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1.
Head-tail connector of bacteriophage lambda   总被引:3,自引:0,他引:3  
The head-tail connector of phage λ, a protein knob inside the head shell to which the tail attaches, is composed primarily of head protein gpB 4 and its cleaved form gpB1. All of the gpB and gpB1 in the virion is located in the connector. gpFII, the protein that is thought to form the site on the head to which the tail binds, is also located in the connector. Head proteins gpE, gpD, X1 and X2 are not components of the connector. These assignments were made by disrupting virions with guanidine hydrochloride, in such a way that heads and tails separate with the connectors attached to the tails, and determining which head proteins co-purify with the tails.We find that lysates from a λE? infection contain a high proportion of tails with connectors attached. (Gene E codes for the major component of the head shell.) Connectors are also present on tails from a λE?C? infection, arguing that gpE, gpC, and their processed forms, X1 and X2, are all unnecessary for assembly of biologically competent connectors. The gpB in the connectors on E? and E?C? tails is in the uncleaved form. Connectors are not seen on tails from infections by λE?B?, λE?FII?, or λE? in a groE? host.  相似文献   

2.
Precursors of the tail of bacteriophage λ have been detected by measurements of in vitro complementation activities and serum blocking activity in sucrose gradients of lysates defective in tail genes.On the basis of these measurements, a pathway for the assembly of the λ tail is proposed:The morphogenesis of the λ tail starts from the tail fiber (product of gene J) located at the distal end of the tail, and proceeds to the proximal end. Gene J by itself produces a 15 S structure with serum blocking activity but without any detectable in vitro complementation activity, which may be the least advanced precursor of the λ tail or an abortive product. Functions of genes J, I, K, L are required for the formation of a 15 S precursor that has in vitro complementation activities with J, I, K and L lysates and serum blocking activity. If the products of genes G and H act on the latter 15 S precursor, a 25 S precursor is made, but this precursor seems either to be in equilibrium with the 15 S precursor or to degrade easily into the 15 S precursor. Gene M has a function of stabilizing the 25 S precursor. After the action of gene M product, the 25 S precursor is ready to serve as a nucleus on which the product of gene V (the major tail protein) assembles. However, gene U product is also necessary at this step for the correct assembly of the major tail protein on the 25 S precursor. Without gene U product the assembly of the major tail protein does not stop at the correct length and a polytail is formed instead of a morphologically normal tail. Finally, gene Z product acts on the morphologically normal tail and makes it a biologically active tail. Without the action of gene Z product, the defective tail binds to a head and forms a phage-like particle which is only very weakly infectious. (The position of gene T in the pathway is not determined, because no sus mutant is available in gene T.)Two abnormal, less efficient pathways are also present in vitro. (1) If gene U product acts on a polytail in an U lysate, the polytail finally binds to a head and forms a phage particle with an extra long tail which is infectious to a small extent. (2) The function of gene K seems to be bypassed to some extent: K lysates accumulate particles which sediment as fast as normal phage and which are complemented by other tail lysates.  相似文献   

3.
Lysates of bacteriophage λ, mutant in the head gene D, contain a minor amount of defective particles which can be isolated and complemented to infective particles by adding purified gene D product. The defective particles contain DNA with a specific infectivity in the helper assay of about 10% of phage DNA. This DNA is firmly held in the capsid and a tail is attached. Although the particles adsorb to sensitive bacteria, the DNA is not injected. The complemented, infectious particles differ from normal phage by having a lower density. After growing in a permissive host, phage particles of normal density are produced. The implications of the ability of gene D protein to bind to otherwise complete particles as a last step are discussed.  相似文献   

