The hummingbird community of a lowland Amazonian rainforest

Between October 1987 and September 1989, the British Ornithologists' Union Colombia Expedition recorded 16 species of hummingbird at Matamatá in the Amacayacu National Park, Amazonas, Colombia. Most of these species were resident breeders at the study site although two appeared to be local migrants. Six species of hermit hummingbirds (subfamily Phaethornithinae) occurred at Matamatá; although very similar in general morphology and behaviour, they showed different preferences for habitat, food plants and foraging technique. Hermits were predominant in the forest, but in areas of secondary vegetation and along riverine borders, "typical" hummingbirds (subfamily Trochilinae) were more common. The study site consisted of terra firme and várzea forest and an area of riverine secondary vegetation and contained around 60 species of flowering plants visited by hummingbirds. In contrast with most groups of organisms, hummingbirds and hummingbird-pollinated plants had similar species diversity in primary forest and secondary habitats. The overall abundance of hummingbirds and flowers was significantly higher in areas of riverine secondary growth. The hummingbird community at Matamatá is remarkably species rich when compared with study sites elsewhere in North and South America. However, random null model comparisons among Amazonian hummingbird communities reveal that they share many characteristics in their structure and show a high degree of species overlap.     

Seasonal and interannual variation of bacterial production in lowland rivers of the Orinoco basin

1. We examined the influence of hydrologic seasonality on temporal variation of planktonic bacterial production (BP) in relatively undisturbed lowland rivers of the middle Orinoco basin, Venezuela. We sampled two clearwater and two blackwater rivers over 2 years for dissolved organic carbon (DOC), chlorophyll, phosphorus and bacterial abundance to determine their relationship to temporal variation in BP. 2. Dissolved organic carbon concentration was greater in blackwater (543–664 μm ) than in clearwater rivers (184–240 μm ), and was generally higher during periods of rising and high water compared with low water. Chlorophyll concentration peaked (3 μg L^?1) during the first year of study when discharge was lowest, particularly in blackwater rivers. Soluble reactive phosphorus (SRP) was very low in the study rivers (<3.8 μg L^?1) and concentration increased during low water. 3. Average BP was higher in clearwater (0.20–0.26 μg C L^?1 h^?1) than in blackwater rivers (0.14–0.17 μg C L^?1 h^?1), although mean bacterial abundance was similar among rivers (0.6–0.8 × 10⁶ cells mL^?1). 4. Periods of higher chlorophyll a concentration (low water) or flushing of terrestrial organic material (rising water) were accompanied by higher BP, while low BP was observed during the period of high water. 5. Interannual variation in BP was influenced by variations in discharge related to El Niño Southern Oscillation events. 6. Seasonal variation in BP in the study rivers and other tropical systems was relatively small compared with seasonal variation in temperate rivers and lakes. In addition to the low seasonal variation of temperature in the tropics, low overall human disturbance could result in less variation in the inputs of nutrients and carbon to the study rivers compared with more disturbed temperate systems.     

Neighbourhood abundance and small-tree survival in a lowland Bornean rainforest

Conspecific effects of neighbours on small-tree survival may have a role in tree population dynamics and community composition of tropical forests. This notion was tested with data from two 4-ha plots in lowland forest at Danum, Sabah (Borneo), for a 21-year interval (censuses at 1986, 1996, 2001, 2007). Species with ≥45 focal trees 10 to <100 cm stem girth per plot in 1986 were selected. Logistic regressions fitted mean focal tree size and mean inverse-distance-weighted basal area abundance of neighbours (within 20 m), for the periods over which each focus tree was alive. Coefficients of variation of neighbourhood basal area abundance, both spatially and temporally, quantified the changing environment of each focus tree. Fits were critically and individually evaluated, with corrections for spatial autocorrelation. Conspecific effects at Danum was generally very weak or non-existent: species’ mortality rates varied also across plots. The main reasons appear to be that (1) species were not dense enough to interact despite frequent although weak spatial aggregation, and their neighbourhoods were highly differing in species composition; and (2) these neighbourhoods were highly variable temporally, meaning that focus trees experienced stochastically fluctuating neighbourhood environments. Only one species, Dimorphocalyx muricatus, showed strong conspecific effects (varying between plots) which can be explained by its distinct ecology. This understorey species is highly aggregated on ridges and is drought-tolerant. That this functionally and habitat-specialized species, has implied intraspecific density-dependent feedback in its dynamics is a remarkable indication of the overall processes maintaining stability of the Danum forest.     

