morphological, reproductive or physiological). In the floodplain of the river Rhône, the response of plants corresponds well to theory, i.e. that habitats with an intermediate disturbance are richer than more or less disturbed habitats. So we can predict, through the biological traits, the functioning of a habitat. The last remaining question is that of the resilience of the system, which can be discussed in terms of species competition and the risk of biological invasion after an opening of habitat.     

Restoration of plant–pollinator interaction networks via species translocation

The recent decline in pollinator biodiversity, notably in the case of wild bee populations, puts both wild and agricultural ecosystems at risk of ecological community collapse. This has triggered calls for further study of these mutualistic communities in order to more effectively inform restoration of disturbed plant–pollinator communities. Here, we use a dynamic network model to test a variety of translocation strategies for restoring a community after it experiences the loss of some of its species. We consider the reintroduction of extirpated species, both immediately after the original loss and after the community has reequilibrated, as well as the introduction of other native species that were originally absent from the community. We find that reintroducing multiple highly interacting generalist species best restores species richness for lightly disturbed communities. However, for communities that experience significant losses in biodiversity, introducing generalist species that are not originally present in the community may most effectively restore species richness, although in these cases the resultant community often shares few species with the original community. We also demonstrate that the translocation of a single species has a minimal impact on both species richness and the frequency of community collapse. These results have important implications for restoration practices in the face of varying degrees of community perturbations, the refinement of which is crucial for community management.     

青藏高原多年冻土区不同草地生态系统恢复能力评价

草地生态系统恢复能力是评价人类工程活动对青藏高原多年冻土生态系统影响的重要组分.分析了不同草地生态系统干扰带和非干扰带群落特征、植物多样性、草地初级生产力和经济类群,综合评价了青藏高原多年冻土区地上植被在受工程活动干扰后的综合恢复能力.结果表明:经过近20多年的自然恢复,青藏苔草草原、紫花针茅草原、扇穗茅草原、高山嵩草草甸、矮蒿草草甸和藏蒿草沼泽化草甸6种草地的盖度和物种组成均有一定程度的恢复,且草原群落的恢复程度好于草甸群落,但干扰群落仍低于未干扰群落;紫花针茅草原分布区物种多样性恢复好于其他草地类型分布区;干扰带由最初的地上植物生物量全部为0恢复到148.8～489.6 g·m^-2,其中藏嵩草沼泽化草甸干扰带恢复最好,生物量达489.6 g·m^-2;除藏嵩草恢复群落的饲用植物类群组成相对稳定外,干扰后的其他5种草地类型饲用价值降低.高寒草原生态系统的植被综合恢复能力显著高于草甸生态系统.     

Nutrient enrichment weakens the stabilizing effect of species richness

With global freshwater biodiversity declining at an even faster rate than in the most disturbed terrestrial ecosystems, understanding the effects of changing environmental conditions on relationships between biodiversity and the variability of community and population processes in aquatic ecosystems is of significant interest. Evidence is accumulating that biodiversity loss results in more variable communities; however, the mechanisms underlying this effect have been the subject of considerable debate. We manipulated species richness and nutrients in outdoor aquatic microcosms composed of naturally occurring assemblages of zooplankton and benthic invertebrates to determine how the relationship between species richness and variability might change under different nutrient conditions. Temporal variability of populations and communities decreased with increasing species richness in low nutrient microcosms. In contrast, we found no relationship between species richness and either population or community variability in nutrient enriched microcosms. Of the different mechanisms we investigated (e.g. overyielding, statistical averaging, insurance effects, and the stabilizing effect of species richness on populations) the only one that was consistent with our results was that increases in species richness led to more stable community abundances through the stabilizing effect of species richness on the component populations. While we cannot conclusively determine the mechanism(s) by which species richness stabilized populations, our results suggest that more complete resource-use in the more species-rich low nutrient communities may have dampened population fluctuations.     

