Effects of nutrient enrichment and leaf quality on the breakdown of leaves in a hardwater stream

1. The breakdown of leaf litter in streams is influenced strongly by leaf quality and the concentration of dissolved nutrients, primarily inorganic nitrogen (N) and phosphorus (P) in the water. We examined the effect of nutrient enrichment on the breakdown of three species of leaves in a hardwater, nutrient‐rich stream. The rate of microbial respiration was also measured on the decomposing leaves. 2. The breakdown rates of dogwood (Cornus stolonifera), aspen (Populus tremuloides) and birch (Betula occidentalis), k‐values of 0.0461, 0.0307 and 0.0186 day^–1, respectively, were unaffected by nutrient enrichment and generally faster than reported previously. Microbial respiration on the leaves was greater than reported previously for leaves of congeneric species. It appears that leaf breakdown in the study stream was not nutrient limited. 3. Nitrogen‐based measures of leaf quality, such as percentage N and carbon (C)/nitrogen ratio, did not correspond to measured breakdown rates among the three leaf types. The best predictors of relative breakdown rates were percentage lignin and the percentage of the total carbon that occurred as lignin. We suggest that, when leaf breakdown is not nutrient limited, measures of carbon quality (i.e. lignin‐based measures) are a better assessment of overall leaf quality than are N‐based measures. 4. Previous studies have indicated that the enzymes produced by aquatic hyphomycetes (microfungi) operate most efficiently at a basic pH and in the presence of calcium ions. The hardwater conditions (pH=8.6, total hardness > 300 mg CaCO₃ L^–1) and abundance of dissolved NO₃ and soluble reactive phosphorous (SRP) (approximately 50 μg L^–1, each) in the study stream appear to have provided conditions that resulted in a high respiration rate and rapid breakdown of leaf litter.     

Model to assess muscle protein turnover: domain of validity using amino acyl-tRNA vs. surrogate measures of precursor pool

Current models to measure protein turnover across muscle bed are based on many surrogate measures of amino acyl-tRNA. We measured muscle protein turnover based on tracer-to-tracee ratios of the stable isotopes of leucine, phenylalanine, and ketoisocaproate (KIC) in artery and vein and muscle amino acyl-tRNA and muscle tissue fluid (TF) in 26 healthy subjects. A three-compartment model calculation based on arteriovenous and tRNA measurements was first performed and its domain of validity assessed. The results were then compared with those using simpler approaches based on surrogate measures of tRNA such as those of TF and KIC and a one-compartment model based on arteriovenous amino acids. In 96% of cases, the model using tRNA was applicable, but only in a lower percentage of cases were the results using surrogate measures applicable. Protein breakdown, protein synthesis, and shunting of amino acids from artery to vein were consistently underestimated, and fluxes of amino acid from artery to intracellular compartment and from intracellular compartment to vein were overestimated, when surrogate measures were used. The one-compartment model also underestimated protein breakdown and synthesis. Measurements using tissue fluid gave results closer to those based on tRNA. In conclusion, a three-compartment model using arteriovenous samples and amino acyl-tRNA provides measurements of muscle protein turnover of acceptable precision in 96% of cases. The precision was unacceptable in a substantial percentage of cases, and the accuracy of the estimation of protein fluxes was significantly affected when surrogate measures were used.     

Osmotic hemolysis and fragility A new model based on membrane disruption,and a potential clinical test

Red cell osmotic hemolysis has traditionally been defined by the loss of hemoglobin, in response to reduced osmotic pressure, as measured spectroscopically. Previous work from this laboratory using resistive pulse spectroscopy (RPS) has shown that in a mixed population of hemolyzing cell, ghosts can be detected as being more deformable, and hence appearing distinctly smaller, than the remaining intact cells. Other researchers using similar methods have reported detection of ghosts as apparently smaller objects, resulting from their greater sensitivity to dielectric breakdown. We now confirm both of these results, and demonstrate by kinetic studies that changes which occur in the rheological and electrical properties of ghosts are independent phenomena. We include in our analysis the explicit calculation of ghost and intact spherocyte resistivity after dielectric breakdown. The two different characterizations for ghosts are integrated into a proposed model of osmotic hemolysis based on known red blood cell membrane and cytoplasmic properties. This work provides both a theoretical and a practical foundation for RPS-based measures of osmotic fragility, including a potential new clinical test, measures which provide very early detection of the ultimate fate of osmotically stressed red cells.     