Effects of nitrogen and phosphorus fertilization in a lowland evergreen rainforest

A nutrient addition experiment was set up in August 1993 in a species-rich primary lowland dipterocarp forest in Barito Ulu, Central Kalimantan, Indonesia. The following treatments were applied: control, +N, +P and +NP. There were five blocks of four 50 m x 50 m plots with a separate treatment for each plot. Fine litterfall was measured on all the plots from 1 May 1994 for 12 months. Litterfall mass and phosphorus concentrations were significantly higher in all the fertilizer treatments compared with the controls. All trees (> or = 10 cm dbh) were measured in August 1993 and in August 1998, and there was no significant girth increment response to fertilization in dipterocarps or non-dipterocarps. Dipterocarps of the red meranti group showed a doubling of girth increment in the +NP treatment, however, the difference from the control fell short of significance.     

Photosynthetic responses of Miconia species to canopy openings in a lowland tropical rainforest

We examined the photosynthetic acclimation of three tropical species of Miconia to canopy openings in a Costa Rican rainforest. The response of photosynthesis to canopy opening was very similar in Miconia affinis, M. gracilis, and M. nervosa, despite differences in growth form (trees and shrubs) and local distributions of plants (understory and gap). Four months after the canopy was opened by a treefall, photosynthetic capacity in all three species had approximately doubled from closed canopy levels. There were no obvious signs of high light damage after treefall but acclimation to the gap environment was not immediate. Two weeks after treefall, A_max, stomatal conductance, apprarent quantum efficiency, and dark respiration rates had not changed significantly from understory values. The production of new leaves appears to be an important component of light acclimation in these species. The only variables to differ significantly among species were stomatal conductance at A_max and the light level at which assimilation was saturated. M. affinis had a higher stomatal conductance which may reduce its water use efficiency in gap environments. Photosynthesis in the more shade-tolerant M. gracilis saturated at lower light levels than in the other two species. Individual plant light environments were assessed after treefall with canopy photography but they explained only a small fraction of plant variation in most measures of photosynthesis and growth. In conclusion, we speculate that species differences in local distribution and in light requirements for reproduction may be more strongly related to species differences in carbon allocation than in carbon assimilation.     

Determinants of mortality across a tropical lowland rainforest community

Tree mortality is an important process determining forest dynamics. However, in species‐rich tropical forests it is largely unknown, how species differ in their response of mortality to resource availability and individual condition. We use a hierarchical Bayesian approach to quantify the impact of light availability, tree size and past growth on mortality of 284 woody species in a 50‐ha long‐term forest census plot in Barro Colorado Island, Panama. Light reaching each individual tree was estimated from yearly vertical censuses of vegetation density. Across the community, 78% of the species showed increasing mortality with increasing light. Considering species individually, just 29 species showed a significant response to light, all with increasing mortality at high light. Past growth had a significant impact on all but three species, with higher growth leading to lower mortality. For the majority of species, mortality decreased sharply with diameter in saplings, then levelled off or increased slightly towards the maximum diameter of the species. Diameter had the biggest impact on mortality, followed by past growth and finally light availability. Our results challenge many previous reports of higher mortality in shade, and we suggest that it is crucial to control for size effects when assessing the impact of environmental conditions on mortality.     

Stratification and diel activity of arthropods in a lowland rainforest in Gabon

The abundance, activity and species richness of arthropods, particularly of insect herbivores, were investigated in the upper canopy and understorey of a lowland rainforest at La Makandé, Gabon. In total 14 161 arthropods were collected with beating, flight interception and sticky traps, from six canopy sites, during the day and at night, from mid-January to mid-March 1999. The effects of stratum were most important, representing between 40 and 70% of the explained variance in arthropod distribution. Site effects represented between 20 and 40% of the variance and emphasized the néed for replication of sampling among canopy sites. Time effects (diel activity) explained a much lower percentage of variance (6–9%). The density and abundance of many arthropod taxa and species were significantly higher in the upper canopy than in the understorey. Arthropod activity was also higher during the day than at night. In particular, insect herbivores were 2.5 times more abundant and twice as speciose in the upper canopy than in the understorey, a probable response to the greater and more diverse food resources in the former stratum. Faunal overlap between the upper canopy and understorey was low. The most dissimilar herbivore communities foraged in the understorey at night and the upper canopy during the day. Further, a taxonomic study of a species-rich genus of herbivore collected there (Agrilus , Coleoptera Buprestidae) confirmed that the fauna of the upper canopy was different, diverse and very poorly known in comparison to that of the understorey. Herbivore turnover between day and night was rather high in the upper canopy and no strong influx of insect herbivores from lower foliage to the upper canopy was detected at night. This suggests that insect herbivores of the upper canopy may be resident and well adapted to environmental conditions there.     