4.
tRNase Z is an essential endonuclease responsible for tRNA 3′-end maturation. tRNase Z exists in a short form (tRNase ZS) and a long form (tRNase ZL). Prokaryotes have only tRNase ZS, whereas eukaryotes can have both forms of tRNase Z. Most eukaryotes characterized thus far, including Saccharomyces cerevisiae, Caenorhabditis elegans, Drosophila melanogaster, and humans, contain only one tRNase ZL gene encoding both nuclear and mitochondrial forms of tRNase ZL. In contrast, Schizosaccharomyces pombe contains two essential tRNase ZL genes (trz1 and trz2) encoding two tRNase ZL proteins, which are targeted to the nucleus and mitochondria, respectively. Trz1 protein levels are notably higher than Trz2 protein levels. Here, using temperature-sensitive mutants of trz1 and trz2, we provide in vivo evidence that trz1 and trz2 are involved in nuclear and mitochondrial tRNA 3′-end processing, respectively. In addition, trz2 is also involved in generation of the 5′-ends of other mitochondrial RNAs, whose 5′-ends coincide with the 3′-end of tRNA. Thus, our results provide a rare example showing partitioning of the nuclear and mitochondrial tRNase ZL activities between two different proteins in S. pombe. The evolution of two tRNase ZL genes and their differential expression in fission yeast may avoid toxic off-target effects.  相似文献   

5.
The availability of antisera with specificity forλ light chains which have the Mcg- or the non-Mcg-associated amino acid C-region sequence alternations has made possible our immunochemical differentiation of humanλ chains as Mcg+ or Mcg?. One antiserum, prepared against an Mcg+ λ chain having the Mcg-associated C-region amino acid residues (asparaginyl, threonyl, and lysyl at positions 116, 118, and 167, respectively), had specificity forλ chains with this C-region sequence. A second antiserum, prepared against an Mcg? λ chain having the non-Mcg-associated C-region residues (alanyl, seryl, and threonyl at these same three respective positions), had specificity forλ chains with this alternative type of C-region sequence. Immunodiffusion analyses ofλ chains of known amino acid sequence confirmed their chemical classification as Mcg or non-Mcg in type. No association between a particular V-regionλ-chain subgroup and the Mcg factor was evident. Based on sequence and serological analyses, ~ 11 percent ofλ light chains have the Mcg-related C-region sequence alternations. The immunochemical recognition of both Mcg+ and Mcg? light chains isolated from the IgG of normal individuals corroborated the isotypic nature of the Mcg factor. Despite the fact that the Mcg-related substitutions are in the Cλ, the loss of Mcg antigenicity upon cleavage of Mcg+ and Mcg? λ chains into VL and CL indicates that the intact light polypeptide chain is essential for expression of the Mcg antigenic factor.  相似文献   

6.
We have examined a series of lambda proheads and mature structures by small angle X-ray diffraction. This technique yields spherically averaged density distributions and some information about surface organization of particles in solution.We find that gpE 2 of proheads and heads forms shells with one of two radii; A?, B?, groE?, and Nu3? proheads have shells of radius 246 Å, while mature heads, urea-treated A? proheads and C? proheads have a radius of 300 Å. The expansion of proheads to mature heads is accompanied by a corresponding decrease in the thickness of the shell. groE? proheads contain a core. This core is lost spontaneously from the structure and is only observed if the structures are fixed with glutaraldehyde prior to examination by X-ray diffraction or electron microscopy.C? proheads expand to mature head size spontaneously. A preparation of C? proheads which was fixed with glutaraldehyde at an early stage of the purification had the smaller, prohead radius. Unfixed particles from this preparation expanded to the mature head size after further purification and standing in the cold for several days. This result suggests that gpC may be involved in regulating head expansion.The radii of the protein shells of mature heads are identical for a series of phages that contain between 78% and 105% of the wild-type complement of DNA, and this radius is the same as that of proheads expanded in the absence of DNA. These results with phage lambda indicate that assembly of a double shell structure composed of coat and scaffolding protein, followed by expansion to a larger shell containing only coat protein is a general feature of the morphogenesis of dsDNA phages.  相似文献   

