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1.
Hydrolysis of benzyloxycarbonyl-GlyGlyPhe by nitro(Tyr 248)carboxypeptidase A over the pH range 4.88–8.04 has been examined. The nitroenzyme retains appreciable activity near pH 6.5, and the limiting value of Km is scarcely affected. The peptidase activity has a pH dependence characterized by the following parameters: pKE1 of 6.37 ± 0.19 and pKE2 of 6.60 ± 0.17 in kcatKm, and apparent pK of 5.59 ± 0.06 in Kcat. A spectroscopic pK of 6.75 ± 0.01, attributable to the nitro-Tyr 248 residue, has been determined. This correlates with the base-limb pKE2 in the kcatKm profile, which appears to be shifted from a higher value, pKE2 of 9.0, for the native enzyme. The single (acid-limb) pK which characterizes the kcat profile of the native enzyme is also found to be perturbed to a lesser extent by nitration. A kinetically competent reverse protonation mechanism, based on chemical modification and crystallographic evidence for the enzyme, is described.  相似文献   

2.
Luit Slooten  Adriaan Nuyten 《BBA》1984,766(1):88-97
(1) Rates of ATP synthesis and ADP-arsenate synthesis catalyzed by Rhodospirillum rubrum chromatophores were determined with the firefly luciferase method and by a coupled enzyme assay involving hexokinase and glucose-6-phosphate dehydrogenase. (2) Vm for ADP-arsenate synthesis was about 2-times lower than Vm for ATP-synthesis. With saturating [ADP], K(Asi) was about 20% higher than K(Pi). With saturating [anion], K(ADP) was during arsenylation about 20% lower than during phosphorylation. (3) Plots of 1v vs. 1[substrate] were non-linear at low concentrations of the fixed substrate. The non-linearity was such as to suggest a positive cooperativity between sites binding the variable substrate, resulting in an increased VmKm ratio. High concentrations of the fixed substrate cause a similar increase in VmKm, but abolish the cooperativity of the sites binding the variable substrate. (4) Low concentrations of inorganic arsenate (Asi) stimulate ATP synthesis supported by low concentrations of Pi and ADP about 2-fold. (5) At high ADP concentrations, the apparent Ki of Asi for inhibition of ATP-synthesis was 2–3-times higher than the apparent Km of Asi for arsenylation; the apparent Ki of Pi for inhibition of ADP-arsenate synthesis was about 40% lower than the apparent Km of Pi for ATP synthesis. (6) The results are discussed in terms of a model in which Pi and Asi compete for binding to a catalytic as well as an allosteric site. The interaction between these sites is modulated by the ADP concentration. At high ADP concentrations, interaction between these sites occurs only when they are occupied with different species of anion.  相似文献   

3.
Initial velocity measurements were made on the ribonuclease A catalyzed hydrolysis of P-5′-Urd-2′:3′-P in the pH range 4.0–8.0 at 25 °C in 0.1 m Tris-acetate/0.1 m KCl. The pH dependence of the Michaelis constant, Km, the turnover number ks, and ksKm for P-5′-Urd-2′:3′-P were similar to those reported for Urd-2′:3′-P (5). When P-5′-Urd-2,3-P and Urd-2′:3′-P were compared under similar conditions the average difference in ks and Km indicated that these parameters were 5-fold and 23-fold lower, respectively, for P-5′-Urd-2′:3′-P. The slight difference in the pH dependence of ksKm for these two substrates can be interpreted in terms of a specific interaction of the enzyme at the 5′ position of P-5′-Urd-2′:3′-P, which permits a less exclusive dependence on the ionized state of the free enzyme in binding this substrate. The nature of the interaction of the substrate 5′-phosphomonoester group with the enzyme is discussed in terms of possible interactions with Lys-41 and His-119.  相似文献   