Effect of disturbance and nutrient addition on native and introduced annuals in plant communities in the Western Australian wheatbelt

To investigate factors affecting the ability of introduced species to invade natural communities in the Western Australian wheatbelt, five communities were examined within a nature reserve near Kellerberrin. Transect studies indicated that introduced annuals were more abundant in woodland than in shrub communities, despite an input of introduced seed into all communities. The response of native and introduced annuals to soil disturbance and fertilizer addition was examined. Small areas were disturbed and/or provided with fertilizer prior to addition of seed of introduced annuals. In most communities, the introduced species used (Avena fatua and Ursinia anthemoides) established well only where the soil had been disturbed, but their growth was increased greatly when fertilizer was also added. Establishment and growth of other introduced species also increased where nutrient addition and soil disturbance were combined. Growth of several native annuals increased greatly with fertilizer addition, but showed little response to disturbance. Fertilizer addition also significantly increased the number of native species present in most communities. This indicates that growth of both native and introduced species is limited by nutrient availability in these communities, but also that introduced species respond more to a combination of nutrient addition and soil disturbance.     

Impact of nutrient enrichment and alkalinization on periphyton communities in the New Jersey Pine Barrens

The impact of residential and agricultural development on stream periphyton communities in the New Jersey Pine Barrens was examined by comparison with communities in undeveloped areas. Watershed disturbance resulted in stream water primarily characterized by greatly elevated pH levels and nitrate concentrations. A total of 53 periphyton species were encountered in bimonthly samples over a one year period in the three disturbed and three undisturbed study streams. Species richness was significantly greater in the disturbed streams based on three criteria: the average number of species per stream on each sampling occasion (disturbed = 6.3; undisturbed = 4.9), the average number of species per stream for the entire year (disturbed = 19.3; undisturbed = 16.0), and the total number of species found in streams within a type (disturbed = 40; undisturbed = 31). Species composition also changed significantly as the result of disturbance. There appeared to be replacement of species characteristic of undisturbed Pine Barrens streams with species peripheral to the region. The expected effects of both elevated pH and nitrate were consistent with these results.     

Population structure and physiological changes within a hot spring microbial mat community following disturbance.

The influence of disturbance on a hot spring cyanobacterial mat community was investigated by physically removing the top 3.0 mm, which included the entire cyanobacterial layer. Changes in 16S rRNA-defined populations were monitored by denaturing gradient gel electrophoresis analysis of PCR-amplified 16S rRNA gene segments. Some previously absent cyanobacterial populations colonized the disturbed areas, while some populations which were present before the disturbance remained absent for up to 40 days. Changes in physiological activity were measured by oxygen microelectrode analyses and by 14CO2 incorporation into cyanobacterial molecular components. These investigations indicated substantial differences between the disturbed and undisturbed mats, including an unexplained light-induced oxygen consumption in the freshly exposed mat, increased carbon partitioning by phototrophs into growth-related macromolecules, bimodal vertical photosynthesis profiles, and delayed recovery of respiration relative to photosynthesis.     

Microfungal Community Changes in Rodent Food Stores over Space and Time

Abstract This paper reports the changes over time in the microfungal communities that inhabit three rodent species' food stores at two climatically different locations. Results reveal that microfungal diversity values calculated from above-ground food stores are highest in the more commonly disturbed portions of the rodent dens. Interactions among food-inhabiting microbes and between the rodents and food-inhabiting microbes also appear to influence the microfungal communities within the rodent dens. For example, our data suggest that transport by animal vectors, and not by air currents, is more effective at dispersing microbial propagules. Furthermore, although fungal communities inhabiting food stores within dens varied in composition and diversity over time, standardized substrates (sorghum seeds) simultaneously placed within the food stores converged in microfungal composition the longer they were left within the dens. We hypothesize that animal vectors, including rodents, make neighboring fungal communities more alike by introducing similar communities of microbes, which in turn initiate a cascade of biological interactions that, over time, result in similar microfungal communities inhabiting newly stored food items. Received: 14 January 1999; Accepted: 2 April 1999     

Community-Level Physiological Profiles of Cloacal Microbes in Songbirds (Order: Passeriformes): Variation Due to Host Species, Host Diet, and Habitat