The seasonal and interannual dynamics of zooplankton in Lake Teletskoye

Long-term data on the specific composition, seasonal abundance, and biomass dynamics of Lake Teletskoye zooplankton are given. The list of rotiferans and lower crustaceans includes 117 taxa of specific and subspecific rank. The dominating complex includes 10 species and remains unchanged during the whole period of investigations. The seasonal dynamics of zooplankton abundance and biomass in this deep and highly lotic oligotrophic waterbody is characterized by one peak of development noted in the second half of the summer. The rapid increase of Conochilus unicornis (Rousselet) rotifer abundance in conditions of high water level and low temperature is noted in the interannual aspect.     

Community phenological patterns of a lowland tropical rainforest in north-eastern Australia

Leaf-fall, leaf-flush (newly expanded leaves), flowering and fruiting were recorded monthly between April 1982 and May 1985 in 703 individuals of 99 species of trees, shrubs and herbs in a logged lowland, complex rainforest. Weekly water availability and demand were modelled using pan evaporation, rainfall, and a range of estimated maximum soil water storage. The water balance model indicated that rainfall distribution was an inadequate measure of the seasonal availability of water for growth and reproduction. Intermittent shortages in available water were predicted between October and February, well into what is the wettest season of the year in terms of long-term rainfall averages. Adequate water was available in soil water stores through most of the August–October ‘dry season’. Leaf-fall, flowering, and fruiting all followed distinct seasonal patterns although appreciable levels of activity occurred in all months. Community leaf-fall increased rapidly following an annual low in the very wet, February–May period, to a peak in August. The rapid increase in leaf-fall activity was accompanied by pronounced depressions in flowering and leaf-flushing and coincided with the period of minimum temperatures and insolation. There was no evidence to suggest that this leaf-fall peak was accompanied or induced by drought. This ‘winter’ was followed by rising temperatures and insolation at a time when adequate soil water was usually available, and flowering activity (number of species, number of individuals, and total abundance) increased rapidly in August and peaked from September to October. The flowering peak was accompanied by a major leaf-flush. Leaf-flushing continued intermittently from October to February, a period characterized by maximum temperature, maximum insolation, and periods of predicted water stress when soil water stores were depleted during short, rainless periods. A second peak in leaf-flushing coincided with the wet in March-April. This was accompanied by a relatively small increase in leaf-fall activity. Fruiting showed a bimodal peak from October to April each year. Prediction of functional relationships between climate and species and individual behaviour from community phenological patterns was considered to be inappropriate.     

Effects of climate warming on the production of the pioneer moss Racomitrium japonicum: seasonal and year-to-year variations

Journal of Plant Research - Pioneer mosses are among the dominant vegetation in the early stages of xeric successions. Recent climate warming may have a significant effect on the productivity of...     

Diversity and distribution of ground-dwelling ants in a lowland rainforest in southeast Cameroon

Detailed information on the ground-dwelling ant diversity and distribution in the rainforests of the Congo Basin is lacking so far. A new ant species list from a continuous mixed secondary lowland rainforest on the northern periphery of the Dja Biosphere Reserve in southeast Cameroon is presented. We investigated the effect of vegetation type on ant species density, activity and composition. Ants were collected by pitfall trapping in seven vegetation types in each of three seasons during 12 months in 2003 and 2004–2005. Our site in Cameroon had a total observed ant diversity of 145 species. Vegetation type significantly influenced the ground-dwelling and -foraging (arboreal) ant assemblages. Differences in species density, activity and composition between vegetation types were explained not only by soil type (hydromorphous – terra firme), but also by developmental stage of vegetation types. The highly inundated Raphia-swamp had the lowest ant species density and activity. Older secondary forests still had a different species composition than near primary forest even after 25 years of recovery after anthropogenic disturbance. Finally, the high ant species number captured by our pitfalls, the absence of the invasive exotic ant Wasmannia auropunctata and the high Dorylus (Anomma) army ant diversity confirm the importance of the Cameroonian rainforest for biodiversity conservation programs. Electronic supplementary material The online version of this article (doi:) contains supplementary material, which is available to authorized users. Received 4 October 2006; revised 4 June 2007; accepted 2 July 2007.     