Effect of dietary level of protein on the metabolism of mouse liver nuclear proteins.

The effect of protein depletion and refeeding on the metabolism of mouse liver nuclear proteins was studied. Five days protein depletion caused a 35% decrease in total nuclear protein. A fast recovery of the lost proteins, except histones, was induced when depleted mice were refed with a normal diet. Depletion caused a decrease in total nuclear protein synthesis, whereas refeeding quickly restored its normal value. The rates of total nuclear protein breakdown were estimated either as the difference between synthesis and protein gain or from the decay of radioactivity in protein labeled by the administration of both sodium [14C]bicarbonate and [35S]methionine. By these procedures, it was found that refeeding caused a slowdown in total nuclear protein breakdown. Hence, the recovery of the protein content observed during refeeding is due to both a restoration of synthesis and a decrease of breakdown. The [14C]bicarbonate procedure did not permit to obtain a high efficiency of label and, therefore, it was unsatisfactory for the measurement of the breakdown of fractionated nuclear proteins. A labeling procedure using [35S]methionine was designed for adequate measures of the decay of radioactivity in these proteins. This allows us to find that a slow down in breakdown affects similarly during refeeding to histones, to non histones, and to a fraction which contains ribonucleoproteins and soluble proteins.     

Is the coral‐algae symbiosis really ‘mutually beneficial’ for the partners?

The consideration of ‘mutual benefits’ and partner cooperation have long been the accepted standpoint from which to draw inference about the onset, maintenance and breakdown of the coral‐algae endosymbiosis. In this paper, I review recent research into the climate‐induced breakdown of this important symbiosis (namely ‘coral bleaching’) that challenges the validity of this long‐standing belief. Indeed, I introduce a more parsimonious explanation, in which the coral host exerts a ‘controlled parasitism’ over its algal symbionts that is akin to an enforced domestication arrangement. Far from being pathogenic, a range of well‐established cellular processes are reviewed that support the role of the coral host as an active ‘farmer’ of the energy‐rich photoassimilates from its captive symbionts. Importantly, this new paradigm reposes the deleterious bleaching response in terms of an envelope of environmental conditions in which the exploitative and captive measures of the coral host are severely restricted. The ramification of this new paradigm for developing management strategies that may assist the evolution of bleaching resistance in corals is discussed.     

Hormonal regulation of phosphatidylinositol breakdown

Cyclic AMP and Ca2+ are intracellular mediators of hormone action. Catecholamines interact with beta adrenoceptors to activate adenylate cyclase or with alpha 2 adrenoceptors to inhibit adenylate cyclase. Alpha 1 adrenoceptor activation results in elevation of cytosol Ca2+ and an increased breakdown of phosphatidylinositol. In blowfly salivary glands, 5-hydroxytryptamine (5-HT) interacts with beta type receptors resulting in adenylate cyclase activation while alpha type receptors are involved in phosphatidylinositol breakdown and elevation of cytosol Ca2+. The link between Ca2+ mobilization and phosphatidylinositol breakdown remains to be established but breakdown of the receptor-regulated pool of phosphatidylinositol is not secondary to the rise in Ca2+. Direct addition of 5-HT to cell-free homogenates of blowfly salivary glands results in activation of phosphatidylinositol breakdown in the absence of Ca2+. In rat liver plasma membrane preparations, vasopressin increases phosphatidylinositol breakdown in the absence of Ca2+ or cytosol if deoxycholate is present. The data do not indicate whether hormone activation increases the availability of substrate to enzymatic hydrolysis or activates phospholipase C. However, they demonstrate that hormones directly accelerate phosphatidylinositol breakdown.     