The relationship between microorganisms and birds has received increased attention recently. The state of knowledge of this relationship, however, is based largely on examination of sick or dead birds, and knowledge of the prevalence and community structure and function of microbes in healthy wild populations is limited. Using carbon substrate utilization profiles, microbial communities were examined in 91 cloacal samples from 14 species within apparently healthy summer and winter passerine populations. Within each season, gradient lengths and eigenvalues from ordination analyses suggested that many samples differed in their carbon substrate utilization and several had very different communities. Cloacal microbe carbon utilization profiles were distinguishable among host species, season-specific diet, and study site in the ordination analyses. However, these patterns were only observed for the analysis of the summer data set. The results of this study support the idea that the avian host’s microbial community, relative to carbon substrate utilization, is related to host diet. Previously, this pattern had only been reported for potential pathogens isolated from the avian cloaca. Study site–specific patterns in the ordination analysis suggest that environmental conditions at a particular study site may influence cloacal microbial communities in birds. Results of this study indicate that examination of community-level physiological profiles may be a useful technique for distinguishing among avian cloacal samples, similar to that already established for discriminating aqueous and soil samples. Future studies that correlate microbe physiological profiles to condition-based indices of avian hosts may be most useful for eventually using the profile as an indicator of environmental conditions experienced by hosts.     

Experimental disturbance and the maintenance of species diversity in a stream community

Summary In order to test the role of disturbance and the effects of disturbance frequency on stream communities, an experiment was conducted in New Hope Creek, North Carolina, USA. Patches of cobbles were tumbled 0, 1 or 2 times in a 6 week span. These tumbling disturbances lasted only 30 seconds. The recovery of the macroinvertebrates was monitored.Most taxa showed major reductions in population density immediately following the disturbance. The percent reduction of a given taxon in disturbed vs. control patches ranged from 21.4–95%. Recovery to near normal population levels was achieved in about four weeks. A second disturbance caused similar population reductions as the first one, and delayed the recovery.The macroinvertebrate community in cobbles was demonstrated to be resilient in that populations quickly regained their predisturbance densities. Rare taxa did not selectively colonize disturbed patches. The implications of these findings for the intermediate disturbance hypothesis and the structure of stream communities is discussed. Disturbance is a major determinant of lotic community structure and species diversity.     

Anthropogenic disturbance changes the structure of arboreal tropical ant communities

We investigated the influence of anthropogenic disturbance on the structure of arboreal Formicidae communities in SE Asian lowland forests. Included were a primary forest and three disturbed forests which had been cut for crop planting and abandoned 5. 15, and 40 yr after agricultural use for natural regeneration. Ant communities of at least 10 individuals of one tree species were sampled from each forest type by fogging. Diversity and community structure differed clearly among forest types. During the course of forest regeneration ant communities became more and more similar to those of the primary forest. A surrogate analysis shows that ant communities of the primary forest cannot be distinguished from randomly composed communities. This is in contrast to the theoretical expectations according to which ant communities should be structured by interspecific competition that lead to a large degree of predictability. However, a deterministic pattern of ant communities is found in the disturbed forest. This indicates that human disturbance not only changes the faunistic composition of ant communities but could also change the dynamics of the whole system. The transition from stochastic to deterministic communities might be of general importance for understanding the mechanisms structuring communities in disturbed habitats.     

Bacterial species may exist, metagenomics reveal

Whether or not bacterial species exist remains an unresolved issue of paramount theoretical as well as practical consequences. Here we review and synthesize the findings emerging from metagenomic surveys of natural microbial populations and argue that microbial communities are predominantly organized in genetically and ecologically discernible populations, which possess the attributes expected for species. These sequence-discrete populations represent a major foundation for beginning high-resolution investigations on how populations are organized, interact, and evolve within communities. We also attempt to reconcile these findings with those of previous studies that reported indiscrete species and a genetic continuum within bacterial taxa and discuss the implications for the current bacterial species definition.     

Competition limits adaptation and productivity in a photosynthetic alga at elevated CO2

When competitive exclusion between lineages and genetic adaptation within lineages occur on the same timescale, the two processes have the potential to interact. I use experimental microbial evolution where strains of a photosynthetic microbe that differ in their physiological response to CO₂ enrichment are grown either alone or in communities for hundreds of generations under CO₂ enrichment. After about 300 generations of growth, strains that experienced competition while adapting to environmental change are both less productive and less fit than corresponding strains that adapted to that same environmental change in the absence of competitors. In addition, I find that excluding competitors not only limits that strain''s adaptive response to abiotic change, but also decreases community productivity; I quantify this effect using the Price equation. Finally, these data allow me to empirically test the common hypothesis that phytoplankton that are most able to take advantage of carbon enrichment in single-strain populations over the short term will increase in frequency within multi-strain communities over longer timescales.