4.
5.
Lussier P. E., Podesta R. B. and Mettrick D. F. 1982. Hymenolepis diminuta: the non-saturable component of methionine uptake. International Journal for Parasitoiogy12: 265–270. The concentration dependence of in vitro unidirectional methionine influx by Hymenolepis diminuta was analysed by the relation: J = (JmCb)(Kt + Cb) + Kd(Cb), where Jm is the maximum uptake rate, Kt is the the apparent affinity constant and Cb is the medium substrate concentration. The linear component was separated using an asymptotic least squares curve fitting procedure and the resulting constant, Kd, is thought to be an apparent permeability coefficient. Kd may be a reflection of a simple diffusive component, a second mediated component or a combination of a passive and mediated influx. The low Q10 value of the Kd's for methionine uptake (Q10 = 1.31) indicated that this component is probably a reflection of diffusion within the membrane. However, the decrease in the Kd component in the presence of leucine and glycine, implies that there is also a small, second, mediated component in addition to the diffusive component. Kd derived from the asymptotic portion of the concentration-flux relation was compared with the residual flux of methionine after near complete inhibition of the mediated component with leucine and glycine. The Kd component was found to be pH-sensitive, increasing as the pH decreased and was not affected by external sodium. Results indicate that the mediated component of methionine influx was accelerated by increasing external Na+ and H+ concentrations.  相似文献   

6.
Quercetin inhibited a dog kidney (Na+ + K+)-ATPase preparation without affecting Km for ATP or K0.5 for cation activators, attributable to the slowly-reversible nature of its inhibition. Dimethyl sulfoxide, a selector of E2 enzyme conformations, blocked this inhibition, while the K+-phosphatase activity was at least as sensitive to quercetin as the (Na+ + K+)-ATPase activity, all consistent with quercetin favoring E1 conformations of the enzyme. Oligomycin, a rapidly-reversible inhibitor, decreased the Km for ATP and the K0.5 for cation activators, and its inhibition was also diminished by dimethyl sulfoxide. Although oligomycin did not inhibit the K+-phosphatase activity under standard assay conditions, a reaction presumably catalyzed by E2 conformations, its effects are nevertheless accommodated by a quantitative model for that reaction depicting oligomycin as favoring E1 conformations. The model also accounts quantitatively for effects of both dimethyl sulfoxide and oligomycin on Vmax, Km for substrate, and K0.5 for K+, as well as for stimulation of phosphatase activity by both these reagents at low K+ but high Na+ concentrations.  相似文献   

7.
Using guanidinium and n-butylammonium cations (C+) as models for the positively charged side chains in arginine and lysine, we have determined the association constants with various oxyanions by potentiometric titration. For a dibasic acid, H2A, three association complexes may exist: K1M = [CHA][C+] [HA?]; K1D = [CA?][C+] [A2?]; K2D = [C2A][C+] [CA?]. For guanidinium ion and phosphate, K1M = 1.4, K1D = 2.6, and K2D = 5.1. The data for carboxylates indicate that the basicity of the oxyanion does not affect the association constant: acetate, pKa = 4.8, K1M = 0.37; formate, pKa = 3.8, K1M = 0.32; and chloroacetate, pKa = 2.9, K1M = 0.43, all with guanidinium ion. Association constants are also reported for carbonate, dimethylphosphinate, benzylphosphonate, and adenylate anions.  相似文献   

8.
The kinetic parameters for the hydrolyses of different l-α-amino acid-β-naphthylamides by Bacillus subtilis aminopeptidase have been measured for the native enzyme and for the enzyme activated in 5 mm Co(NO3)2. In most cases Co2+ activation decreased Km(app) values and increased kcat values, in other cases km(app) and kcat values were increased; for the remainder of the substrates tested km(app) values and kcat values were decreased. In all cases tested the ratios of (kcatKm(app))CO2+/(kcatKm(app)nativ) were increased (2- to 108-fold). For the native enzyme the order of specificity toward the l-amino acid-β-naphthylamides was Arg > Met > Trp > Lys > Leu and for the Co2+ activated enzyme the order of specificity was Lys > Arg > Met > Trp > Leu. The native enzyme hydrolyzed Pro-β-naphthylamide, but not α-Glu-β-naphthylamide; Co2+ activation of the enzyme affected an appreciable rate of hydrolysis of the latter substrate.  相似文献   