7.
8.
9.
The functions of ten known late genes are required for the intracellular assembly of infectious particles of the temperate Salmonella phage P22. The defective phenotypes of mutants in these genes have been characterized with respect to DNA metabolism and the appearance of phage-related structures in lysates of infected cells. In addition, proteins specified by eight of the ten late genes were identified by sodium dodecyl sulfate/polyacrylamide gel electrophoresis; all but two are found in the mature phage particle. We do not find cleavage of these proteins during morphogenesis.The mutants fall into two classes with respect to DNA maturation; cells infected with mutants of genes 5, 8, 1, 2 and 3 accumulate DNA as a rapidly sedimenting complex containing strands longer than mature phage length. 5? and 8? lysates contain few phage-related structures. Gene 5 specifies the major head structural protein; gene 8 specifies the major protein found in infected lysates but not in mature particles. 1?, 2? and 3? lysates accumulate a single distinctive class of particle (“proheads”), which are spherical and not full of DNA, but which contain some internal material. Gene 1 protein is in the mature particle, gene 2 protein is not.Cells infected with mutants of the remaining five genes (10, 26, 16, 20 and 9) accumulate mature length DNA. 10? and 26? lysates accumulate empty phage heads, but examination of freshly lysed cells shows that many were initially full heads. These heads can be converted to viable phage by in vitro complementation in concentrated extracts. 16? and 20? lysates accumulate phage particles that appear normal but are non-infectious, and which cannot be rescued in vitro.From the mutant phenotypes we conclude that an intact prohead structure is required to mature the virus DNA (i.e. to cut the overlength DNA concatemer to the mature length). Apparently this cutting occurs as part of the encapsulation event.  相似文献   

10.
A generalized transducing bacteriophage of Myxococcus xanthus has been examined. The phage particle consists of an isometric head and a contractile tail. The genome of the phage is a linear DNA molecule of molecular weight 39 ± 2.1 × 106, which contains the normal DNA bases 70% of which are guanosine + cytosine. No overall heterogeneity of base composition is present. The DNA does not carry easily detectable cohesive ends nor is it cyclically permuted. It does contain a large and somewhat variable terminal redundancy. Heating phage particles in the presence of EDTA causes tail sheath contraction and ejection of DNA, some of which remains attached to the tail. Digestion of tail-bound DNA with restriction enzymes shows that the phage tail can be attached to either end of the DNA. Thus the DNA probably contains recognition sites for the packaging of its DNA at both ends. These results suggest possible mechanisms for the genesis of transducing particles by phage MX4.  相似文献   

11.
We have studied the role of the red and gam genes in lambda replication, after infection of wild type and two recombination deficient hosts. Our results show that the rate of phage DNA replication is abnormally low in the absence of red function, in rec+ as well as rec? (A? and A?B?) bacteria. It appears that the virus general recombination proteins play some role in lambda replication that cannot be assumed by the general recombination proteins of its bacterial host. The red? defect in replication results in a decrease in the total amount of intracellular phage DNA. This DNA, nevertheless, seems normal in structure and is matured and packaged with good efficiency.In rec+ and recA? hosts infected with gam? mutants, the rate of lambda replication is also low, but in this case, abnormal DNA structures are produced at late times. The gam mutation seems to alter the program of replication such that circular molecules are produced not only at early times, but continuously, throughout the lytic cycle. This, and other facts, suggest that the gam protein is required for the transition from “early” to “late” replication. This requirement for gam function is not observed in recA?B? hosts, in which gam mutants replicate at a normal rate and produce DNA indistinguishable from that made by wild type phage. Thus, the gam requirement seems to involve an interaction of this phage protein with the product of the host's recB gene. Other evidence for such interaction comes from our finding that, in vivo, the gam protein does inhibit presumed action of the host's BC nuclease.In the gam? mutant infections, which are blocked in late replication, absence of a general recombination system seems to create a severe defect in maturation of intracellular phage DNA. This defect, unlike the one affecting λ replication rate, can be alleviated by either the red or rec functions and is correlated with the inability of the mutant phages to make DNA concatemers. Since other late functions (i.e. late messenger RNA production) appear to be normal, we conclude that concatemer formation, via replication or recombination, is an essential step in phage development.  相似文献   