MPF-induced breakdown of cytokeratin filament organization in the maturing Xenopus oocyte depends upon the translation of maternal mRNAs

In Xenopus, one of the most dramatic events during oocyte maturation is the breakdown of the oocyte's asymmetrically organized system of cytokeratin-type intermediate filaments. Following oocyte maturation in vitro, we found that (1) the breakdown of cytokeratin filament organization proceeds in an animal to vegetal direction, (2) cytokeratin filament breakdown occurs normally in enucleated oocytes and so is independent of nuclear components, and (3) the injection of maturation-promoting factor (MPF) induces the breakdown of cytokeratin filaments. While the MPF-induced breakdown of the nuclear envelope is independent of new protein synthesis, the MPF-induced breakdown of cytokeratin filament organization requires the translation of maternal mRNAs. These results strongly suggest that the factors regulating cytokeratin reorganization in the oocyte are distinct from those involved in the breakdown of the nuclear envelope.     

Mechanism and Significance of Chlorophyll Breakdown

Chlorophyll breakdown is the most obvious sign of leaf senescence and fruit ripening. A multistep pathway has been elucidated in recent years that can be divided into two major parts. In the first phase, which commonly is active in higher plants, chlorophyll is converted via several photoreactive intermediates to a primary colorless breakdown product within the chloroplast. The second part of chlorophyll breakdown takes place in the cytosol and the vacuole. During this phase, the primary colorless intermediate is modified in largely species-specific reactions to a number of similar, yet structurally different, linear tetrapyrrolic products that finally are stored within the vacuole of senescing cells. To date, most of the biochemical reactions of the first phase of chlorophyll breakdown have been elucidated and genes have been identified. By contrast, mechanisms of catabolite transport and modification during the second phase are largely unknown. This review summarizes the current knowledge on the biochemical reactions involved in chlorophyll breakdown, with a special focus on the second-phase reactions and the fate of by-products that are released from chlorophyll during its breakdown.     

A fluid dynamics approach to bioreactor design for cell and tissue culture

The problem of controlling cylindrical tank bioreactor conditions for cell and tissue culture purposes has been considered from a flow dynamics perspective. Simple laminar flows in the vortex breakdown region are proposed as being a suitable alternative to turbulent spinner flask flows and horizontally oriented rotational flows. Vortex breakdown flows have been measured using three-dimensional Stereoscopic particle image velocimetry, and non-dimensionalized velocity and stress distributions are presented. Regions of locally high principal stress occur in the vicinity of the impeller and the lower sidewall. Topological changes in the vortex breakdown region caused by an increase in Reynolds number are reflected in a redistribution of the peak stress regions. The inclusion of submerged scaffold models adds complexity to the flow, although vortex breakdown may still occur. Relatively large stresses occur along the edge of disks jutting into the boundary of the vortex breakdown region.     

Dominant species can produce a negative relationship between species diversity and ecosystem function

Several studies have reported a positive relationship between species richness and ecosystem functioning. However, if much of a particular ecosystem function is performed by one species (i.e. a functionally dominant species) and this species is also a competitive dominant that excludes other taxa from a habitat, then it is possible to obtain a negative relationship between richness and ecosystem functioning. Results of a leaf pack breakdown experiment in a small stream suggested that the caddisfly Pycnopsyche gentilis , a common detritivorous insect in North American headwater streams, was both a functional and competitive dominant. In a second experiment we compared the effect of Pycnopsyche on leaf breakdown to that of other detritivore taxa by enclosing them with leaf packs in a section of headwater stream in which they were uncommon ( Pycnopsyche transplant experiment). Final leaf pack mass was significantly lower in the Pycnopsyche enclosure treatment; leaves exposed to a greater diversity of detritivores displayed little reduction in leaf mass. These results demonstrated that Pycnopsyche was a functionally dominant detritivore. In a third experiment ( Pycnopsyche density experiment) we found that Pycnopsyche was also a competitively dominant species. Leaf packs and large Pycnopsyche were placed in enclosures that were permeable to the majority of other detritivores but not Pycnopsyche . Leaf mass lost increased with increasing Pycnopsyche density. Leaf packs exposed to Pycnopsyche , however, contained fewer detritivore taxa which suggested that Pycnopsyche was also a competitive dominant. There was a negative relationship between three measures of diversity and leaf litter breakdown in the Pycnopsyche density experiment. Experiments conducted in natural communities that incorporate important species interactions may produce diversity-ecosystem function relationships other than the positive ones that are commonly reported.     