Effects of seasonal and interannual variations in leaf photosynthesis and canopy leaf area index on gross primary production of a cool-temperate deciduous broadleaf forest in Takayama, Japan

Revealing the seasonal and interannual variations in forest canopy photosynthesis is a critical issue in understanding the ecological mechanisms underlying the dynamics of carbon dioxide exchange between the atmosphere and deciduous forests. This study examined the effects of temporal variations of canopy leaf area index (LAI) and leaf photosynthetic capacity [the maximum velocity of carboxylation (V _cmax)] on gross primary production (GPP) of a cool-temperate deciduous broadleaf forest for 5 years in Takayama AsiaFlux site, central Japan. We made two estimations to examine the effects of canopy properties on GPP; one is to incorporate the in situ observation of V _cmax and LAI throughout the growing season, and another considers seasonality of LAI but constantly high V _cmax. The simulations indicated that variation in V _cmax and LAI, especially in the leaf expansion period, had remarkable effects on GPP, and if V _cmax was assumed constant GPP will be overestimated by 15%. Monthly examination of air temperature, radiation, LAI and GPP suggested that spring temperature could affect canopy phenology, and also that GPP in summer was determined mainly by incoming radiation. However, the consequences among these factors responsible for interannual changes of GPP are not straightforward since leaf expansion and senescence patterns and summer meteorological conditions influence GPP independently. This simulation based on in situ ecophysiological research suggests the importance of intensive consideration and understanding of the phenology of leaf photosynthetic capacity and LAI to analyze and predict carbon fixation in forest ecosystems.     

Canopy phylogenetic, chemical and spectral assembly in a lowland Amazonian forest

? Canopy chemistry and spectroscopy offer insight into community assembly and ecosystem processes in high-diversity tropical forests, but phylogenetic and environmental factors controlling chemical traits underpinning spectral signatures remain poorly understood. ? We measured 21 leaf chemical traits and spectroscopic signatures of 594 canopy individuals on high-fertility Inceptisols and low-fertility Ultisols in a lowland Amazonian forest. The spectranomics approach, which explicitly connects phylogenetic, chemical and spectral patterns in tropical canopies, provided the basis for analysis. ? Intracrown and intraspecific variation in chemical traits varied from 1.4 to 36.7% (median 9.3%), depending upon the chemical constituent. Principal components analysis showed that 14 orthogonal combinations were required to explain 95% of the variation among 21 traits, indicating the high dimensionality of canopy chemical signatures among taxa. Inceptisols and lianas were associated with high leaf nutrient concentrations and low concentrations of defense compounds. Independent of soils or plant habit, an average 70% (maximum 89%) of chemical trait variation was explained by taxonomy. At least 10 traits were quantitatively linked to remotely sensed signatures, which provided highly accurate species classification. ? The results suggest that taxa found on fertile soils carry chemical portfolios with a deep evolutionary history, whereas taxa found on low-fertility soils have undergone trait evolution at the species level. Spectranomics provides a new connection between remote sensing and community assembly theory in high-diversity tropical canopies.     

A note on amphibian decline in a central Amazonian lowland forest

The massive reductions in amphibian populations taking place across the globe are unprecedented in modern times. Within the Neotropics, the enigmatic decline of amphibians has been considered predominantly a montane phenomenon; however, recent evidence suggests amphibian and reptile populations in lowland forests in Central America are waning as well. Unfortunately, very little baseline data are available for conducting large scale time series studies in order to further investigate and confirm declines in the lowland forests of tropical America. Here we compare leaf litter herpetofauna abundance at sites in the Central Amazon, sampled first in 1984–1985 and again in 2007. We find no evidence for a decline in abundance or biomass of amphibians over a period of 22 years at this site. This conclusion differs markedly from the decline of 75% in amphibian populations over 35 years at a lowland site in Costa Rica. To explore potential declines in lowland Neotropical amphibian populations in detail, we suggest that existing baseline data be comprehensively compiled and analyzed for previously sampled sites and that these sites be re-sampled using comparable methodologies.     