12.
Viable mutants of bacteriophage lambda having small major tail protein molecules in their virion have been isolated as pseudo-revertants of a defective prophage mutant (defK244) in gene V, which codes for the major tail protein. According to deletion mapping, the defK244 mutation is located near the translation terminal of gene V, whereas some mappable reversion mutations leading to small major tail protein molecules map upstream to defK244 but still downstream to all the amber mutations tested. This suggests (if not proves) that the removable part is located at or near the carboxyl terminal of the major tail protein. Sodium dodecyl sulfate/polyacrylamide gel electrophoresis and buoyant density measurements of the mutant phage particles show that as much as one-third of the major tail protein molecule can be removed without losing its capacity to maintain the total shape and infectivity of the phage particles. In the three-dimensional structure of the tail the removable part of the molecule exists as a protrusion at the outer part of the tail tube according to electron microscopy and hydrodynamic calculations based on sedimentation velocity experiments.  相似文献   

13.
The objective of this study was to identify loci associated with tail biting or being a victim of tail biting in Norwegian crossbred pigs using a genome-wide association study with PLINK case?Ccontrol analysis. DNA was extracted from hair or blood samples collected from 98 trios of crossbred pigs located across Norway. Each trio came from the same pen and consisted of one pig observed to initiate tail biting, one pig which was the victim of tail biting and a control pig which was not involved in either behaviour. DNA was genotyped using the Illumina PorcineSNP60 BeadChip whole-genome single-nucleotide polymorphism (SNP) assay. After quality assurance filtering, 53,952 SNPs remained comprising 74 animals (37 pairs) for the tail biter versus control comparison and 53,419 SNPs remained comprising 80 animals (40 pairs) for the victim of tail biting versus control comparison. An association with being a tail biter was observed on Sus scrofa chromosome 16 (SSC16; p?=?1.6?×?10?5) and an unassigned chromosome (p?=?3.9?×?10?5). An association with being the victim of tail biting was observed on Sus scrofa chromosomes 1 (SSC1; p?=?4.7?×?10?5), 9 (SSC9; p?=?3.9?×?10?5), 18 (SSC18; p?=?7?×?10?5 for 9,602,511?bp, p?=?3.4?×?10?5 for 9,653,881?bp and p?=?5.3?×?10?5 for 29,577,783 bp) and an unassigned chromosome (p?=?6.1?×?10?5). An r 2?=?0.96 and a D???=?1 between the two SNPs at 9?Mb on SSC18 indicated extremely high linkage disequilibrium, suggesting that these two markers represent a single locus. These results provide evidence of a moderate genetic association between the propensity to participate in tail-biting behaviour and the likelihood of becoming a victim of this behaviour.  相似文献   

14.
The present study was designed to analyze genetically somaclonal variants using biochemical and molecular markers. Efficient tissue culture protocol for Solanum melongena L. cv. Nirrala was developed. Maximum callus induction (100%) was observed for Murashige and Skoog (MS) media supplemented with 2.0 mg L?1 naphthalene acetic acid +0.5 mg L?1 6-benzylaminopurine; and nodal explants gave best callusing response (88.8%) as compared to internodes (88.3%) and leaves (87.7%). The best shooting was induced on nodal and internodal callus in the presence of 2.0 mg L?1 6-benzylaminopurine. Total soluble protein content of callus and regenerated variant plants was estimated for biochemical analysis, and largest amount of soluble protein was found in callus (6.54 mg g?1 fresh tissue) followed by variant plant grown on 2.0 mg L?1 6-benzylaminopurine (5.96 mg g?1 fresh tissue). Random amplification of polymorphic DNA technique was done with five decamer primers (OPC1-OPC5) and maximum polymorphism was detected by OPC 2 (26.99%) among all samples, whereas nodal callus on media containing 1.0 mg L?1 naphthalene acetic acid +1.0 mg L?1 6-benzylaminopurine showed highest polymorphism producing 22 bands, out of which 8 bands were polymorphic. The study shows that this marker system can provide better evaluation of genetic variation induced by tissue culture.  相似文献   