9.
The maximum slope of the plot, appearing in the paper of Watari & Isogai (1976), was derived algebraically as a function of allosteric constants c and αmor βm (= m), and the relation between L, c, and αmor βm, was also obtained, where L = ToRo, c = KRKT, αm = FmKR, βm = FmKT, Roand To are concentrations of unligated R and T states respectively, KRand KT are microscopic dissociation constants, and Fm is the ligand concentration at the maximum slope of the plot. When the maximum slope is increased by one, the value becomes Hill constant, n. Nomographs which enable easier estimation of allosteric constants, L and c, were constructed from the two given values, the maximum slope of the plot, n ? 1, and αmor βm, in the cases where the maximum number of ligands, N, was 2 and 4. In the nomograph, log c is plotted against log L2cN keeping the value of the maximum slope of the plot and that of αmor βm constant. These nomographs show that the representation is symmetrical in the cases of L2cN > 1 and L2cN < 1.  相似文献   

10.
11.
An ATPase is demonstrated in plasma membrane fractions of goldfish gills. This enzyme is stimulated by Cl? and HCO3?, inhibited by SCN?.Biochemical characterization shows that HCO3? stimulation (Km = 2.5 mequiv./l) is specifically inhibited in a competitive fashion by SCN? (Ki = 0.25 mequiv./l). The residual Mg2+-dependent activity is weakly is weakly affected by SCN?.In the microsomal fraction chloride stimulation of the enzyme occurs in the presence of HCO3? (Kmfor chloride = 1 mequiv./l); no stimulation is observed in the absence of HCO3?. Thiocyanate exhibits a mixed type of inhibition (Ki = 0.06 mequiv./l) towards the Cl? stimulation of the enzyme.Bicarbonate-dependent ATPase from the mitochondrial fraction is stimulated by Cl?, but this enzyme has a relatively weak affinity for this substrate (Km = 14 mequiv./l).  相似文献   

12.
The α-chymotrypsin-catalyzed hydrolysis rates of p-nitrophenyl cyclopentane-carboxylate (I), p-nitrophenyl indan-2-carboxylate (II), and p-nitrophenyl spiro-[4.4]nonane-2-carboxylate (III) were measured at pH 8.1 in 20% methanol. After correction for variations in reactivity owing to stereoelectronic effects inherent to the substrates, the deacylation rate constants (kc)n of I and II are not significantly different. In (kcKm)n II is 50 times more reactive than I, which demonstrates that the aromatic ring of the former substrate contributes significantly to its reactivity. The nearly equal reactivities of II and III indicate that the enzyme is rather insensitive to the geometry of the nonester-bearing ring of these compounds.  相似文献   

13.
The effect of pH on the kinetic parameters for the chloroperoxidase-catalyzed N-demethylation of N,N-dimethylaniline supported by ethyl hydroperoxide was investigated from pH 3.0 to 7.0. Chloroperoxidase was found to be stable throughout the pH range studied. Initial rate conditions were determined throughout the pH range. The Vmax for the demethylation reaction exhibited a pH optimum at approximately 4.5. The Km for N,N-dimethylaniline increased with decreasing pH, while the Km for ethyl hydroperoxide varied in a manner paralleling Vmax. Comparison of the VmaxKm values for N,N-dimethylaniline and ethyl hydroperoxide indicated that the interaction of N,N-dimethylaniline with chloroperoxidase compound I was rate-limiting below pH 4.5, while compound I formation was rate-limiting above pH 4.5. The log of the VmaxKm for ethyl hydroperoxide was independent of pH, indicating that chloroperoxidase compound I formation is not affected by ionizations in this pH range. The plot of the log of the VmaxKm for N,N-dimethylaniline versus pH indicated an ionization on compound I with a pK of approximately 6.8. The plot of the log of the Vmax versus pH indicated an ionization on the compound I-N,N-dimethylaniline complex, with a pK of approximately 3.1. The results show that chloroperoxidase can demethylate both the protonated and neutral forms of N,N-dimethylaniline (pK approximately 5.0), suggesting that hydrophobic binding of the arylamine substrate is more important in catalysis than ionic bonding of the amine moiety. For optimal catalysis, a residue in the chloroperoxidase compound I-N,N-dimethylaniline complex with a pK of approximately 3.1 must be deprotonated, while a residue in compound I with a pK of approximately 6.8 must be protonated.  相似文献   