The role of interannual,seasonal, and synoptic climate on the carbon isotope ratio of ecosystem respiration at a semiarid woodland

The terrestrial carbon cycle is influenced by environmental variability at scales ranging from diurnal to interannual. Here, we present 5‐years of growing season (day 131–275) observations of the carbon isotope ratio of ecosystem respiration (δ¹³C_R) from a semiarid woodland. This ecosystem has a large necromass component resulting from 97%Pinus edulis mortality in 2002, is dominated by drought‐tolerant Juniperus monosperma trees, and experiences large variability in the timing and intensity of seasonal and synoptic water availability. Mean growing season δ¹³C_R was remarkably invariant (?23.57±0.4‰), with the exception of particularly enriched δ¹³C_R in 2006 following a winter with anomalously low snowfall. δ¹³C_R was strongly coupled to climate during premonsoon periods (～May to June), including fast (≤2 days) responses to changes in crown‐level stomatal conductance (G_c) and vapor pressure deficit (vpd) following rain pulses. In contrast, δ¹³C_R was relatively decoupled from G_c and environmental drivers during monsoon and postmonsoon periods (July–August and September, respectively), exhibiting only infrequent couplings of δ¹³C_R to vpd and soil water content (SWC) with longer lags (～8 days) and variable response slopes (both positive and negative). Notably, δ¹³C_R exhibited consistent dynamics after rainfall events, with depleted δ¹³C_R occurring within 1 h, progressive hourly δ¹³C_R enrichment over the remainder of the night, and net δ¹³C_R depletions over the multiple nights postevent in monsoon and postmonsoon periods. Overall this ecosystem demonstrated strong dependence of δ¹³C_R on precipitation, with an apparent dominance by the autotrophic δ¹³C signal in premonsoon periods when deep soil moisture is abundant and surface soil moisture is low, and weaker coupling during monsoonal periods consistent with increasing heterotrophic dominance when deep soil moisture has declined and surface moisture is variable.     

An Amazonian rainforest and its fragments as a laboratory of global change

We synthesize findings from one of the world's largest and longest‐running experimental investigations, the Biological Dynamics of Forest Fragments Project (BDFFP). Spanning an area of ∼ 1000 km² in central Amazonia, the BDFFP was initially designed to evaluate the effects of fragment area on rainforest biodiversity and ecological processes. However, over its 38‐year history to date the project has far transcended its original mission, and now focuses more broadly on landscape dynamics, forest regeneration, regional‐ and global‐change phenomena, and their potential interactions and implications for Amazonian forest conservation. The project has yielded a wealth of insights into the ecological and environmental changes in fragmented forests. For instance, many rainforest species are naturally rare and hence are either missing entirely from many fragments or so sparsely represented as to have little chance of long‐term survival. Additionally, edge effects are a prominent driver of fragment dynamics, strongly affecting forest microclimate, tree mortality, carbon storage and a diversity of fauna. Even within our controlled study area, the landscape has been highly dynamic: for example, the matrix of vegetation surrounding fragments has changed markedly over time, succeeding from large cattle pastures or forest clearcuts to secondary regrowth forest. This, in turn, has influenced the dynamics of plant and animal communities and their trajectories of change over time. In general, fauna and flora have responded differently to fragmentation: the most locally extinction‐prone animal species are those that have both large area requirements and low tolerance of the modified habitats surrounding fragments, whereas the most vulnerable plants are those that respond poorly to edge effects or chronic forest disturbances, and that rely on vulnerable animals for seed dispersal or pollination. Relative to intact forests, most fragments are hyperdynamic, with unstable or fluctuating populations of species in response to a variety of external vicissitudes. Rare weather events such as droughts, windstorms and floods have had strong impacts on fragments and left lasting legacies of change. Both forest fragments and the intact forests in our study area appear to be influenced by larger‐scale environmental drivers operating at regional or global scales. These drivers are apparently increasing forest productivity and have led to concerted, widespread increases in forest dynamics and plant growth, shifts in tree‐community composition, and increases in liana (woody vine) abundance. Such large‐scale drivers are likely to interact synergistically with habitat fragmentation, exacerbating its effects for some species and ecological phenomena. Hence, the impacts of fragmentation on Amazonian biodiversity and ecosystem processes appear to be a consequence not only of local site features but also of broader changes occurring at landscape, regional and even global scales.     