15.
The flexibility of F-actin complexed with saturating amounts of myosin subfragments has been measured by the use of a dark-field light microscope and a high-sensitivity television camera. When dilute solutions of F-actin complexes were observed in the microscope, single filaments in flexural thermal motion were visible to the eye. Images of the fluctuating filaments were recorded on videotapes using the high-sensitivity camera, and these records were used for the analysis of fluctuation to calculate flexibility in the framework of statistical mechanics of thermal fluctuation in semi-flexible rods. The analysis was carried out by two different methods. In method A, we selected many filaments (the entire length appeared near focus occasionally in the limited period of 10 to 100 seconds), measured the mean square end-to-end distance 〈R2〉 of each filament during the period and also its contour length L, and calculated a parameter λ representing flexibility by the equation given by Landau & Lifshitz (1958): 〈R2〉 = [2λL ? 1 + exp(?2λL)]2. Then, we obtained a value for λ = 0.040 ± 0.010 μm?1 for the acto-heavy meromyosin filament at 24.0 °C ± 1.0 deg. C, and λ = 0.027 ± 0.005 μm?1 for the acto-tropomyosin-heavy meromyosin filament at the same temperature.In method B, still photographs were taken of the video screen to collect a great number of filaments or parts of filaments which appeared just in focus over their length, and the contour length L of each filament and the angle θ(L) between the tangents at its two ends were measured, on the basis of the assumption that the whole length of each filament was in a plane perpendicular to the direction of view. The data were treated statistically and the results were approximated with 〈cosθ(L)〉 = exp(?λL), which holds for an ensemble of filaments with flexibility λ but in two-dimensional thermal motion (Landau & Lifshitz, 1958). The λ-values obtained by this method for acto-heavy meromyosin and acto-tropomyosin-heavy meromyosin filaments were both in good agreements with those obtained by method A, confirming the reliability of our measurement.F-actin complexed with a saturating amount of myosin subfragment-1 was examined by method B, and its flexibility was shown to be little different from that of acto-heavy meromyosin filaments.  相似文献   

16.
The right operator in bacteriophage lambda vs326 has one-twentieth the in vitro binding affinity for repressor as λv+; for comparison λv3 has one-quarter the affinity of λv+. In vivo, both mutants constitutively express genes in the right operon. Both λv3 and λvs326 express gene O constitutively because they complement λimm434Oam? in a λ lysogen, vs, more efficiently than v3. The v3 allele in cis (but not in trans) to vs326 gives significantly greater phage yields in a λ lysogen than λvs326 alone, cro gene function, measured by arrest of exonuclease synthesis, suggested the following series of increasing degree of conatitutivity: v3, vs326, v3 vs326. λv2 vs326 forms plaques on lysogens that carry λcI857, but λv2 v3 does not. These results indicate that vs326, like v3, is an operator constitutive mutation but stronger in its effects. These mutants exemplify a uniform correlation between relative weakness of repressor binding and degree of constitutive gene expression.  相似文献   

17.
The fate of D-glucose-6-phosphate and phosphoenolpyruvate in homogenates of tail and claw muscles of the lobster (H vulgaris) has been studied. With both substrates oxygen utilization is higher for the claw than for the tail muscle. Succinate is not an end product of anaerobic D-glucose-6-phosphate-U- 14C degradation in either muscle but L-lactate is the major product of such catabolism in tail muscle whereas both L-lactate and L-alanine are produced in claw muscle. Dihydroxyacetone phosphate production was observed both tissues: this can be related to the known high lipid content of these tissues.  相似文献   