14.
Isolation and characterization of isocitrate lyase of castor endosperm   总被引:1,自引:0,他引:1  
Isocitrate lyase (threo-DS-isocitrate glyoxylate-lyase, EC 4.1.3.1) has been purified to homogeneity from castor endosperm. The enzyme is a tetrameric protein (molecular weight about 140,000; gel filtration) made up of apparently identical monomers (subunit molecular weight about 35,000; gel electrophoresis in the presence of sodium dodecyl sulfate). Thermal inactivation of purified enzyme at 40 and 45 °C shows a fast and a slow phase, each accounting for half of the intitial activity, consistent with the equation: At = A02 · e?k1t + A02 · e?k2t, where A0 and At are activities at time zero at t, and k1 and k2 are first-order rate constants for the fast and slow phases, respectively. The enzyme shows optimum activity at pH 7.2–7.3. Effect of [S]on enzyme activity at different pH values (6.0–7.5) suggests that the proton behaves formally as an “uncompetitive inhibitor.” A basic group of the enzyme (site) is protonated in this pH range in the presence of substrate only, with a pKa equal to 6.9. Successive dialysis against EDTA and phosphate buffer, pH 7.0, at 0 °C gives an enzymatically inactive protein. This protein shows kinetics of thermal inactivation identical to the untreated (native) enzyme. Full activity is restored on adding Mg2+ (5.0 mm) to a solution of this protein. Addition of Ba2+ or Mn2+ brings about partial recovery. Other metal ions are not effective.  相似文献   

15.
The parameters Km and kcat were determined for 16 methyl hippurates (CH3OCOCH2NHCOC6H4-X) hydrolyzed by papain. A simple linear relationship is found between log 1Km and the hydrophobic substituent constant π. It is found that log kcat is parabolically related to π. The results with papain are compared with results obtained by Hawkins and Williams with the enzyme bromelain. The two enzymes behave in a similar fashion.  相似文献   

16.
The reaction mechanism of the F1 isozyme of horse liver aldehyde dehydrogenase (EC 1.2.1.3) was investigated using both steady-state and rapid kinetic techniques. Using the steady-state substrate velocity patterns, the NADH inhibition patterns at several aldehyde concentrations, and the substrate analog (adenosine diphosphoribose and chloral hydrate) inhibition patterns, the enzymic catalysis was shown to involve ordered addition of NAD followed by aldehyde. This mechanism was confirmed using the kinetics of the hydrolysis of p-nitrophenyl acetate as an indicator of the dehydrogenase substrate binding. Steady-state experiments with deuteroacetaldehyde showed the V to be unchanged, but the Km increased (Km CH3CDOKm CH3CHO = 3.4). Stopped flow experiments where E-NAD was rapidly mixed with aldehyde showed a burst of NADH formation followed by slower steady-state turnover. This result clearly indicates that the rate limiting step lies after NAD reduction. The NADH off rate (0.7 s?1) as estimated by displacement of NADH from the E-NADH complex upon rapid addition of NAD was found to be very close to the steady-state site turnover number (0.3 s?1). This fact and the relatively small effect of aldehyde R-group on maximal velocity suggest that the slow rate of NADH release contributes significantly to limitation of the enzyme catalytic velocity.  相似文献   