Mechanisms linking plant community properties to soil aggregate stability in an experimental grassland plant diversity gradient

Background and aims

Soil aggregate stability depends on plant community properties, such as functional group composition, diversity and biomass production. However, little is known about the relative importance of these drivers and the role of soil organisms in mediating plant community effects.

Methods

We studied soil aggregate stability in an experimental grassland plant diversity gradient and considered several explanatory variables to mechanistically explain effects of plant diversity and plant functional group composition. Three soil aggregate stability measures (slaking, mechanical breakdown and microcracking) were considered in path analyses.

Results

Soil aggregate stability increased significantly from monocultures to plant species mixtures and in the presence of grasses, while it decreased in the presence of legumes, though effects differed somewhat between soil aggregate stability measures. Using path analysis plant community effects could be explained by variations in root biomass, soil microbial biomass, soil organic carbon concentrations (all positive relationships), and earthworm biomass (negative relationship with mechanical breakdown).

Conclusions

The present study identified important drivers of plant community effects on soil aggregate stability. The effects of root biomass, soil microbial biomass, and soil organic carbon concentrations were largely consistent across plant diversity levels suggesting that the mechanisms identified are of general relevance.     

Organic matter breakdown as a measure of stream health in New Zealand streams affected by acid mine drainage

Functional indicators of stream health have the potential to provide insights into stream condition that cannot be gained by traditional structural indices. We examined breakdown of leaves, wood, and cotton cloth strips at 18 sites along a gradient of effects of drainage from coal mines in New Zealand to determine the usefulness of these methods as functional indicators of stream health. The pH varied from 2.7 to neutral across the streams, and the more acidic streams typically had higher concentrations of aluminum, iron, zinc, and other metal ions. Precipitates of metal (mainly iron) hydroxides were present in most streams affected by mine drainage, especially in those with a pH of 4–5. Breakdown rates of all organic matter types were highest in several reference streams with neutral pH and lowest in sites with high rates of metal hydroxide deposition. Breakdown was relatively fast in the most acidic streams (pH < 3), in some cases as fast as at reference sites; these sites also had elevated nutrient concentrations. Shredding invertebrates were absent in litterbags from acidic streams and common at only 2 reference sites; their presence contributed to fast breakdown of leaves in the field and in lab microcosms. Microbial respiration was closely related to breakdown rates of leaves and wood; it was high at neutral and highly acidic streams, but lower at sites with pH 4–5, where metal hydroxides were precipitating onto solid surfaces. In these metal hydroxide-stressed streams, leaf and wood breakdown was slower, and associated biota, including microbes, were more affected than by water chemistry stressors (pH, dissolved metals) associated with mine drainage. Litter breakdown and microbial respiration provide insight into the functioning of streams, yielding different responses than traditional structural measures based on macroinvertebrates, which did not accurately distinguish impacts from acid mine drainage.     

Mechanism of insulin's anabolic effect on muscle: measurements of muscle protein synthesis and breakdown using aminoacyl-tRNA and other surrogate measures

Despite being an anabolic hormone in skeletal muscle, insulin's anticatabolic mechanism in humans remains controversial, with contradictory reports showing either stimulation of protein synthesis (PS) or inhibition of protein breakdown (PB) by insulin. Earlier measurements of muscle PS and PB in humans have relied on different surrogate measures of aminoacyl-tRNA and intracellular pools. We report that insulin's effect on muscle protein turnover using aminoacyl-tRNA as the precursor of PS and PB is calculated by mass balance of tracee amino acid (AA). We compared the results calculated from various surrogate measures. To determine the physiological role of insulin on muscle protein metabolism, we infused tracers of leucine and phenylalanine into 18 healthy subjects, and after 3 h, 10 subjects received a 4-h femoral arterial infusion of insulin (0.125 mUxkg(-1)xmin(-1)), while eight subjects continued with saline. Tracer-to-tracee ratios of leucine, phenylalanine, and ketoisocaproate were measured in the arterial and venous plasma, muscle tissue fluid, and AA-tRNA to calculate muscle PB and PS. Insulin infusion, unlike saline, significantly reduced the efflux of leucine and phenylalanine from muscle bed, based on various surrogate measures which agreed with those based on leucyl-tRNA (-28%), indicating a reduction in muscle PB (P < 0.02) without any significant effect on muscle PS. In conclusion, using AA-tRNA as the precursor pool, it is demonstrated that, in healthy humans in the postabsorptive state, insulin does not stimulate muscle protein synthesis and confirmed that insulin achieves muscle protein anabolism by inhibition of muscle protein breakdown.     