Photosynthetic responses to light in seedlings of selected Amazonian and Australian rainforest tree species

Summary Seedlings of the Caesalpinoids Hymenaea courbaril, H. parvifolia and Copaifera venezuelana, emergent trees of Amazonian rainforest canopies, and of the Araucarian conifers Agathis microstachya and A. robusta, important elements in tropical Australian rainforests, were grown at 6% (shade) and 100% full sunlight (sun) in glasshouses. All species produced more leaves in full sunlight than in shade and leaves of sun plants contained more nitrogen and less chlorophyll per unit leaf area, and had a higher specific leaf weight than leaves of shade plants. The photosynthetic response curves as a function of photon flux density for leaves of shade-grown seedlings showed lower compensation points, higher quantum yields and lower respiration rates per unit leaf area than those of sun-grown seedlings. However, except for A. robusta, photosynthetic acclimation between sun and shade was not observed; the light saturated rates of assimilation were not significantly different. Intercellular CO₂ partial pressure was similar in leaves of sun and shade-grown plants, and assimilation was limited more by intrinsic mesophyll factors than by stomata. Comparison of assimilation as a function of intercellular CO₂ partial pressure in sun- and shade-grown Agathis spp. showed a higher initial slope in leaves of sun plants, which was correlated with higher leaf nitrogen content. Assimilation was reduced at high transpiration rates and substantial photoinhibition was observed when seedlings were transferred from shade to sun. However, after transfer, newly formed leaves in A. robusta showed the same light responses as leaves of sun-grown seedlings. These observations on the limited potential for acclimation to high light in leaves of seedlings of rainforest trees are discussed in relation to regeneration following formation of gaps in the canopy.     

Spatio-temporal patterns of ground-dwelling ant assemblages in a lowland rainforest in southeast Cameroon

We studied the spatio-temporal patterns of ground-dwelling and -foraging ant assemblages in a continuous mixed secondary lowland rainforest on the northern periphery of the Dja Biosphere Reserve in southeast Cameroon. The effect of season and of the interaction of season with vegetation type on ant species density, activity and composition were investigated. We also checked for a possible impact of army ant activity on the ant assemblage. Ants were collected by pitfall trapping in seven vegetation types in each of three seasons during 12 months in 2003 and 2004–2005. Season significantly influenced the ground-dwelling ant assemblage. The late wet season had the lowest ant species density and a different species composition than the early wet and the dry season. Also inter-annual variation in ant species density and composition was detected and could partly be explained by an influence of Dorylus activity. In general, vegetation type and inter-annual variation had a larger influence on the ground-ant assemblage than season. Significant effects of interactions between season, year, vegetation type and army ants on the ant assemblage confirm that also in African rainforests ant assemblages are extremely dynamic and depend on a complex combination of availability of food resources, nest sites and predators. Received 4 October 2006; revised 4 June 2007; accepted 2 July 2007.     

The seasonal and interannual dynamics of centric diatoms in the Kuibyshev Reservoir

Samples of centric diatom algae from the plankton of the Kuibyshev Reservoir collected in years with different hydro-meteorological conditions (1989 and 1990) have been studied using light and scanning electron microscopy technique. Twenty-nine species, varieties, and forms of Centrophyceae, including two species new for the algoflora of the Volga River plankton, have been discovered. The main body of the dominant species is formed by algae with a high frequency of occurrence. The seasonal dynamics of abundance is characterized by spring peaks formed mainly by small-celled algae and less regular late fall maximums formed by large-celled forms. During these periods the abundance of Centrophyceae determines the level of phytoplankton development in general. Under stable species richness of algae and seasonal dynamics of their abundance, the average number of Centrophyceae during the hot and low-water year of 1989 reached 3.6 million cells/l; during the cold and high-water year of 1990, there were twice as few: 1.9 million cells/l.