17.
A continuous spectrophotometric assay for human plasma carboxypeptidase N utilizing furylacryloyl-alanyl-lysine is described. Synthesis was made by use of 9-(2-sulfo)fluorenylmethyloxycarbonyl (Sulfmoc) chloride as the N-?-amino-blocking group for lysine. The substrate has the advantage of containing a chromophore which allows difference measurements above 324 nm. The kinetic parameters Km and KcatKm have been determined for furylacryloyl-alanyl-lysine and -arginine. Difference measurements were related to micromoles of lysine or arginine released and were expressed as units.  相似文献   

18.
Antranilate N-acetlytransferase, which is a constitutive enzyme, is responsible for the formation of N-acetylanthranilic acid which accumulated int he culture medium of certain mutants of Aerobacter aerogenes. It has been shown to be dissimilar to serine O-acetyltrasferase and not to be involved in the acetylation of a variety of aliphatic compounds. Aniline and m-aminobenzoic acid are, however, readily acetylated, the Km for the latter compound being the same as that for anthranilic acid, 13 mM. p-Aminobenzoic acid is only slowly acetylated and salicylic acid only acted as an inhibitor of the reaction. N-[3H]Acetyl[1,7-14C2]anthranili acid was prepared but could not be shown to be deacylated for further metabolized when administered to any whole cell, cell extract or toluene-lysed cell preparation.  相似文献   

19.
Initial rate, product inhibition, and isotope rate kinetic studies of pig heart mitochondrial and supernatant malate dehydrogenases, acting upon the nonphysiological substrates, meso-tartrate and 2-keto-3-hydroxysuccinate, are reported. The measured spontaneous keto-enol equilibrium for 2-keto-3-hydroxysuccinate in 0.05 m Tris-acetate (pH 8.0) at 25 °C favors the enol form, dihydroxyfumarate, with an apparent equilibrium constant of 0.036. The enzyme-catalyzed reaction favors meso-tartrate with an apparent equilibrium constant of 1.25 × 10?6, M?1 at pH 8.0. The mechanism apparently remains ordered bi bi for both enzymes when these nonphysiological substrates are used, and the chemical-converting hydride transfer step becomes more rate limiting for both enzymes. This conclusion is supported by VHVD and (VHKH)VDKD values of 2.6 and 3.1, respectively, for the mitochondrial enzyme and 1.9 and 2.9, respectively, for the supernatant enzyme.  相似文献   

20.
NADH oxidase activity was detected in the 105,000g supernatant (“soluble”) fraction of Trichomonas vaginalis and the enzyme was purified 50-fold by centrifugation, ammonium sulfate precipitation, Sephadex G-200, and DEAE-Sephadex A-25 chromatography. The ratio of oxygen uptake to NADH oxidation was approximately one-half. Addition of catalase did not affect the rate of oxygen uptake elicited by NADH. Since the purified fraction was free from interfering enzymes, the postulated reaction is as follows: NADH + H+ + 12 = NAD+ + H2O. Among numerous substances tested, only NADH was a functional substrate, whereas NADPH was not oxidized. The purified enzyme had a Vmax of 16.5 μmole of oxygen consumed/min/mg protein, and the apparent Km for NADH was 7.4 μM. Substrate inhibition was observed at 3.7 mM NADH. The purified NADH oxidase was competitively inhibited by NAD+ as well as by NADP+ with 50% inhibition at 1 and 5 mM, respectively. The enzyme was also markedly inhibited by p-chloromercuribenzoate, hydrogen peroxide, and transient metal-chelators such as bathophenanthroline or o-phenanthroline. A flavoprotein antagonist, atebrin was slightly less inhibitory. Various quinones, flavin nucleotides and artificial dyes, except for p-benzoquinone, ferricyanide and cytochrome c, did not function in accepting electrons from NADH oxidase. These three compounds, however, were still poor electron acceptors in the enzymatic reaction suggesting that the trichomonad NADH oxidase has little diaphorase activity. All of these findings indicate that T. vaginalis has an unique NADH oxidizing enzyme in that H2O seems to be the prdouct of oxygen reduction. This NADH oxidase appears important in the aerobic metabolism of this parasite.  相似文献   

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