Inhibition of protein breakdown by epidermal growth factor in IMR90 human fibroblasts and other mammalian cell lines.

1. Epidermal growth factor (EGF) inhibits intracellular protein breakdown in IMR90 human fibroblasts and other cell lines having EGF receptors. 2. Inhibition is achieved within 1 h of exposure to the growth factor and is reversed equally rapidly upon removal of EGF. 3. EGF inhibits protein breakdown and stimulates protein and DNA labelling with similar dependency on concentration. Half-maximal effects for all processes with IMR90 and AG2804 cell lines occur at 0.2 nM- and 0.05 nM-EGF respectively. 4. EGF and insulin effects on protein breakdown are additive only when the factors are included at suboptimal concentrations. 5. The apparent Kd for EGF binding in several cell lines is approximately 10-fold higher than the concentration needed for half-maximal inhibition of protein breakdown. 6. Down-regulation of EGF receptors in IMR90 cells produced a 60% decrease in the binding of 125I-labelled EGF. This was accompanied by a displacement of the concentration curve for EGF inhibition of protein breakdown by approximately two orders of magnitude, suggesting that protein breakdown can no longer respond to the down-regulated receptor-growth-factor complex. 7. Phorbol esters decrease the inhibitory effect of EGF, but not of insulin, on protein breakdown in IMR90 cells.     

Quality factor of a plasma waveguide and contraction of laser-induced breakdown waves in gases

A previously developed plasma-waveguide model of a long laser spark in atmospheric-pressure gases is used to describe the evolution of a plasma waveguide produced in the course of electric breakdown and to analyze energy dissipation in it. The requirements are formulated for the plasma density profile to be steep enough in order that the threshold conditions for electric breakdown can be satisfied, and the conditions are determined under which the distortion of the plasma density profile can lead to a decrease in the diameter of the breakdown wave.     

Effects of a predatory fish on a tropical detritus-based food web

In contrast to that for grazing systems, relatively little information exists for trophic cascades in detritus-based stream food webs, which are predominant in forested headwater streams. Predator–prey interactions are thought to be weak in these systems, but studies are very scarce, their results are equivocal, and they do not separate the effect of direct consumption from a behavioural response of shredders. We examined the effect of predatory fish on leaf litter breakdown in headwater tropical Australian streams at three levels: (1) the behavioural response of shredder species to predator presence as indicated by chemical cues; (2) the rates of leaf breakdown resulting from shredder activity; and (3) the relationship between shredder species richness and leaf breakdown rates. Our results suggest that predatory fish can have a trait-mediated effect on detritus-based food webs in streams, by reducing consumer activity. We identified reductions in short-term overall activity in response to the presence of predatory fish cues, comparable to those found for grazers. We also observed a visible, albeit statistically non-significant, reduction in consumption rates. Shredder species richness did not affect leaf breakdown rates, and fish presence did not modify this relationship or the differences in breakdown rates among species, suggesting that the overall reduction in leaf breakdown caused by fish presence is due to a reduction in activity in every species. Thus, our laboratory studies have shown that there can be a behavioural basis for trait-mediated trophic cascades linked to fish presence in detrital food webs in streams. However, the strength of fish effects depends on environmental circumstances, and field studies of litter breakdown in streams with and without predatory fish are required if we are to elucidate the ecological significance of our observations.     