18.
The collar and whiskers of bacteriophage T4 extend outward from the top of the tail and play a role in regulating retraction of the tail fibers (Conley &; Wood, 1975). The collar and whiskers also are required for efficient tail fiber attachment during phage assembly. The structural gene for the collar/whisker protein is called wac. In vitro, infected-cell extracts that contain tail fibers activate whiskerless (wac) tail fiberless particles and ordinary (wac+) tail fiberless particles at equal rates if the extracts contain the wac+ gene product. However, extracts that contain tail fibers but no wac+ gene product activate wac particles about ten times more slowly. In vivo, whiskers are not essential for plaque formation, but a wac mutation causes a delay in the appearance of intracellular phage and a fivefold decrease in the burst size of infectious particles.The effect of the whiskers on tail fiber attachment is due to an interaction between the whisker and the distal half of the tail fiber, similar if not identical to the interaction that controls tail fiber retraction in complete phage. The following observations support this view: a slow rate of in vitro tail fiber attachment similar to that described above is seen with wac+ particles when they are pretreated with anti-whisker serum, or when the tail fibers carry a mutational alteration in gp36, a structural protein in the distal half fiber near the central kink. Lack of whiskers does not affect the slow rate of attachment of proximal half fibers to the baseplate of fiberless particles, but lack of whiskers greatly decreases the rate at which particles with attached proximal half fibers are activated by addition of distal half fibers. Since whiskers normally are attached to the phage only after head—tail union (Coombs &; Eiserling, 1977; Terzaghi et al., 1978), these findings explain why tail fibers do not attach efficiently to the baseplates of free tails.  相似文献   

19.
Gene 2 amber mutants of bacteriophage T4 grown on su? hosts produce whole particles of which less than 0.5% are infective on su+ hosts. Although the DNA of such particles is full-sized and un-nicked, it is degraded to acid-soluble fragments after infection of exo V+ hosts. This breakdown does not occur on exo V? deficient hosts, and such hosts are fully permissive for gene 2-defective particles. We have now determined that giant-headed, gene 2-defective particles containing several genome lengths of DNA per head are fully infective on exo V+ hosts even though part of the parental DNA is degraded to acid-soluble fragments early after infection. Restriction of gene 2-defective particles must therefore be due to exonucleolytic degradation of the incoming DNA. If the parental DNA is of sufficient length to enable a complete genome to survive this degradation before production of anti-exoV, such particles are now infective.  相似文献   

20.
The λdv1 plasmid forms an extensive oligomeric series of circular DNA molecules in recombination-proficient (recsu+) Escherichia coli. These rec+ [λdv1]+ strains can be typed into the following four classes according to which member of the oligomeric series is most frequent: monomer, dimer, trimer, and tetramer strains. Each of these strains forms a set of circular λdv1 DNA molecules in which most members belong to the series l, 2l, 3l, 4l, where l is the length of the most frequent circular DNA that characterizes the strain—i.e. l equals the length of the most frequent oligomer in the respective strain. In a given strain, the frequency of a molecular species decreases as its length becomes a larger multiple of l. For example, the dimer strains produce dimers, tetramers, hexamers, octomers, etc., in decreasing frequencies, which reach the limits of detection at about the hexadecamer.When recA? mutations that are absolutely defective for host recombination are introduced into each of these four strains, l retains the same values as in the parent rec+ strain, but oligomers larger than 2l are not formed, and the frequency of the 2l oligomer is much reduced. The introduction of recB? or recC? mutations, which are only partially defective for host recombination, produces a much smaller perturbation of the rec+ distributions, and rec+recA? merodiploids exhibit the rec+ phenotype with respect to both oligomerization and host recombination.The effects of rec? mutations on the distribution of λdv1 oligomers and the nature of the oligomeric series produced in rec+ cells all indicate that an intermolecular reciprocal recombination between two circular λdv1 DNAs is the principal reaction responsible for oligomerization. It is suggested that the small residual oligomerization that yields 2l oligomers in recA?cells results from aberrant segregation of the DNA strands at the termination of the replication of l-sized molecules.The inactivation of recA, but not of recB or C, also results in a marked reduction in the frequency of spontaneous curing which in recA+dv1+]hosts leads to the segregation of [λdv?]cells. However, spontaneous curing does not appear to be dependent upon the recombination reactions that yield the [λdv 1+]oligomers, since the frequency of oligomerization in recA+ hosts decreases with increasing l, whereas the frequency of curing increases with increasing l.  相似文献   

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