Chlorophyll breakdown and chlorophyll catabolites in leaves and fruit

Chlorophyll metabolism probably is the most visible manifestation of life. Total annual turnover of chlorophyll has been estimated to involve more than 1000 million tons. Surprisingly, chlorophyll catabolism has remained an enigma until less than twenty years ago, when a colorless chlorophyll catabolite from senescent plant leaves was identified and its structure was elucidated. In the meantime, chlorophyll breakdown products have been identified in a variety of plant leaves and their structural features have been elucidated. Most recently, chlorophyll breakdown products have also been identified in some ripening fruit. Chlorophyll breakdown in vascular plants only fleetingly involves enzyme-bound colored intermediates. The stage of fluorescent catabolites is also passed rapidly, as these isomerize further to colorless nonfluorescent tetrapyrrolic catabolites. The latter accumulate in the vacuoles of de-greened leaves and are considered the final products of controlled chlorophyll breakdown. The same tetrapyrroles are also found in ripening fruit and are effective antioxidants. Chlorophyll breakdown leads to tetrapyrroles that appear to have physiologically beneficial chemical properties, and it may thus not merely be a detoxification process.     

Neutrophil depletion retards endometrial repair in a mouse model

The contribution of the high abundance of inflammatory cells present in the human endometrium prior to and during menstruation is unknown with respect to endometrial repair and/or menstruation. In this study, the presence and localisation of markers for key inflammatory cells have been examined in a mouse model of endometrial breakdown and repair and the functional contribution of neutrophils has been determined. In the model, decidualisation is artificially induced and progesterone support withdrawn; the endometrial tissue progressively breaks down by 24 h after progesterone withdrawal and, by 48 h, has usually undergone complete repair. Neutrophils have been identified in low abundance in decidual tissue, rise in number during breakdown and are most abundant during early repair. Macrophages are barely detectable during breakdown or repair in this model, whereas uterine natural killer cells are found only in intact decidua. The functional contribution of neutrophils to endometrial breakdown and repair has been assessed via neutrophil depletion by using the antibody RB6-8C5. This antibody significantly depletes neutrophils from the circulation and tissue, affects endometrial breakdown and markedly delays endometrial repair. This study has therefore demonstrated that neutrophils are the most abundant leucocyte in this model and that they play an important functional role in the processes of endometrial breakdown and repair. This work was funded by the National Health and Medical Research Council of Australia (#143798, #241000) and by an Australian Postgraduate Scholarship to T.K.     

Effects of shredding amphipod density on watercress Nasturtium officinale breakdown

Shredding stream invertebrates should have a positive influence on the breakdown rates of leaf litter via direct consumption and particle fragmentation. To determine the effects of shredder density on litter breakdown, breakdown of the emergent stream macrophyte, Nasturtium officinale , was investigated using three litter bag mesh sizes [fine (0.2 mm), medium (1 mm) and coarse (3 mm) mesh] and four stocking densities of the shredder, Gammarus pseudolimnaeus , (0, 4, 8 and 16 per bag). Watercress decayed very rapidly, with breakdown rates ( k values) ranging from 0.075 d^-1 for fine mesh with no shredders to 0.24 d^-1 for coarse mesh. Stocked Gammarus increased breakdown rates significantly in fine mesh bags (p < 0.001), but only marginally in medium mesh bags (p < 0.1). Breakdown rates also increased significantly with mesh size. A regression model showed a significant relation of breakdown rate to Gammarus density and mesh size. These results clearly show that shredders can significantly influence breakdown rates and can account for up to 30% of breakdown, but that mesh size effects such as particle size reduction and loss are also very important.     

Peculiarities of formation and development of initial stages of an impulse breakdown in argon

The experimental results on the formation and development of initial stages of an impulse breakdown in atmospheric-pressure argon at townsend and streamer breakdown mechanisms for different initial conditions are presented. A streamer channel is shown to be initiated by bright luminescence formed at the point of critical avalanche amplification at different distances from the cathode depending on overvoltage. Prebreakdown currents are experimentally measured for the townsend and streamer breakdown mechanisms and peculiarities of spark channel formation for these mechanisms are studied.